Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:02:48 (1736517): wrapper (7.7.26015): starting
01:02:48 (1736517): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:02:48] Arguments: --nthreads 12
[2025-06-04 01:02:48] Threads: 12
[2025-06-04 01:02:48] Checking for CVMFS
[2025-06-04 01:02:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:02:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:02:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:02:49] 2.12.6.0 5533 31059 459680 146768 2 197 22464525 32935937 3757 16776704 1 128534398 99.631 117559876 31774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:02:49] CVMFS is ok
[2025-06-04 01:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:02:49] Further information can be found at the LHC@home message board.
[2025-06-04 01:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:02:49] Checking for apptainer binary...
[2025-06-04 01:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:02:49] Running /usr/bin/apptainer --version
[2025-06-04 01:02:49] apptainer version 1.4.1-1.el9
[2025-06-04 01:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:02:49] c6-2-29-3.aglt2.org
[2025-06-04 01:02:49] apptainer works
[2025-06-04 01:02:49] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:02:49] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:02:49] Starting ATLAS job with PandaID=6678156047
[2025-06-04 01:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:40:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:40:25]  lfn=log.45006595._048034.job.log.tgz.1
[2025-06-04 01:40:25]  mtime=0
[2025-06-04 01:40:25]  protocol_id=None
[2025-06-04 01:40:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:40:25]  replicas=None
[2025-06-04 01:40:25]  scope=mc23_13p6TeV
[2025-06-04 01:40:25]  status=None
[2025-06-04 01:40:25]  status_code=0
[2025-06-04 01:40:25]  storage_token=
[2025-06-04 01:40:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678156047/log.45006595._048034.job.log.tgz.1
[2025-06-04 01:40:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/86/log.45006595._048034.job.log.tgz.1
[2025-06-04 01:40:25]  workdir=None
[2025-06-04 01:40:25] ]
[2025-06-04 01:40:25] 2025-06-04 05:39:56,509 | INFO     | transferring file log.45006595._048034.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678156047/log.45006595._048034.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:40:25] 2025-06-04 05:39:56,509 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678156047/log.45006595._048034.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048034.job
[2025-06-04 01:40:25] 2025-06-04 05:39:56,533 | INFO     | adding to output.list: log.45006595._048034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/86/log.45006595._048034.job.log.tg
[2025-06-04 01:40:25] 2025-06-04 05:39:56,534 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:40:25] 2025-06-04 05:39:56,534 | INFO     | summary of transferred files:
[2025-06-04 01:40:25] 2025-06-04 05:39:56,534 | INFO     |  -- lfn=log.45006595._048034.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:40:25] 2025-06-04 05:39:56,534 | INFO     | stage-out finished correctly
[2025-06-04 01:40:25] 2025-06-04 05:39:59,437 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:40:25] 2025-06-04 05:39:59,518 | INFO     | job 6678156047 has state=finished
[2025-06-04 01:40:25] 2025-06-04 05:39:59,518 | INFO     | preparing for final server update for job 6678156047 in state='finished'
[2025-06-04 01:40:25] 2025-06-04 05:39:59,519 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:40:25] 2025-06-04 05:39:59,519 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:40:25] 2025-06-04 05:39:59,519 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:40:25] 2025-06-04 05:39:59,519 | INFO     | job 6678156047 has finished - writing final server update
[2025-06-04 01:40:25] 2025-06-04 05:39:59,519 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:40:25] 2025-06-04 05:39:59,535 | INFO     | executing command: lscpu
[2025-06-04 01:40:25] 2025-06-04 05:39:59,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:40:25] 2025-06-04 05:39:59,644 | WARNING  | process 1747233 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:40:25] 2025-06-04 05:39:59,644 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678156047/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:40:25] 2025-06-04 05:39:59,780 | INFO     | number of running child processes to parent process 1747233: 1
[2025-06-04 01:40:25] 2025-06-04 05:39:59,780 | INFO     | maximum number of monitored processes: 7
[2025-06-04 01:40:25] 2025-06-04 05:40:02,283 | INFO     | monitor loop #171: job 0:6678156047 is in state 'finished'
[2025-06-04 01:40:25] 2025-06-04 05:40:02,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:40:25] 2025-06-04 05:40:04,786 | INFO     | monitor loop #172: job 0:6678156047 is in state 'finished'
[2025-06-04 01:40:25] 2025-06-04 05:40:04,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:40:25] 2025-06-04 05:40:04,955 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:40:25] 2025-06-04 05:40:04,955 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678156047/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:40:25] 2025-06-04 05:40:04,956 | INFO     | extracted standard info from prmon json
[2025-06-04 01:40:25] 2025-06-04 05:40:04,957 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:40:25] 2025-06-04 05:40:04,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:40:25] 2025-06-04 05:40:04,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:40:25] 2025-06-04 05:40:04,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:40:25] 2025-06-04 05:40:04,959 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:40:25] 2025-06-04 05:40:04,960 | INFO     | sum of square deviations: 7553630.0
[2025-06-04 01:40:25] 2025-06-04 05:40:04,960 | INFO     | sum of deviations: 1806318214.0
[2025-06-04 01:40:25] 2025-06-04 05:40:04,960 | INFO     | mean x: 1749014572.0
[2025-06-04 01:40:25] 2025-06-04 05:40:04,960 | INFO     | mean y: 2358373.6551724137
[2025-06-04 01:40:25] 2025-06-04 05:40:04,961 | INFO     | -- intersect: -418243819683.1221
[2025-06-04 01:40:25] 2025-06-04 05:40:04,961 | INFO     | intersect: -418243819683.1221
[2025-06-04 01:40:25] 2025-06-04 05:40:04,961 | INFO     | chi2: 0.6560802838733425
[2025-06-04 01:40:25] 2025-06-04 05:40:04,961 | INFO     | -- intersect: -418243819683.1221
[2025-06-04 01:40:25] 2025-06-04 05:40:04,961 | INFO     | current memory leak: 239.13 B/s (using 29 data points, chi2=0.66)
[2025-06-04 01:40:25] 2025-06-04 05:40:04,962 | INFO     | ..............................
[2025-06-04 01:40:25] 2025-06-04 05:40:04,962 | INFO     | . Timing measurements:
[2025-06-04 01:40:25] 2025-06-04 05:40:04,962 | INFO     | . get job = 0 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,962 | INFO     | . initial setup = 2 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,962 | INFO     | . payload setup = 8 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,963 | INFO     | . stage-in = 0 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,963 | INFO     | . payload execution = 2185 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,963 | INFO     | . stage-out = 0 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,963 | INFO     | . log creation = 0 s
[2025-06-04 01:40:25] 2025-06-04 05:40:04,963 | INFO     | ..............................
[2025-06-04 01:40:25] 2025-06-04 05:40:05,013 | INFO     | 
[2025-06-04 01:40:25] 2025-06-04 05:40:05,013 | INFO     | job summary report
[2025-06-04 01:40:25] 2025-06-04 05:40:05,013 | INFO     | --------------------------------------------------
[2025-06-04 01:40:25] 2025-06-04 05:40:05,013 | INFO     | PanDA job id: 6678156047
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | task id: 45006595
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | errors: (none)
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | pilot state: finished 
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | transexitcode: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | exeerrorcode: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | exeerrordiag: 
[2025-06-04 01:40:25] 2025-06-04 05:40:05,014 | INFO     | exitcode: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | exitmsg: OK
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | cpuconsumptiontime: 18977 s
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | nevents: 400
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | neventsw: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | pid: 1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | pgrp: 1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | corecount: 12
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | event service: False
[2025-06-04 01:40:25] 2025-06-04 05:40:05,015 | INFO     | sizes: {0: 2405064, 1: 2405178, 6: 2405412, 11: 2405440, 2197: 2430301, 2198: 2439242, 2201: 2439426, 2206: 2439596}
[2025-06-04 01:40:25] 2025-06-04 05:40:05,016 | INFO     | --------------------------------------------------
[2025-06-04 01:40:25] 2025-06-04 05:40:05,016 | INFO     | 
[2025-06-04 01:40:25] 2025-06-04 05:40:05,016 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:40:25] 2025-06-04 05:40:05,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:40:25] 2025-06-04 05:40:05,046 | INFO     | job 6678156047 has completed (purged errors)
[2025-06-04 01:40:25] 2025-06-04 05:40:05,046 | INFO     | overall cleanup function is called
[2025-06-04 01:40:25] 2025-06-04 05:40:06,055 | INFO     | --- collectZombieJob: --- 10, [1747233]
[2025-06-04 01:40:25] 2025-06-04 05:40:06,055 | INFO     | zombie collector waiting for pid 1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:06,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:40:25] 2025-06-04 05:40:06,055 | INFO     | collected zombie processes
[2025-06-04 01:40:25] 2025-06-04 05:40:06,056 | INFO     | will attempt to kill all subprocesses of pid=1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:06,194 | INFO     | process IDs to be killed: [1747233] (in reverse order)
[2025-06-04 01:40:25] 2025-06-04 05:40:06,255 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:40:25] 2025-06-04 05:40:06,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:40:25] 2025-06-04 05:40:06,267 | INFO     | did not find any defunct processes belonging to 1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:06,274 | INFO     | did not find any defunct processes belonging to 1747233
[2025-06-04 01:40:25] 2025-06-04 05:40:06,274 | INFO     | ready for new job
[2025-06-04 01:40:25] 2025-06-04 05:40:06,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:40:25] 2025-06-04 05:40:06,275 | INFO     | **************************************
[2025-06-04 01:40:25] 2025-06-04 05:40:06,275 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:40:25] 2025-06-04 05:40:06,275 | INFO     | **************************************
[2025-06-04 01:40:25] 2025-06-04 05:40:06,275 | INFO     | 
[2025-06-04 01:40:25] 2025-06-04 05:40:06,289 | INFO     | architecture information:
[2025-06-04 01:40:25] 2025-06-04 05:40:06,290 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:40:25] 2025-06-04 05:40:06,306 | INFO     | cat /etc/os-release:
[2025-06-04 01:40:25] NAME="CentOS Linux"
[2025-06-04 01:40:25] VERSION="7 (Core)"
[2025-06-04 01:40:25] ID="centos"
[2025-06-04 01:40:25] ID_LIKE="rhel fedora"
[2025-06-04 01:40:25] VERSION_ID="7"
[2025-06-04 01:40:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:40:25] ANSI_COLOR="0;31"
[2025-06-04 01:40:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:40:25] HOME_URL="https://www.centos.org/"
[2025-06-04 01:40:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:40:25] 
[2025-06-04 01:40:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:40:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:40:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:40:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:40:25] 
[2025-06-04 01:40:25] 2025-06-04 05:40:06,307 | INFO     | **************************************
[2025-06-04 01:40:25] 2025-06-04 05:40:06,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:40:25] 2025-06-04 05:40:06,833 | INFO     | sufficient remaining disk space (76377227264 B)
[2025-06-04 01:40:25] 2025-06-04 05:40:06,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:40:25] 2025-06-04 05:40:06,834 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:40:25] 2025-06-04 05:40:06,834 | INFO     | update_server=False
[2025-06-04 01:40:25] 2025-06-04 05:40:06,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:40:25] 2025-06-04 05:40:06,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:40:25] 2025-06-04 05:40:06,942 | INFO     | all data control threads have been joined
[2025-06-04 01:40:25] 2025-06-04 05:40:07,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:40:25] 2025-06-04 05:40:07,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:40:25] 2025-06-04 05:40:07,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:40:25] 2025-06-04 05:40:07,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:40:25] 2025-06-04 05:40:07,290 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 01:40:25] 2025-06-04 05:40:07,290 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 01:40:25] 2025-06-04 05:40:07,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:40:25] 2025-06-04 05:40:07,290 | INFO     | will abort loop
[2025-06-04 01:40:25] 2025-06-04 05:40:07,424 | INFO     | all payload control threads have been joined
[2025-06-04 01:40:25] 2025-06-04 05:40:07,524 | INFO     | all job control threads have been joined
[2025-06-04 01:40:25] 2025-06-04 05:40:07,840 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:07,840 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:07,948 | INFO     | [data] control thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,222 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,296 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,429 | INFO     | [payload] control thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,466 | INFO     | [job] validate thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,527 | INFO     | [job] control thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,586 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,613 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:08,660 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:09,002 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:09,067 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:09,099 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:10,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:40:25] 2025-06-04 05:40:14,031 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:17,653 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:40:25] 2025-06-04 05:40:18,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:40:25] 2025-06-04 05:40:20,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804579821376)>', '<ExcThread(monitor, started 139803861444352)>']
[2025-06-04 01:40:25] 2025-06-04 05:40:21,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:40:25] 2025-06-04 05:40:21,188 | INFO     | [monitor] control thread has ended
[2025-06-04 01:40:25] 2025-06-04 05:40:25,234 | INFO     | all workflow threads have been joined
[2025-06-04 01:40:25] 2025-06-04 05:40:25,234 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:40:25] 2025-06-04 05:40:25,235 | INFO     | traces error code: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:25,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:40:25] 2025-06-04 05:40:25,353 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:40:25] 2025-06-04 05:40:25,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:40:25] 2025-06-04 05:40:25,362 [wrapper] pilotpid: 1740499
[2025-06-04 01:40:25] 2025-06-04 05:40:25,366 [wrapper] Pilot exit status: 0
[2025-06-04 01:40:25] 2025-06-04 05:40:25,382 [wrapper] pandaids: 6678156047
[2025-06-04 01:40:25] 2025-06-04 05:40:25,424 [wrapper] cleanup supervisor_pilot 1797863 1740500
[2025-06-04 01:40:25] 2025-06-04 05:40:25,428 [wrapper] Test setup, not cleaning
[2025-06-04 01:40:25] 2025-06-04 05:40:25,432 [wrapper] apfmon messages muted
[2025-06-04 01:40:25] 2025-06-04 05:40:25,436 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:40:25] 2025-06-04 05:40:25,439 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:40:25]  *** Error codes and diagnostics ***
[2025-06-04 01:40:25]     "exeErrorCode": 0,
[2025-06-04 01:40:25]     "exeErrorDiag": "",
[2025-06-04 01:40:25]     "pilotErrorCode": 0,
[2025-06-04 01:40:25]     "pilotErrorDiag": "",
[2025-06-04 01:40:25]  *** Listing of results directory ***
[2025-06-04 01:40:25] total 385716
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:22 pilot3.tar.gz
[2025-06-04 01:40:25] -rwx------. 1 boincer umatlas     37140 Jun  3 19:30 runpilot2-wrapper.sh
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:30 queuedata.json
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:40:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:02 run_atlas
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:02 job.xml
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas 216098381 Jun  4 01:02 EVNT.45006593._001929.pool.root.1
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:02 start_atlas.sh
[2025-06-04 01:40:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:02 shared
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 01:02 input.tar.gz
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:02 boinc_lockfile
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas      2522 Jun  4 01:02 pandaJob.out
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas    986745 Jun  4 01:02 agis_schedconf.cvmfs.json
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:40:25] drwx------. 4 boincer umatlas      4096 Jun  4 01:03 pilot3
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 01:36 init_data.xml
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas        95 Jun  4 01:39 pilot_heartbeat.json
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas 173898732 Jun  4 01:39 HITS.45006595._048034.pool.root.1
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas       529 Jun  4 01:39 boinc_task_state.xml
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas      1025 Jun  4 01:39 memory_monitor_summary.json
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas    322465 Jun  4 01:39 log.45006595._048034.job.log.tgz.1
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas      7705 Jun  4 01:40 heartbeat.json
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:40 wrapper_checkpoint.txt
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:40 boinc_mmap_file
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas      4611 Jun  4 01:40 pilotlog.txt
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas    249396 Jun  4 01:40 log.45006595._048034.job.log.1
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas       357 Jun  4 01:40 output.list
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:40 runtime_log
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas    593920 Jun  4 01:40 result.tar.gz
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas       649 Jun  4 01:40 xLFMDm4Gqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMVmKDmJOlGdn.diag
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 01:40 runtime_log.err
[2025-06-04 01:40:25] -rw-r--r--. 1 boincer umatlas     21572 Jun  4 01:40 stderr.txt
[2025-06-04 01:40:25] HITS file was successfully produced:
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas 173898732 Jun  4 01:39 shared/HITS.pool.root.1
[2025-06-04 01:40:25]  *** Contents of shared directory: ***
[2025-06-04 01:40:25] total 381960
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas 216098381 Jun  4 01:02 ATLAS.root_0
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:02 start_atlas.sh
[2025-06-04 01:40:25] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 01:02 input.tar.gz
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas 173898732 Jun  4 01:39 HITS.pool.root.1
[2025-06-04 01:40:25] -rw-------. 1 boincer umatlas    593920 Jun  4 01:40 result.tar.gz
01:40:27 (1736517): run_atlas exited; CPU time 18997.488052
01:40:27 (1736517): called boinc_finish(0)

</stderr_txt>
]]>

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