Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:03 (2346777): wrapper (7.7.26015): starting
16:50:03 (2346777): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 16:50:03] Arguments: --nthreads 4
[2025-06-06 16:50:03] Threads: 4
[2025-06-06 16:50:03] Checking for CVMFS
[2025-06-06 16:50:03] No cvmfs_config command found, will try listing directly
[2025-06-06 16:50:03] CVMFS is ok
[2025-06-06 16:50:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 16:50:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 16:50:03] Further information can be found at the LHC@home message board.
[2025-06-06 16:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 16:50:03] Checking for apptainer binary...
[2025-06-06 16:50:03] which: no apptainer in ((null))
[2025-06-06 16:50:03] apptainer is not installed, using version from CVMFS
[2025-06-06 16:50:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 16:50:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-06-06 16:50:03] apptainer works
[2025-06-06 16:50:03] Set ATHENA_PROC_NUMBER=4
[2025-06-06 16:50:03] Set ATHENA_CORE_NUMBER=4
[2025-06-06 16:50:03] Starting ATLAS job with PandaID=6678155323
[2025-06-06 16:50:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 18:52:27]  *** The last 200 lines of the pilot log: ***
[2025-06-06 18:52:27] 2025-06-06 16:52:05,486 | INFO     | total number of processed events: 400 (read)
[2025-06-06 18:52:27] 2025-06-06 16:52:05,488 | INFO     | executing command: lscpu
[2025-06-06 18:52:27] 2025-06-06 16:52:05,519 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 18:52:27] 2025-06-06 16:52:07,083 | WARNING  | process 2357265 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 18:52:27] 2025-06-06 16:52:07,083 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678155323/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,227 | INFO     | number of running child processes to parent process 2357265: 1
[2025-06-06 18:52:27] 2025-06-06 16:52:07,227 | INFO     | maximum number of monitored processes: 6
[2025-06-06 18:52:27] 2025-06-06 16:52:07,962 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 18:52:27] 2025-06-06 16:52:07,962 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6678155323/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,963 | INFO     | extracted standard info from prmon json
[2025-06-06 18:52:27] 2025-06-06 16:52:07,963 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 18:52:27] 2025-06-06 16:52:07,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 18:52:27] 2025-06-06 16:52:07,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 18:52:27] 2025-06-06 16:52:07,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 18:52:27] 2025-06-06 16:52:07,967 | INFO     | fitting pss+swap vs Time
[2025-06-06 18:52:27] 2025-06-06 16:52:07,967 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,968 | INFO     | sum of deviations: 2604928872.0000014
[2025-06-06 18:52:27] 2025-06-06 16:52:07,968 | INFO     | mean x: 1749225059.5
[2025-06-06 18:52:27] 2025-06-06 16:52:07,968 | INFO     | mean y: 2350052.533333333
[2025-06-06 18:52:27] 2025-06-06 16:52:07,968 | INFO     | -- intersect: -8502165075.802456
[2025-06-06 18:52:27] 2025-06-06 16:52:07,968 | INFO     | intersect: -8502165075.802456
[2025-06-06 18:52:27] 2025-06-06 16:52:07,969 | INFO     | chi2: 1.3799086494684771
[2025-06-06 18:52:27] 2025-06-06 16:52:07,969 | INFO     | sum of square deviations: 471562330.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,969 | INFO     | sum of deviations: 2485157629.0000033
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | mean x: 1749224907.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | mean y: 2349769.547826087
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | -- intersect: -9216155072.575315
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | intersect: -9216155072.575315
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | chi2: 1.380854398116835
[2025-06-06 18:52:27] 2025-06-06 16:52:07,970 | INFO     | current chi2=1.380854398116835 (change=-0.06853704763153974 %)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,971 | INFO     | right removable region: 114
[2025-06-06 18:52:27] 2025-06-06 16:52:07,971 | INFO     | sum of square deviations: 471562330.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,971 | INFO     | sum of deviations: -11171355841.000004
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | mean x: 1749225212.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | mean y: 2381939.4782608696
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | -- intersect: 41441691328.97227
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | intersect: 41441691328.97227
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | chi2: 0.06552553851290707
[2025-06-06 18:52:27] 2025-06-06 16:52:07,972 | INFO     | current chi2=0.06552553851290707 (change=95.25145823688064 %)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,973 | INFO     | sum of square deviations: 412686807.5
[2025-06-06 18:52:27] 2025-06-06 16:52:07,973 | INFO     | sum of deviations: -8782181346.0
[2025-06-06 18:52:27] 2025-06-06 16:52:07,973 | INFO     | mean x: 1749225364.5
[2025-06-06 18:52:27] 2025-06-06 16:52:07,973 | INFO     | mean y: 2375734.4545454546
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | -- intersect: 37226764997.39931
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | intersect: 37226764997.39931
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | chi2: 0.06225762920211532
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | current chi2=0.06225762920211532 (change=4.987229994528084 %)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | left removable region: 20
[2025-06-06 18:52:27] 2025-06-06 16:52:07,974 | INFO     | sum of square deviations: 257521107.5
[2025-06-06 18:52:27] 2025-06-06 16:52:07,975 | INFO     | sum of deviations: -2866548874.5000005
[2025-06-06 18:52:27] 2025-06-06 16:52:07,975 | INFO     | mean x: 1749225486.5
[2025-06-06 18:52:27] 2025-06-06 16:52:07,975 | INFO     | mean y: 2358317.9680851065
[2025-06-06 18:52:27] 2025-06-06 16:52:07,975 | INFO     | -- intersect: 19473540304.76228
[2025-06-06 18:52:27] 2025-06-06 16:52:07,975 | INFO     | intersect: 19473540304.76228
[2025-06-06 18:52:27] 2025-06-06 16:52:07,976 | INFO     | chi2: 0.03147949554404832
[2025-06-06 18:52:27] 2025-06-06 16:52:07,976 | INFO     | -- intersect: 19473540304.76228
[2025-06-06 18:52:27] 2025-06-06 16:52:07,976 | INFO     | current memory leak: -11.13 B/s (using 94 data points, chi2=0.03)
[2025-06-06 18:52:27] 2025-06-06 16:52:07,976 | INFO     | ..............................
[2025-06-06 18:52:27] 2025-06-06 16:52:07,976 | INFO     | . Timing measurements:
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . get job = 0 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . initial setup = 1 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . payload setup = 4 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . stage-in = 0 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . payload execution = 7293 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . stage-out = 0 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | . log creation = 0 s
[2025-06-06 18:52:27] 2025-06-06 16:52:07,977 | INFO     | ..............................
[2025-06-06 18:52:27] 2025-06-06 16:52:08,068 | INFO     | 
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | job summary report
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | --------------------------------------------------
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | PanDA job id: 6678155323
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | task id: 45006595
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | errors: (none)
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | pilot state: finished 
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | transexitcode: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | exeerrorcode: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | exeerrordiag: 
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | exitcode: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | exitmsg: OK
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | cpuconsumptiontime: 27963 s
[2025-06-06 18:52:27] 2025-06-06 16:52:08,069 | INFO     | nevents: 400
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | neventsw: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | pid: 2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | pgrp: 2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | corecount: 4
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | event service: False
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | sizes: {0: 2396514, 1: 2397381, 3: 2397587, 11: 2397615, 7301: 2424890, 7302: 2434037, 7305: 2434151}
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | --------------------------------------------------
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | 
[2025-06-06 18:52:27] 2025-06-06 16:52:08,070 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:52:27] 2025-06-06 16:52:08,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 18:52:27] 2025-06-06 16:52:08,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 18:52:27] 2025-06-06 16:52:08,086 | INFO     | job 6678155323 has completed (purged errors)
[2025-06-06 18:52:27] 2025-06-06 16:52:08,086 | INFO     | overall cleanup function is called
[2025-06-06 18:52:27] 2025-06-06 16:52:09,093 | INFO     | --- collectZombieJob: --- 10, [2357265]
[2025-06-06 18:52:27] 2025-06-06 16:52:09,093 | INFO     | zombie collector waiting for pid 2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:09,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 18:52:27] 2025-06-06 16:52:09,093 | INFO     | collected zombie processes
[2025-06-06 18:52:27] 2025-06-06 16:52:09,093 | INFO     | will attempt to kill all subprocesses of pid=2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:09,240 | INFO     | process IDs to be killed: [2357265] (in reverse order)
[2025-06-06 18:52:27] 2025-06-06 16:52:09,282 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 18:52:27] 2025-06-06 16:52:09,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 18:52:27] 2025-06-06 16:52:09,285 | INFO     | did not find any defunct processes belonging to 2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:09,288 | INFO     | did not find any defunct processes belonging to 2357265
[2025-06-06 18:52:27] 2025-06-06 16:52:09,289 | INFO     | ready for new job
[2025-06-06 18:52:27] 2025-06-06 16:52:09,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 18:52:27] 2025-06-06 16:52:09,290 | INFO     | **************************************
[2025-06-06 18:52:27] 2025-06-06 16:52:09,290 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 18:52:27] 2025-06-06 16:52:09,290 | INFO     | **************************************
[2025-06-06 18:52:27] 2025-06-06 16:52:09,290 | INFO     | 
[2025-06-06 18:52:27] 2025-06-06 16:52:09,291 | INFO     | architecture information:
[2025-06-06 18:52:27] 2025-06-06 16:52:09,292 | INFO     | executing command: cat /etc/os-release
[2025-06-06 18:52:27] 2025-06-06 16:52:09,300 | INFO     | cat /etc/os-release:
[2025-06-06 18:52:27] NAME="CentOS Linux"
[2025-06-06 18:52:27] VERSION="7 (Core)"
[2025-06-06 18:52:27] ID="centos"
[2025-06-06 18:52:27] ID_LIKE="rhel fedora"
[2025-06-06 18:52:27] VERSION_ID="7"
[2025-06-06 18:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 18:52:27] ANSI_COLOR="0;31"
[2025-06-06 18:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 18:52:27] HOME_URL="https://www.centos.org/"
[2025-06-06 18:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 18:52:27] 
[2025-06-06 18:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 18:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 18:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 18:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 18:52:27] 
[2025-06-06 18:52:27] 2025-06-06 16:52:09,300 | INFO     | **************************************
[2025-06-06 18:52:27] 2025-06-06 16:52:09,803 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-06 18:52:27] 2025-06-06 16:52:09,812 | INFO     | sufficient remaining disk space (1679736963072 B)
[2025-06-06 18:52:27] 2025-06-06 16:52:09,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 18:52:27] 2025-06-06 16:52:09,812 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 18:52:27] 2025-06-06 16:52:09,813 | INFO     | update_server=False
[2025-06-06 18:52:27] 2025-06-06 16:52:09,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 18:52:27] 2025-06-06 16:52:09,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:52:27] 2025-06-06 16:52:09,941 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 18:52:27] 2025-06-06 16:52:09,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 18:52:27] 2025-06-06 16:52:09,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 18:52:27] 2025-06-06 16:52:10,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 18:52:27] 2025-06-06 16:52:10,636 | INFO     | all data control threads have been joined
[2025-06-06 18:52:27] 2025-06-06 16:52:10,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 18:52:27] 2025-06-06 16:52:10,736 | INFO     | aborting loop
[2025-06-06 18:52:27] 2025-06-06 16:52:10,818 | INFO     | [job] retrieve thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:10,818 | INFO     | [job] queue monitor thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:10,870 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:10,899 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:10,918 | INFO     | all payload control threads have been joined
[2025-06-06 18:52:27] 2025-06-06 16:52:11,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 18:52:27] 2025-06-06 16:52:11,176 | INFO     | all job control threads have been joined
[2025-06-06 18:52:27] 2025-06-06 16:52:11,457 | INFO     | [job] validate thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,554 | INFO     | [payload] failed_post thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,641 | INFO     | [data] control thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,741 | INFO     | [job] job monitor thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,769 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,922 | INFO     | [payload] validate_post thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:11,924 | INFO     | [payload] control thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:12,177 | INFO     | [data] copytool_in thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:12,181 | INFO     | [job] control thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:12,572 | INFO     | [data] copytool_out thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:15,124 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:20,458 | INFO     | job.realtimelogging is not enabled
[2025-06-06 18:52:27] 2025-06-06 16:52:21,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 18:52:27] 2025-06-06 16:52:22,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23365750212416)>', '<ExcThread(monitor, started 23365513348864)>']
[2025-06-06 18:52:27] 2025-06-06 16:52:23,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 18:52:27] 2025-06-06 16:52:23,004 | INFO     | [monitor] control thread has ended
[2025-06-06 18:52:27] 2025-06-06 16:52:27,250 | INFO     | all workflow threads have been joined
[2025-06-06 18:52:27] 2025-06-06 16:52:27,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 18:52:27] 2025-06-06 16:52:27,251 | INFO     | traces error code: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:27,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 18:52:27] 2025-06-06 16:52:27,323 [wrapper] ==== pilot stdout END ====
[2025-06-06 18:52:27] 2025-06-06 16:52:27,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 18:52:27] 2025-06-06 16:52:27,327 [wrapper] pilotpid: 2350404
[2025-06-06 18:52:27] 2025-06-06 16:52:27,328 [wrapper] Pilot exit status: 0
[2025-06-06 18:52:27] 2025-06-06 16:52:27,334 [wrapper] pandaids: 6678155323
[2025-06-06 18:52:27] 2025-06-06 16:52:27,359 [wrapper] cleanup supervisor_pilot 2505112 2350405
[2025-06-06 18:52:27] 2025-06-06 16:52:27,361 [wrapper] Test setup, not cleaning
[2025-06-06 18:52:27] 2025-06-06 16:52:27,363 [wrapper] apfmon messages muted
[2025-06-06 18:52:27] 2025-06-06 16:52:27,365 [wrapper] ==== wrapper stdout END ====
[2025-06-06 18:52:27] 2025-06-06 16:52:27,366 [wrapper] ==== wrapper stderr END ====
[2025-06-06 18:52:27]  *** Error codes and diagnostics ***
[2025-06-06 18:52:27]     "exeErrorCode": 0,
[2025-06-06 18:52:27]     "exeErrorDiag": "",
[2025-06-06 18:52:27]     "pilotErrorCode": 0,
[2025-06-06 18:52:27]     "pilotErrorDiag": "",
[2025-06-06 18:52:27]  *** Listing of results directory ***
[2025-06-06 18:52:27] total 393740
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:22 pilot3.tar.gz
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:34 queuedata.json
[2025-06-06 18:52:27] -rwx------ 1 boinc boinc     37140 Jun  4 01:34 runpilot2-wrapper.sh
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc       100 Jun  6 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 18:52:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 16:48 run_atlas
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc       105 Jun  6 16:48 job.xml
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc      6421 Jun  6 16:50 init_data.xml
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc 213078038 Jun  6 16:50 EVNT.45006593._001927.pool.root.1
[2025-06-06 18:52:27] drwxrwx--x 2 boinc boinc      4096 Jun  6 16:50 shared
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc    508881 Jun  6 16:50 input.tar.gz
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:50 start_atlas.sh
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc         0 Jun  6 16:50 boinc_lockfile
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc      2525 Jun  6 16:50 pandaJob.out
[2025-06-06 18:52:27] -rw------- 1 boinc boinc    985728 Jun  6 16:50 agis_schedconf.cvmfs.json
[2025-06-06 18:52:27] -rw------- 1 boinc boinc   1598969 Jun  6 16:50 agis_ddmendpoints.agis.ALL.json
[2025-06-06 18:52:27] drwx------ 4 boinc boinc      4096 Jun  6 16:50 pilot3
[2025-06-06 18:52:27] -rw------- 1 boinc boinc 184322768 Jun  6 18:51 HITS.45006595._047991.pool.root.1
[2025-06-06 18:52:27] -rw------- 1 boinc boinc        95 Jun  6 18:51 pilot_heartbeat.json
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc       530 Jun  6 18:51 boinc_task_state.xml
[2025-06-06 18:52:27] -rw------- 1 boinc boinc      1034 Jun  6 18:52 memory_monitor_summary.json
[2025-06-06 18:52:27] -rw------- 1 boinc boinc    263621 Jun  6 18:52 log.45006595._047991.job.log.tgz.1
[2025-06-06 18:52:27] -rw------- 1 boinc boinc      7728 Jun  6 18:52 heartbeat.json
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc      8192 Jun  6 18:52 boinc_mmap_file
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc        27 Jun  6 18:52 wrapper_checkpoint.txt
[2025-06-06 18:52:27] -rw------- 1 boinc boinc      4436 Jun  6 18:52 pilotlog.txt
[2025-06-06 18:52:27] -rw------- 1 boinc boinc    713465 Jun  6 18:52 log.45006595._047991.job.log.1
[2025-06-06 18:52:27] -rw------- 1 boinc boinc       357 Jun  6 18:52 output.list
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc       620 Jun  6 18:52 runtime_log
[2025-06-06 18:52:27] -rw------- 1 boinc boinc    993280 Jun  6 18:52 result.tar.gz
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc      9025 Jun  6 18:52 runtime_log.err
[2025-06-06 18:52:27] -rw------- 1 boinc boinc       661 Jun  6 18:52 qDJKDm8Jqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmFaKDmIxGnLo.diag
[2025-06-06 18:52:27] -rw-r--r-- 1 boinc boinc     20880 Jun  6 18:52 stderr.txt
[2025-06-06 18:52:27] HITS file was successfully produced:
[2025-06-06 18:52:27] -rw------- 1 boinc boinc 184322768 Jun  6 18:51 shared/HITS.pool.root.1
[2025-06-06 18:52:27]  *** Contents of shared directory: ***
[2025-06-06 18:52:27] total 389588
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc 213078038 Jun  6 16:50 ATLAS.root_0
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc    508881 Jun  6 16:50 input.tar.gz
[2025-06-06 18:52:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 16:50 start_atlas.sh
[2025-06-06 18:52:27] -rw------- 1 boinc boinc 184322768 Jun  6 18:51 HITS.pool.root.1
[2025-06-06 18:52:27] -rw------- 1 boinc boinc    993280 Jun  6 18:52 result.tar.gz
18:52:29 (2346777): run_atlas exited; CPU time 28116.324994
18:52:29 (2346777): called boinc_finish(0)

</stderr_txt>
]]>

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