Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:27:54 (7518): wrapper (7.7.26015): starting
00:27:54 (7518): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:27:54] Arguments: --nthreads 12
[2025-06-04 00:27:54] Threads: 12
[2025-06-04 00:27:54] Checking for CVMFS
[2025-06-04 00:27:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:27:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:27:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:27:54] 2.11.2.0 2981 35155 86872 146768 3 58 18203971 20275200 1 130560 0 16088770 99.982 6685628 7952 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:27:54] CVMFS is ok
[2025-06-04 00:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:27:54] Further information can be found at the LHC@home message board.
[2025-06-04 00:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:27:54] Checking for apptainer binary...
[2025-06-04 00:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:27:54] Running /usr/bin/apptainer --version
[2025-06-04 00:27:54] apptainer version 1.3.2-1.el7
[2025-06-04 00:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:27:56] c-205-30.aglt2.org
[2025-06-04 00:27:56] apptainer works
[2025-06-04 00:27:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:27:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:27:56] Starting ATLAS job with PandaID=6678071075
[2025-06-04 00:27:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:36:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:36:05]  filetype=log
[2025-06-04 01:36:05]  guid=cca37def-e7f8-4d3c-8359-9053d39069c4
[2025-06-04 01:36:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 01:36:05]  is_altstaged=None
[2025-06-04 01:36:05]  is_tar=False
[2025-06-04 01:36:05]  lfn=log.45006595._044937.job.log.tgz.1
[2025-06-04 01:36:05]  mtime=0
[2025-06-04 01:36:05]  protocol_id=None
[2025-06-04 01:36:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:36:05]  replicas=None
[2025-06-04 01:36:05]  scope=mc23_13p6TeV
[2025-06-04 01:36:05]  status=None
[2025-06-04 01:36:05]  status_code=0
[2025-06-04 01:36:05]  storage_token=
[2025-06-04 01:36:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678071075/log.45006595._044937.job.log.tgz.1
[2025-06-04 01:36:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/e7/log.45006595._044937.job.log.tgz.1
[2025-06-04 01:36:05]  workdir=None
[2025-06-04 01:36:05] ]
[2025-06-04 01:36:05] 2025-06-04 05:35:43,745 | INFO     | transferring file log.45006595._044937.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678071075/log.45006595._044937.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:36:05] 2025-06-04 05:35:43,745 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678071075/log.45006595._044937.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._044937.job
[2025-06-04 01:36:05] 2025-06-04 05:35:43,768 | INFO     | adding to output.list: log.45006595._044937.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/e7/log.45006595._044937.job.log.tg
[2025-06-04 01:36:05] 2025-06-04 05:35:43,769 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:36:05] 2025-06-04 05:35:43,769 | INFO     | summary of transferred files:
[2025-06-04 01:36:05] 2025-06-04 05:35:43,769 | INFO     |  -- lfn=log.45006595._044937.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:36:05] 2025-06-04 05:35:43,769 | INFO     | stage-out finished correctly
[2025-06-04 01:36:05] 2025-06-04 05:35:45,257 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:36:05] 2025-06-04 05:35:45,684 | INFO     | PID=11147 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 01:36:05] 2025-06-04 05:35:46,094 | INFO     | job 6678071075 has state=finished
[2025-06-04 01:36:05] 2025-06-04 05:35:46,094 | INFO     | preparing for final server update for job 6678071075 in state='finished'
[2025-06-04 01:36:05] 2025-06-04 05:35:46,095 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:36:05] 2025-06-04 05:35:46,095 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:36:05] 2025-06-04 05:35:46,095 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:36:05] 2025-06-04 05:35:46,095 | INFO     | job 6678071075 has finished - writing final server update
[2025-06-04 01:36:05] 2025-06-04 05:35:46,096 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:36:05] 2025-06-04 05:35:46,097 | INFO     | executing command: lscpu
[2025-06-04 01:36:05] 2025-06-04 05:35:46,125 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:36:05] 2025-06-04 05:35:49,285 | WARNING  | process 17556 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:36:05] 2025-06-04 05:35:49,285 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678071075/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:36:05] 2025-06-04 05:35:49,375 | INFO     | number of running child processes to parent process 17556: 1
[2025-06-04 01:36:05] 2025-06-04 05:35:49,375 | INFO     | maximum number of monitored processes: 6
[2025-06-04 01:36:05] 2025-06-04 05:35:50,690 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 01:36:05] 2025-06-04 05:35:50,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678071075/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:36:05] 2025-06-04 05:35:50,691 | INFO     | extracted standard info from prmon json
[2025-06-04 01:36:05] 2025-06-04 05:35:50,692 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:36:05] 2025-06-04 05:35:50,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:36:05] 2025-06-04 05:35:50,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:36:05] 2025-06-04 05:35:50,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:36:05] 2025-06-04 05:35:50,695 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:36:05] 2025-06-04 05:35:50,695 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,696 | INFO     | sum of deviations: -4811042428.0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,696 | INFO     | mean x: 1749013393.0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,696 | INFO     | mean y: 2861715.779661017
[2025-06-04 01:36:05] 2025-06-04 05:35:50,696 | INFO     | -- intersect: 132169743083.0717
[2025-06-04 01:36:05] 2025-06-04 05:35:50,696 | INFO     | intersect: 132169743083.0717
[2025-06-04 01:36:05] 2025-06-04 05:35:50,697 | INFO     | chi2: 0.09981368770836846
[2025-06-04 01:36:05] 2025-06-04 05:35:50,697 | INFO     | -- intersect: 132169743083.0717
[2025-06-04 01:36:05] 2025-06-04 05:35:50,697 | INFO     | current memory leak: -75.57 B/s (using 59 data points, chi2=0.10)
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | ..............................
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | . Timing measurements:
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | . get job = 0 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | . initial setup = 2 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | . payload setup = 9 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,698 | INFO     | . stage-in = 0 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,699 | INFO     | . payload execution = 4024 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,699 | INFO     | . stage-out = 0 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,699 | INFO     | . log creation = 0 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,699 | INFO     | ..............................
[2025-06-04 01:36:05] 2025-06-04 05:35:50,782 | INFO     | 
[2025-06-04 01:36:05] 2025-06-04 05:35:50,782 | INFO     | job summary report
[2025-06-04 01:36:05] 2025-06-04 05:35:50,783 | INFO     | --------------------------------------------------
[2025-06-04 01:36:05] 2025-06-04 05:35:50,783 | INFO     | PanDA job id: 6678071075
[2025-06-04 01:36:05] 2025-06-04 05:35:50,783 | INFO     | task id: 45006595
[2025-06-04 01:36:05] 2025-06-04 05:35:50,783 | INFO     | errors: (none)
[2025-06-04 01:36:05] 2025-06-04 05:35:50,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | pilot state: finished 
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | transexitcode: 0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | exeerrorcode: 0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | exeerrordiag: 
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | exitcode: 0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,784 | INFO     | exitmsg: OK
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | cpuconsumptiontime: 42981 s
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | nevents: 400
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | neventsw: 0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | pid: 17556
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | pgrp: 17556
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | corecount: 12
[2025-06-04 01:36:05] 2025-06-04 05:35:50,785 | INFO     | event service: False
[2025-06-04 01:36:05] 2025-06-04 05:35:50,786 | INFO     | sizes: {0: 2405011, 1: 2405210, 5: 2405416, 11: 2405472, 4038: 2431179, 4039: 2440120, 4040: 2440304, 4046: 2440474}
[2025-06-04 01:36:05] 2025-06-04 05:35:50,786 | INFO     | --------------------------------------------------
[2025-06-04 01:36:05] 2025-06-04 05:35:50,786 | INFO     | 
[2025-06-04 01:36:05] 2025-06-04 05:35:50,786 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:36:05] 2025-06-04 05:35:50,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:36:05] 2025-06-04 05:35:50,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:36:05] 2025-06-04 05:35:50,814 | INFO     | job 6678071075 has completed (purged errors)
[2025-06-04 01:36:05] 2025-06-04 05:35:50,814 | INFO     | overall cleanup function is called
[2025-06-04 01:36:05] 2025-06-04 05:35:51,821 | INFO     | --- collectZombieJob: --- 10, [17556]
[2025-06-04 01:36:05] 2025-06-04 05:35:51,821 | INFO     | zombie collector waiting for pid 17556
[2025-06-04 01:36:05] 2025-06-04 05:35:51,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:36:05] 2025-06-04 05:35:51,821 | INFO     | collected zombie processes
[2025-06-04 01:36:05] 2025-06-04 05:35:51,822 | INFO     | will attempt to kill all subprocesses of pid=17556
[2025-06-04 01:36:05] 2025-06-04 05:35:51,914 | INFO     | process IDs to be killed: [17556] (in reverse order)
[2025-06-04 01:36:05] 2025-06-04 05:35:51,964 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:36:05] 2025-06-04 05:35:51,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:36:05] 2025-06-04 05:35:51,968 | INFO     | did not find any defunct processes belonging to 17556
[2025-06-04 01:36:05] 2025-06-04 05:35:51,971 | INFO     | did not find any defunct processes belonging to 17556
[2025-06-04 01:36:05] 2025-06-04 05:35:51,971 | INFO     | ready for new job
[2025-06-04 01:36:05] 2025-06-04 05:35:51,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:36:05] 2025-06-04 05:35:51,973 | INFO     | **************************************
[2025-06-04 01:36:05] 2025-06-04 05:35:51,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:36:05] 2025-06-04 05:35:51,973 | INFO     | **************************************
[2025-06-04 01:36:05] 2025-06-04 05:35:51,973 | INFO     | 
[2025-06-04 01:36:05] 2025-06-04 05:35:51,974 | INFO     | architecture information:
[2025-06-04 01:36:05] 2025-06-04 05:35:51,974 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:36:05] 2025-06-04 05:35:51,989 | INFO     | cat /etc/os-release:
[2025-06-04 01:36:05] NAME="CentOS Linux"
[2025-06-04 01:36:05] VERSION="7 (Core)"
[2025-06-04 01:36:05] ID="centos"
[2025-06-04 01:36:05] ID_LIKE="rhel fedora"
[2025-06-04 01:36:05] VERSION_ID="7"
[2025-06-04 01:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:36:05] ANSI_COLOR="0;31"
[2025-06-04 01:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:36:05] HOME_URL="https://www.centos.org/"
[2025-06-04 01:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:36:05] 
[2025-06-04 01:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:36:05] 
[2025-06-04 01:36:05] 2025-06-04 05:35:51,990 | INFO     | **************************************
[2025-06-04 01:36:05] 2025-06-04 05:35:52,492 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:36:05] 2025-06-04 05:35:52,508 | INFO     | sufficient remaining disk space (29410459648 B)
[2025-06-04 01:36:05] 2025-06-04 05:35:52,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:36:05] 2025-06-04 05:35:52,509 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:36:05] 2025-06-04 05:35:52,509 | INFO     | update_server=False
[2025-06-04 01:36:05] 2025-06-04 05:35:52,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:36:05] 2025-06-04 05:35:52,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:36:05] 2025-06-04 05:35:52,509 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:36:05] 2025-06-04 05:35:52,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:36:05] 2025-06-04 05:35:52,510 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:36:05] 2025-06-04 05:35:52,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:36:05] 2025-06-04 05:35:52,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:36:05] 2025-06-04 05:35:52,537 | INFO     | all payload control threads have been joined
[2025-06-04 01:36:05] 2025-06-04 05:35:52,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:36:05] 2025-06-04 05:35:52,884 | INFO     | aborting loop
[2025-06-04 01:36:05] 2025-06-04 05:35:52,921 | INFO     | all data control threads have been joined
[2025-06-04 01:36:05] 2025-06-04 05:35:53,513 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,514 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,543 | INFO     | [payload] control thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,797 | INFO     | all job control threads have been joined
[2025-06-04 01:36:05] 2025-06-04 05:35:53,889 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,927 | INFO     | [data] control thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,927 | INFO     | [job] validate thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:53,934 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,100 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,172 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,515 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,612 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,731 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:54,802 | INFO     | [job] control thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:55,093 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:35:55,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:36:05] 2025-06-04 05:35:59,853 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:36:05] 2025-06-04 05:36:00,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700011358016)>', '<ExcThread(monitor, started 139698844464896)>']
[2025-06-04 01:36:05] 2025-06-04 05:36:00,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:36:05] 2025-06-04 05:36:00,544 | INFO     | [monitor] control thread has ended
[2025-06-04 01:36:05] 2025-06-04 05:36:05,179 | INFO     | all workflow threads have been joined
[2025-06-04 01:36:05] 2025-06-04 05:36:05,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:36:05] 2025-06-04 05:36:05,190 | INFO     | traces error code: 0
[2025-06-04 01:36:05] 2025-06-04 05:36:05,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:36:05] 2025-06-04 05:36:05,280 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:36:05] 2025-06-04 05:36:05,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:36:05] 2025-06-04 05:36:05,287 [wrapper] pilotpid: 11147
[2025-06-04 01:36:05] 2025-06-04 05:36:05,291 [wrapper] Pilot exit status: 0
[2025-06-04 01:36:05] 2025-06-04 05:36:05,306 [wrapper] pandaids: 6678071075
[2025-06-04 01:36:05] 2025-06-04 05:36:05,346 [wrapper] cleanup supervisor_pilot 20045 11148
[2025-06-04 01:36:05] 2025-06-04 05:36:05,350 [wrapper] Test setup, not cleaning
[2025-06-04 01:36:05] 2025-06-04 05:36:05,353 [wrapper] apfmon messages muted
[2025-06-04 01:36:05] 2025-06-04 05:36:05,357 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:36:05] 2025-06-04 05:36:05,361 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:36:05]  *** Error codes and diagnostics ***
[2025-06-04 01:36:05]     "exeErrorCode": 0,
[2025-06-04 01:36:05]     "exeErrorDiag": "",
[2025-06-04 01:36:05]     "pilotErrorCode": 0,
[2025-06-04 01:36:05]     "pilotErrorDiag": "",
[2025-06-04 01:36:05]  *** Listing of results directory ***
[2025-06-04 01:36:05] total 396192
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 16:35 queuedata.json
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-04 01:36:05] -rwx------ 1 boincer umatlas     37140 Jun  3 16:37 runpilot2-wrapper.sh
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:36:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:27 run_atlas
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:27 job.xml
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas 215136402 Jun  4 00:27 EVNT.45006593._001803.pool.root.1
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:27 start_atlas.sh
[2025-06-04 01:36:05] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:27 shared
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 00:27 input.tar.gz
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:27 boinc_lockfile
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 00:27 pandaJob.out
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas    986745 Jun  4 00:28 agis_schedconf.cvmfs.json
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas   1603667 Jun  4 00:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:36:05] drwx------ 4 boincer umatlas      4096 Jun  4 00:28 pilot3
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 01:30 init_data.xml
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas        95 Jun  4 01:35 pilot_heartbeat.json
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas 185256911 Jun  4 01:35 HITS.45006595._044937.pool.root.1
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:35 boinc_task_state.xml
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas      1045 Jun  4 01:35 memory_monitor_summary.json
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas    347084 Jun  4 01:35 log.45006595._044937.job.log.tgz.1
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:35 boinc_mmap_file
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:35 wrapper_checkpoint.txt
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas      7749 Jun  4 01:35 heartbeat.json
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas      4476 Jun  4 01:36 pilotlog.txt
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas    394378 Jun  4 01:36 log.45006595._044937.job.log.1
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas       357 Jun  4 01:36 output.list
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:36 runtime_log
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas    757760 Jun  4 01:36 result.tar.gz
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 01:36 runtime_log.err
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas       659 Jun  4 01:36 8DRKDmxYng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH4lKDmhnX4in.diag
[2025-06-04 01:36:05] -rw-r--r-- 1 boincer umatlas     21311 Jun  4 01:36 stderr.txt
[2025-06-04 01:36:05] HITS file was successfully produced:
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas 185256911 Jun  4 01:35 shared/HITS.pool.root.1
[2025-06-04 01:36:05]  *** Contents of shared directory: ***
[2025-06-04 01:36:05] total 392268
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas 215136402 Jun  4 00:27 ATLAS.root_0
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:27 start_atlas.sh
[2025-06-04 01:36:05] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 00:27 input.tar.gz
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas 185256911 Jun  4 01:35 HITS.pool.root.1
[2025-06-04 01:36:05] -rw------- 1 boincer umatlas    757760 Jun  4 01:36 result.tar.gz
01:36:07 (7518): run_atlas exited; CPU time 42964.435769
01:36:07 (7518): called boinc_finish(0)

</stderr_txt>
]]>

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