Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
09:54:51 (239261): wrapper (7.7.26015): starting
09:54:51 (239261): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:54:51] Arguments: --nthreads 12
[2025-06-04 09:54:51] Threads: 12
[2025-06-04 09:54:51] Checking for CVMFS
[2025-06-04 09:54:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:54:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:54:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:54:52] 2.13.0.0 3386825 2629 47672 146783 0 55 3339591 6144001 0 130560 0 1248749 99.993 288023 2463 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 09:54:52] CVMFS is ok
[2025-06-04 09:54:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:54:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 09:54:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 09:54:52] Further information can be found at the LHC@home message board.
[2025-06-04 09:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:54:52] Checking for apptainer binary...
[2025-06-04 09:54:52] apptainer is not installed, using version from CVMFS
[2025-06-04 09:54:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:54:52] ace
[2025-06-04 09:54:52] apptainer works
[2025-06-04 09:54:52] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:54:52] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:54:52] Starting ATLAS job with PandaID=6678212438
[2025-06-04 09:54:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:01:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:01:01]  is_altstaged=None
[2025-06-04 11:01:01]  is_tar=False
[2025-06-04 11:01:01]  lfn=log.45006595._048297.job.log.tgz.1
[2025-06-04 11:01:01]  mtime=0
[2025-06-04 11:01:01]  protocol_id=None
[2025-06-04 11:01:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:01:01]  replicas=None
[2025-06-04 11:01:01]  scope=mc23_13p6TeV
[2025-06-04 11:01:01]  status=None
[2025-06-04 11:01:01]  status_code=0
[2025-06-04 11:01:01]  storage_token=
[2025-06-04 11:01:01]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678212438/log.45006595._048297.job.log.tgz.1
[2025-06-04 11:01:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c9/log.45006595._048297.job.log.tgz.1
[2025-06-04 11:01:01]  workdir=None
[2025-06-04 11:01:01] ]
[2025-06-04 11:01:01] 2025-06-04 16:00:37,067 | INFO     | transferring file log.45006595._048297.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678212438/log.45006595._048297.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 11:01:01] 2025-06-04 16:00:37,067 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678212438/log.45006595._048297.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-04 11:01:01] 2025-06-04 16:00:37,080 | INFO     | adding to output.list: log.45006595._048297.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c9/log.45006595._048297.job.log.tg
[2025-06-04 11:01:01] 2025-06-04 16:00:37,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:01:01] 2025-06-04 16:00:37,080 | INFO     | summary of transferred files:
[2025-06-04 11:01:01] 2025-06-04 16:00:37,080 | INFO     |  -- lfn=log.45006595._048297.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:01:01] 2025-06-04 16:00:37,081 | INFO     | stage-out finished correctly
[2025-06-04 11:01:01] 2025-06-04 16:00:37,225 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:01:01] 2025-06-04 16:00:38,263 | INFO     | PID=242953 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:01:01] 2025-06-04 16:00:38,342 | INFO     | job 6678212438 has state=finished
[2025-06-04 11:01:01] 2025-06-04 16:00:38,342 | INFO     | preparing for final server update for job 6678212438 in state='finished'
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | job 6678212438 has finished - writing final server update
[2025-06-04 11:01:01] 2025-06-04 16:00:38,920 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:01:01] 2025-06-04 16:00:38,922 | INFO     | executing command: lscpu
[2025-06-04 11:01:01] 2025-06-04 16:00:38,942 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:01:01] 2025-06-04 16:00:41,483 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:01:01] 2025-06-04 16:00:41,483 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678212438/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:01:01] 2025-06-04 16:00:41,484 | INFO     | extracted standard info from prmon json
[2025-06-04 11:01:01] 2025-06-04 16:00:41,484 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:01:01] 2025-06-04 16:00:41,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:01:01] 2025-06-04 16:00:41,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:01:01] 2025-06-04 16:00:41,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:01:01] 2025-06-04 16:00:41,485 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:01:01] 2025-06-04 16:00:41,485 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | sum of deviations: -9481599812.5
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | mean x: 1749050964.5
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | mean y: 2867158.1896551726
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | -- intersect: 274192355197.77646
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | intersect: 274192355197.77646
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | chi2: 0.0927426830655761
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | -- intersect: 274192355197.77646
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | current memory leak: -156.76 B/s (using 58 data points, chi2=0.09)
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | ..............................
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . Timing measurements:
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . get job = 0 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . initial setup = 3 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . payload setup = 3 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . stage-in = 0 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . payload execution = 3914 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,486 | INFO     | . stage-out = 0 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,487 | INFO     | . log creation = 0 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,487 | INFO     | ..............................
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | 
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | job summary report
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | --------------------------------------------------
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | PanDA job id: 6678212438
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | task id: 45006595
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | errors: (none)
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | pilot state: finished 
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | transexitcode: 0
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | exeerrorcode: 0
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | exeerrordiag: 
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | exitcode: 0
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | exitmsg: OK
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | cpuconsumptiontime: 42917 s
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | nevents: 400
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | neventsw: 0
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | pid: 249462
[2025-06-04 11:01:01] 2025-06-04 16:00:41,534 | INFO     | pgrp: 249462
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | corecount: 12
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | event service: False
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | sizes: {0: 2397286, 3: 2397492, 11: 2397520, 3922: 2423354, 3923: 2432365, 3927: 2432479}
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | --------------------------------------------------
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | 
[2025-06-04 11:01:01] 2025-06-04 16:00:41,535 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 11:01:01] 2025-06-04 16:00:41,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:01:01] 2025-06-04 16:00:41,550 | INFO     | job 6678212438 has completed (purged errors)
[2025-06-04 11:01:01] 2025-06-04 16:00:41,551 | INFO     | overall cleanup function is called
[2025-06-04 11:01:01] 2025-06-04 16:00:42,108 | WARNING  | process 249462 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:01:01] 2025-06-04 16:00:42,158 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:01:01] 2025-06-04 16:00:42,221 | INFO     | number of running child processes to parent process 249462: 1
[2025-06-04 11:01:01] 2025-06-04 16:00:42,221 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:01:01] 2025-06-04 16:00:42,221 | INFO     | aborting job monitoring since job object (job id=6678212438) has expired
[2025-06-04 11:01:01] 2025-06-04 16:00:42,558 | INFO     | --- collectZombieJob: --- 10, [249462]
[2025-06-04 11:01:01] 2025-06-04 16:00:42,558 | INFO     | zombie collector waiting for pid 249462
[2025-06-04 11:01:01] 2025-06-04 16:00:42,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:01:01] 2025-06-04 16:00:42,559 | INFO     | collected zombie processes
[2025-06-04 11:01:01] 2025-06-04 16:00:42,559 | INFO     | will attempt to kill all subprocesses of pid=249462
[2025-06-04 11:01:01] 2025-06-04 16:00:42,629 | INFO     | process IDs to be killed: [249462] (in reverse order)
[2025-06-04 11:01:01] 2025-06-04 16:00:42,681 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:01:01] 2025-06-04 16:00:42,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:01:01] 2025-06-04 16:00:42,684 | INFO     | did not find any defunct processes belonging to 249462
[2025-06-04 11:01:01] 2025-06-04 16:00:42,687 | INFO     | did not find any defunct processes belonging to 249462
[2025-06-04 11:01:01] 2025-06-04 16:00:42,687 | INFO     | ready for new job
[2025-06-04 11:01:01] 2025-06-04 16:00:42,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:01:01] 2025-06-04 16:00:42,688 | INFO     | **************************************
[2025-06-04 11:01:01] 2025-06-04 16:00:42,688 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:01:01] 2025-06-04 16:00:42,688 | INFO     | **************************************
[2025-06-04 11:01:01] 2025-06-04 16:00:42,688 | INFO     | 
[2025-06-04 11:01:01] 2025-06-04 16:00:42,689 | INFO     | architecture information:
[2025-06-04 11:01:01] 2025-06-04 16:00:42,690 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:01:01] 2025-06-04 16:00:42,701 | INFO     | cat /etc/os-release:
[2025-06-04 11:01:01] NAME="CentOS Linux"
[2025-06-04 11:01:01] VERSION="7 (Core)"
[2025-06-04 11:01:01] ID="centos"
[2025-06-04 11:01:01] ID_LIKE="rhel fedora"
[2025-06-04 11:01:01] VERSION_ID="7"
[2025-06-04 11:01:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:01:01] ANSI_COLOR="0;31"
[2025-06-04 11:01:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:01:01] HOME_URL="https://www.centos.org/"
[2025-06-04 11:01:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:01:01] 
[2025-06-04 11:01:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:01:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:01:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:01:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:01:01] 
[2025-06-04 11:01:01] 2025-06-04 16:00:42,702 | INFO     | **************************************
[2025-06-04 11:01:01] 2025-06-04 16:00:43,205 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | INFO     | sufficient remaining disk space (23403167744 B)
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | INFO     | update_server=False
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:01:01] 2025-06-04 16:00:43,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:01:01] 2025-06-04 16:00:43,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:01:01] 2025-06-04 16:00:43,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:01:01] 2025-06-04 16:00:43,221 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:01:01] 2025-06-04 16:00:43,221 | INFO     | will abort loop
[2025-06-04 11:01:01] 2025-06-04 16:00:43,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:01:01] 2025-06-04 16:00:43,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:01:01] 2025-06-04 16:00:43,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:01:01] 2025-06-04 16:00:43,718 | INFO     | all payload control threads have been joined
[2025-06-04 11:01:01] 2025-06-04 16:00:44,185 | INFO     | all data control threads have been joined
[2025-06-04 11:01:01] 2025-06-04 16:00:44,223 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,225 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,225 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,414 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,700 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,721 | INFO     | [payload] control thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:44,752 | INFO     | all job control threads have been joined
[2025-06-04 11:01:01] 2025-06-04 16:00:44,962 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,001 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,189 | INFO     | [data] control thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,222 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,399 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,454 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,554 | INFO     | [job] validate thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:45,758 | INFO     | [job] control thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:47,277 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:53,305 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:01:01] 2025-06-04 16:00:54,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:01:01] 2025-06-04 16:00:56,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885896582976)>', '<ExcThread(monitor, started 139884979275520)>']
[2025-06-04 11:01:01] 2025-06-04 16:00:56,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:01:01] 2025-06-04 16:00:56,281 | INFO     | [monitor] control thread has ended
[2025-06-04 11:01:01] 2025-06-04 16:01:01,218 | INFO     | all workflow threads have been joined
[2025-06-04 11:01:01] 2025-06-04 16:01:01,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:01:01] 2025-06-04 16:01:01,219 | INFO     | traces error code: 0
[2025-06-04 11:01:01] 2025-06-04 16:01:01,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:01:01] 2025-06-04 16:01:01,338 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:01:01] 2025-06-04 16:01:01,340 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:01:01] 2025-06-04 16:01:01,343 [wrapper] pilotpid: 242953
[2025-06-04 11:01:01] 2025-06-04 16:01:01,346 [wrapper] Pilot exit status: 0
[2025-06-04 11:01:01] 2025-06-04 16:01:01,354 [wrapper] pandaids: 6678212438
[2025-06-04 11:01:01] 2025-06-04 16:01:01,376 [wrapper] cleanup supervisor_pilot  260397 242954
[2025-06-04 11:01:01] 2025-06-04 16:01:01,379 [wrapper] Test setup, not cleaning
[2025-06-04 11:01:01] 2025-06-04 16:01:01,381 [wrapper] apfmon messages muted
[2025-06-04 11:01:01] 2025-06-04 16:01:01,385 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:01:01] 2025-06-04 16:01:01,387 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:01:01]  *** Error codes and diagnostics ***
[2025-06-04 11:01:01]     "exeErrorCode": 0,
[2025-06-04 11:01:01]     "exeErrorDiag": "",
[2025-06-04 11:01:01]     "pilotErrorCode": 0,
[2025-06-04 11:01:01]     "pilotErrorDiag": "",
[2025-06-04 11:01:01]  *** Listing of results directory ***
[2025-06-04 11:01:01] total 392568
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:37 pilot3.tar.gz
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:40 queuedata.json
[2025-06-04 11:01:01] -rwx------ 1 boinc boinc     37140 Jun  3 18:41 runpilot2-wrapper.sh
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:01:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:54 run_atlas
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:54 job.xml
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:54 start_atlas.sh
[2025-06-04 11:01:01] drwxrwx--x 2 boinc boinc      4096 Jun  4 09:54 shared
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc    508881 Jun  4 09:54 input.tar.gz
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc      6748 Jun  4 09:54 init_data.xml
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc 216843750 Jun  4 09:54 EVNT.45006593._000031.pool.root.1
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:54 boinc_lockfile
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc      2518 Jun  4 09:54 pandaJob.out
[2025-06-04 11:01:01] -rw------- 1 boinc boinc    987207 Jun  4 09:54 agis_schedconf.cvmfs.json
[2025-06-04 11:01:01] -rw------- 1 boinc boinc   1598969 Jun  4 09:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:01:01] drwx------ 4 boinc boinc      4096 Jun  4 09:55 pilot3
[2025-06-04 11:01:01] -rw------- 1 boinc boinc 179805266 Jun  4 11:00 HITS.45006595._048297.pool.root.1
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc       529 Jun  4 11:00 boinc_task_state.xml
[2025-06-04 11:01:01] -rw------- 1 boinc boinc      1031 Jun  4 11:00 memory_monitor_summary.json
[2025-06-04 11:01:01] -rw------- 1 boinc boinc    360938 Jun  4 11:00 log.45006595._048297.job.log.tgz.1
[2025-06-04 11:01:01] -rw------- 1 boinc boinc      7668 Jun  4 11:00 heartbeat.json
[2025-06-04 11:01:01] -rw------- 1 boinc boinc        95 Jun  4 11:00 pilot_heartbeat.json
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc      8192 Jun  4 11:00 boinc_mmap_file
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc        27 Jun  4 11:00 wrapper_checkpoint.txt
[2025-06-04 11:01:01] -rw------- 1 boinc boinc      4557 Jun  4 11:01 pilotlog.txt
[2025-06-04 11:01:01] -rw------- 1 boinc boinc    390704 Jun  4 11:01 log.45006595._048297.job.log.1
[2025-06-04 11:01:01] -rw------- 1 boinc boinc       357 Jun  4 11:01 output.list
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc       620 Jun  4 11:01 runtime_log
[2025-06-04 11:01:01] -rw------- 1 boinc boinc    768000 Jun  4 11:01 result.tar.gz
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc      8696 Jun  4 11:01 runtime_log.err
[2025-06-04 11:01:01] -rw------- 1 boinc boinc       640 Jun  4 11:01 C1kKDmWRqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOIaKDmoMtfWn.diag
[2025-06-04 11:01:01] -rw-r--r-- 1 boinc boinc     21566 Jun  4 11:01 stderr.txt
[2025-06-04 11:01:01] HITS file was successfully produced:
[2025-06-04 11:01:01] -rw------- 1 boinc boinc 179805266 Jun  4 11:00 shared/HITS.pool.root.1
[2025-06-04 11:01:01]  *** Contents of shared directory: ***
[2025-06-04 11:01:01] total 388632
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:54 start_atlas.sh
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc    508881 Jun  4 09:54 input.tar.gz
[2025-06-04 11:01:01] -rw-r--r-- 2 boinc boinc 216843750 Jun  4 09:54 ATLAS.root_0
[2025-06-04 11:01:01] -rw------- 1 boinc boinc 179805266 Jun  4 11:00 HITS.pool.root.1
[2025-06-04 11:01:01] -rw------- 1 boinc boinc    768000 Jun  4 11:01 result.tar.gz
11:01:02 (239261): run_atlas exited; CPU time 42959.137679
11:01:02 (239261): called boinc_finish(0)

</stderr_txt>
]]>

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