Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:29:59 (4002478): wrapper (7.7.26015): starting
21:29:59 (4002478): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:29:59] Arguments: --nthreads 12
[2025-06-03 21:29:59] Threads: 12
[2025-06-03 21:29:59] Checking for CVMFS
[2025-06-03 21:29:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:29:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:29:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:30:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:30:00] 2.11.5.0 1164527 32601 220968 146768 3 301 43273282 45568001 12276 130560 0 260823104 99.783 169889384 24584 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:30:00] CVMFS is ok
[2025-06-03 21:30:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:30:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:30:00] Further information can be found at the LHC@home message board.
[2025-06-03 21:30:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:30:00] Checking for apptainer binary...
[2025-06-03 21:30:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:30:00] Running /usr/bin/apptainer --version
[2025-06-03 21:30:00] apptainer version 1.4.0-1.el9
[2025-06-03 21:30:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:30:00] wns0114.triumf.lcg
[2025-06-03 21:30:00] apptainer works
[2025-06-03 21:30:00] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:30:00] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:30:00] Starting ATLAS job with PandaID=6678247889
[2025-06-03 21:30:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:33:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | found no stored workdir sizes
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | wrong length of table data, x=[1749011440.0], y=[1733.0] (must be same and length>=4)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | could have reported an average CPU frequency of 2037 MHz (4 samples)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . Timing measurements:
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . get job = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . initial setup = 3 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload setup = 6 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-in = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload execution = 19 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-out = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . log creation = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:33:32] 2025-06-04 04:32:59,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678247889/pilotlog.txt
[2025-06-03 21:33:32] 2025-06-04 04:32:59,615 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:33:32] - Log from pilotlog.txt -
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | found no stored workdir sizes
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | wrong length of table data, x=[1749011440.0], y=[1733.0] (must be same and length>=4)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | could have reported an average CPU frequency of 2037 MHz (4 samples)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . Timing measurements:
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . get job = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . initial setup = 3 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload setup = 6 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-in = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload execution = 19 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-out = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . log creation = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:33:32] 2025-06-04 04:32:59,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678247889/pilotlog.txt
[2025-06-03 21:33:32] 2025-06-04 04:32:59,616 | WARNING  | 
[2025-06-03 21:33:32] [begin log extracts]
[2025-06-03 21:33:32] - Log from pilotlog.txt -
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:33:32] 2025-06-04 04:32:59,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | found no stored workdir sizes
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:33:32] 2025-06-04 04:32:59,596 | WARNING  | wrong length of table data, x=[1749011440.0], y=[1733.0] (must be same and length>=4)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | could have reported an average CPU frequency of 2037 MHz (4 samples)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . Timing measurements:
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . get job = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . initial setup = 3 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload setup = 6 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-in = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . payload execution = 19 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . stage-out = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | . log creation = 0 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | ..............................
[2025-06-03 21:33:32] 2025-06-04 04:32:59,597 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:33:32] 2025-06-04 04:32:59,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678247889/pilotlog.txt
[2025-06-03 21:33:32] [end log extracts]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,616 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,617 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | 
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | job summary report
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | --------------------------------------------------
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | PanDA job id: 6678247889
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | task id: 45006595
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:30:50,169 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | pilot state: failed 
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | transexitcode: 65
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | exeerrorcode: 65
[2025-06-03 21:33:32] 2025-06-04 04:32:59,697 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | exitcode: 65
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | cpuconsumptiontime: 23 s
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | nevents: 0
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | neventsw: 0
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | pid: 4012850
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | pgrp: 4012850
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | corecount: 12
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | event service: False
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | sizes: {0: 2405522, 5: 2405784, 11: 2405840, 29: 2429153, 30: 2433388, 31: 2433416, 151: 2433710}
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | --------------------------------------------------
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | 
[2025-06-03 21:33:32] 2025-06-04 04:32:59,698 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:33:32] 2025-06-04 04:32:59,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:33:32] 2025-06-04 04:32:59,723 | INFO     | job 6678247889 has completed (purged errors)
[2025-06-03 21:33:32] 2025-06-04 04:32:59,723 | INFO     | overall cleanup function is called
[2025-06-03 21:33:32] 2025-06-04 04:33:00,729 | INFO     | --- collectZombieJob: --- 10, [4012850]
[2025-06-03 21:33:32] 2025-06-04 04:33:00,730 | INFO     | zombie collector waiting for pid 4012850
[2025-06-03 21:33:32] 2025-06-04 04:33:00,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:33:32] 2025-06-04 04:33:00,730 | INFO     | collected zombie processes
[2025-06-03 21:33:32] 2025-06-04 04:33:00,730 | INFO     | will attempt to kill all subprocesses of pid=4012850
[2025-06-03 21:33:32] 2025-06-04 04:33:00,977 | INFO     | process IDs to be killed: [4012850] (in reverse order)
[2025-06-03 21:33:32] 2025-06-04 04:33:01,072 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:33:32] 2025-06-04 04:33:01,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:33:32] 2025-06-04 04:33:01,086 | INFO     | did not find any defunct processes belonging to 4012850
[2025-06-03 21:33:32] 2025-06-04 04:33:01,096 | INFO     | did not find any defunct processes belonging to 4012850
[2025-06-03 21:33:32] 2025-06-04 04:33:01,096 | INFO     | ready for new job
[2025-06-03 21:33:32] 2025-06-04 04:33:01,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:33:32] 2025-06-04 04:33:01,098 | INFO     | ***************************************
[2025-06-03 21:33:32] 2025-06-04 04:33:01,098 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-03 21:33:32] 2025-06-04 04:33:01,098 | INFO     | ***************************************
[2025-06-03 21:33:32] 2025-06-04 04:33:01,098 | INFO     | 
[2025-06-03 21:33:32] 2025-06-04 04:33:01,101 | INFO     | architecture information:
[2025-06-03 21:33:32] 2025-06-04 04:33:01,101 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:33:32] 2025-06-04 04:33:01,118 | INFO     | cat /etc/os-release:
[2025-06-03 21:33:32] NAME="CentOS Linux"
[2025-06-03 21:33:32] VERSION="7 (Core)"
[2025-06-03 21:33:32] ID="centos"
[2025-06-03 21:33:32] ID_LIKE="rhel fedora"
[2025-06-03 21:33:32] VERSION_ID="7"
[2025-06-03 21:33:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:33:32] ANSI_COLOR="0;31"
[2025-06-03 21:33:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:33:32] HOME_URL="https://www.centos.org/"
[2025-06-03 21:33:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:33:32] 
[2025-06-03 21:33:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:33:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:33:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:33:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:33:32] 
[2025-06-03 21:33:32] 2025-06-04 04:33:01,118 | INFO     | ***************************************
[2025-06-03 21:33:32] 2025-06-04 04:33:01,621 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:33:32] 2025-06-04 04:33:01,642 | INFO     | sufficient remaining disk space (2025295183872 B)
[2025-06-03 21:33:32] 2025-06-04 04:33:01,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:33:32] 2025-06-04 04:33:01,644 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:33:32] 2025-06-04 04:33:01,644 | INFO     | update_server=False
[2025-06-03 21:33:32] 2025-06-04 04:33:01,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:33:32] 2025-06-04 04:33:01,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:33:32] 2025-06-04 04:33:01,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:33:32] 2025-06-04 04:33:01,645 | INFO     | aborting loop
[2025-06-03 21:33:32] 2025-06-04 04:33:01,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:33:32] 2025-06-04 04:33:02,270 | INFO     | all data control threads have been joined
[2025-06-03 21:33:32] 2025-06-04 04:33:02,407 | INFO     | all payload control threads have been joined
[2025-06-03 21:33:32] 2025-06-04 04:33:02,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:33:32] 2025-06-04 04:33:02,649 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:02,650 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:02,653 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:02,801 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:02,884 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:02,977 | INFO     | all job control threads have been joined
[2025-06-03 21:33:32] 2025-06-04 04:33:03,275 | INFO     | [data] control thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,298 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,406 | INFO     | [job] validate thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,411 | INFO     | [payload] control thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,733 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,776 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,933 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:03,983 | INFO     | [job] control thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:06,536 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:33:32] 2025-06-04 04:33:08,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944734238528)>', '<ExcThread(monitor, started 139944406255360)>']
[2025-06-03 21:33:32] 2025-06-04 04:33:13,659 | INFO     | all workflow threads have been joined
[2025-06-03 21:33:32] 2025-06-04 04:33:13,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:33:32] 2025-06-04 04:33:13,660 | INFO     | traces error code: 0
[2025-06-03 21:33:32] 2025-06-04 04:33:13,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:33:32] 2025-06-04 04:33:32,032 | INFO     | PID=4006501 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 21:33:32] 2025-06-04 04:33:32,032 | INFO     | .. there are 28 such processes running
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | CRITICAL | thread 'MainThread' is not alive
[2025-06-03 21:33:32] 2025-06-04 04:33:32,033 | INFO     | [monitor] control thread has ended
[2025-06-03 21:33:32] 2025-06-04 04:33:32,179 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:33:32] 2025-06-04 04:33:32,184 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:33:32] 2025-06-04 04:33:32,188 [wrapper] pilotpid: 4006501
[2025-06-03 21:33:32] 2025-06-04 04:33:32,192 [wrapper] Pilot exit status: 0
[2025-06-03 21:33:32] 2025-06-04 04:33:32,205 [wrapper] pandaids: 6678247889
[2025-06-03 21:33:32] 2025-06-04 04:33:32,263 [wrapper] cleanup supervisor_pilot 4006507 4006502
[2025-06-03 21:33:32] 2025-06-04 04:33:32,267 [wrapper] Test setup, not cleaning
[2025-06-03 21:33:32] 2025-06-04 04:33:32,271 [wrapper] apfmon messages muted
[2025-06-03 21:33:32] 2025-06-04 04:33:32,274 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:33:32] 2025-06-04 04:33:32,277 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:33:32]  *** Error codes and diagnostics ***
[2025-06-03 21:33:32]     "exeErrorCode": 65,
[2025-06-03 21:33:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:33:32]     "pilotErrorCode": 1305,
[2025-06-03 21:33:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:33:32]  *** Listing of results directory ***
[2025-06-03 21:33:32] total 211760
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:17 queuedata.json
[2025-06-03 21:33:32] -rwx------. 1 boinc boinc     37140 Jun  3 19:20 runpilot2-wrapper.sh
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:33:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:29 run_atlas
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:29 job.xml
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc      6597 Jun  3 21:29 init_data.xml
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc 212698225 Jun  3 21:29 EVNT.45006593._002027.pool.root.1
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:29 start_atlas.sh
[2025-06-03 21:33:32] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:29 shared
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc    564113 Jun  3 21:29 input.tar.gz
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:29 boinc_lockfile
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:30 pandaJob.out
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc    986745 Jun  3 21:30 agis_schedconf.cvmfs.json
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc   1603667 Jun  3 21:30 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:33:32] drwx------. 6 boinc boinc      4096 Jun  3 21:30 pilot3
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc       946 Jun  3 21:30 memory_monitor_summary.json
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc     20680 Jun  3 21:30 log.45006595._050566.job.log.tgz.1
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc      8347 Jun  3 21:32 heartbeat.json
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:33 boinc_mmap_file
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc        22 Jun  3 21:33 wrapper_checkpoint.txt
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc       523 Jun  3 21:33 boinc_task_state.xml
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc        95 Jun  3 21:33 pilot_heartbeat.json
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc       893 Jun  3 21:33 pilotlog.txt
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc     79867 Jun  3 21:33 log.45006595._050566.job.log.1
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc       188 Jun  3 21:33 output.list
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:33 runtime_log
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc    122880 Jun  3 21:33 result.tar.gz
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc       645 Jun  3 21:33 sWGMDmdusg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBtmKDmwZolam.diag
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:33 runtime_log.err
[2025-06-03 21:33:32] -rw-r--r--. 1 boinc boinc     21635 Jun  3 21:33 stderr.txt
[2025-06-03 21:33:32] No HITS result produced
[2025-06-03 21:33:32]  *** Contents of shared directory: ***
[2025-06-03 21:33:32] total 208408
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc 212698225 Jun  3 21:29 ATLAS.root_0
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:29 start_atlas.sh
[2025-06-03 21:33:32] -rw-r--r--. 2 boinc boinc    564113 Jun  3 21:29 input.tar.gz
[2025-06-03 21:33:32] -rw-------. 1 boinc boinc    122880 Jun  3 21:33 result.tar.gz
21:33:33 (4002478): run_atlas exited; CPU time 27.182230
21:33:33 (4002478): called boinc_finish(0)

</stderr_txt>
]]>

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