Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:32:04 (1379970): wrapper (7.7.26015): starting
14:32:04 (1379970): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 14:32:04] Arguments: --nthreads 2
[2025-06-04 14:32:04] Threads: 2
[2025-06-04 14:32:04] Checking for CVMFS
[2025-06-04 14:32:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:32:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:32:04] 2.9.2.0 755096 2624 58368 146780 3 55 28500448 36864001 0 130560 0 1687895 99.990 606051 13282 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 14:32:04] CVMFS is ok
[2025-06-04 14:32:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:32:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:32:04] Further information can be found at the LHC@home message board.
[2025-06-04 14:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:32:04] Checking for apptainer binary...
[2025-06-04 14:32:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:32:04] Running /usr/bin/apptainer --version
[2025-06-04 14:32:04] apptainer version 1.3.6-6.1
[2025-06-04 14:32:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:32:04] thA363
[2025-06-04 14:32:04] apptainer works
[2025-06-04 14:32:04] Set ATHENA_PROC_NUMBER=2
[2025-06-04 14:32:04] Set ATHENA_CORE_NUMBER=2
[2025-06-04 14:32:05] Starting ATLAS job with PandaID=6678247772
[2025-06-04 14:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:27:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:27:10] 2025-06-04 14:26:48,232 | INFO     | monitor loop #531: job 0:6678247772 is in state 'finished'
[2025-06-04 16:27:10] 2025-06-04 14:26:48,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:27:10] 2025-06-04 14:26:48,265 | INFO     | 6871s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 16:27:10] 2025-06-04 14:26:49,413 | INFO     | PID=1383594 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 16:27:10] 2025-06-04 14:26:50,735 | INFO     | monitor loop #532: job 0:6678247772 is in state 'finished'
[2025-06-04 16:27:10] 2025-06-04 14:26:50,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,488 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:27:10] 2025-06-04 14:26:52,488 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678247772/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,488 | INFO     | extracted standard info from prmon json
[2025-06-04 16:27:10] 2025-06-04 14:26:52,488 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:27:10] 2025-06-04 14:26:52,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:27:10] 2025-06-04 14:26:52,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:27:10] 2025-06-04 14:26:52,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:27:10] 2025-06-04 14:26:52,489 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:27:10] 2025-06-04 14:26:52,489 | INFO     | sum of square deviations: 435610028.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | sum of deviations: -9313812785.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | mean x: 1749043752.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | mean y: 2388687.1875
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | -- intersect: 37398832793.918205
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | intersect: 37398832793.918205
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | chi2: 1.5591407067744227
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | sum of deviations: -8268861283.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | mean x: 1749043600.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | mean y: 2391546.186915888
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | -- intersect: 38078672228.60476
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | intersect: 38078672228.60476
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | chi2: 1.558045878726703
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | current chi2=1.558045878726703 (change=0.07021996430230168 %)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | right removable region: 106
[2025-06-04 16:27:10] 2025-06-04 14:26:52,490 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | sum of deviations: -23205775367.000004
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | mean x: 1749043905.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | mean y: 2425644.803738318
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | -- intersect: 106859916678.6493
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | intersect: 106859916678.6493
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | chi2: 0.08276237861228398
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | current chi2=0.08276237861228398 (change=94.69179540674656 %)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | sum of deviations: -19206560192.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | mean x: 1749044057.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | mean y: 2413618.3039215687
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | -- intersect: 102099452562.97346
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | intersect: 102099452562.97346
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | chi2: 0.07946105983133087
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | current chi2=0.07946105983133087 (change=3.9889123975263825 %)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | left removable region: 20
[2025-06-04 16:27:10] 2025-06-04 14:26:52,491 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | sum of deviations: -11804600257.0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | mean x: 1749044179.5
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | mean y: 2396466.093023256
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | -- intersect: 104700065082.72762
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | intersect: 104700065082.72762
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | chi2: 0.061452473486981594
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | -- intersect: 104700065082.72762
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | current memory leak: -59.86 B/s (using 86 data points, chi2=0.06)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | ..............................
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . Timing measurements:
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . get job = 0 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . initial setup = 1 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . payload setup = 8 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . stage-in = 0 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . payload execution = 6830 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . stage-out = 0 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | . log creation = 0 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,492 | INFO     | ..............................
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | 
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | job summary report
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | --------------------------------------------------
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | PanDA job id: 6678247772
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | task id: 45006595
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | errors: (none)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | pilot state: finished 
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | transexitcode: 0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | exeerrorcode: 0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | exeerrordiag: 
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | exitcode: 0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | exitmsg: OK
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | cpuconsumptiontime: 13250 s
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | nevents: 400
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | neventsw: 0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | pid: 1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | pgrp: 1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | corecount: 2
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | event service: False
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | sizes: {0: 2397343, 6: 2397549, 11: 2397577, 6842: 2424725, 6843: 2433672, 6846: 2433728, 6856: 2434026}
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | --------------------------------------------------
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | 
[2025-06-04 16:27:10] 2025-06-04 14:26:52,522 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 16:27:10] 2025-06-04 14:26:52,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | job 6678247772 has completed (purged errors)
[2025-06-04 16:27:10] 2025-06-04 14:26:52,534 | INFO     | overall cleanup function is called
[2025-06-04 16:27:10] 2025-06-04 14:26:53,540 | INFO     | --- collectZombieJob: --- 10, [1390058]
[2025-06-04 16:27:10] 2025-06-04 14:26:53,541 | INFO     | zombie collector waiting for pid 1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:53,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:27:10] 2025-06-04 14:26:53,541 | INFO     | collected zombie processes
[2025-06-04 16:27:10] 2025-06-04 14:26:53,542 | INFO     | will attempt to kill all subprocesses of pid=1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:53,577 | INFO     | process IDs to be killed: [1390058] (in reverse order)
[2025-06-04 16:27:10] 2025-06-04 14:26:53,600 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:27:10] 2025-06-04 14:26:53,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:27:10] 2025-06-04 14:26:53,601 | INFO     | did not find any defunct processes belonging to 1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:53,601 | INFO     | did not find any defunct processes belonging to 1390058
[2025-06-04 16:27:10] 2025-06-04 14:26:53,601 | INFO     | ready for new job
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | **************************************
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | **************************************
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | 
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | architecture information:
[2025-06-04 16:27:10] 2025-06-04 14:26:53,602 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:27:10] 2025-06-04 14:26:53,611 | INFO     | cat /etc/os-release:
[2025-06-04 16:27:10] NAME="CentOS Linux"
[2025-06-04 16:27:10] VERSION="7 (Core)"
[2025-06-04 16:27:10] ID="centos"
[2025-06-04 16:27:10] ID_LIKE="rhel fedora"
[2025-06-04 16:27:10] VERSION_ID="7"
[2025-06-04 16:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:27:10] ANSI_COLOR="0;31"
[2025-06-04 16:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:27:10] HOME_URL="https://www.centos.org/"
[2025-06-04 16:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:27:10] 
[2025-06-04 16:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:27:10] 
[2025-06-04 16:27:10] 2025-06-04 14:26:53,611 | INFO     | **************************************
[2025-06-04 16:27:10] 2025-06-04 14:26:54,114 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | INFO     | sufficient remaining disk space (490985226240 B)
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | INFO     | update_server=False
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:27:10] 2025-06-04 14:26:54,126 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:27:10] 2025-06-04 14:26:54,127 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:27:10] 2025-06-04 14:26:54,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:27:10] 2025-06-04 14:26:54,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:27:10] 2025-06-04 14:26:54,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:27:10] 2025-06-04 14:26:54,242 | INFO     | aborting loop
[2025-06-04 16:27:10] 2025-06-04 14:26:54,299 | INFO     | all data control threads have been joined
[2025-06-04 16:27:10] 2025-06-04 14:26:54,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:27:10] 2025-06-04 14:26:55,131 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,132 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,229 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,236 | INFO     | all payload control threads have been joined
[2025-06-04 16:27:10] 2025-06-04 14:26:55,248 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,305 | INFO     | [data] control thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,438 | INFO     | all job control threads have been joined
[2025-06-04 16:27:10] 2025-06-04 14:26:55,696 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:55,960 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,132 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,242 | INFO     | [payload] control thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,247 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,248 | INFO     | [job] validate thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,394 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,444 | INFO     | [job] control thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:56,677 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:26:58,133 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:27:04,778 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:27:10] 2025-06-04 14:27:05,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:27:10] 2025-06-04 14:27:05,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264944580416)>', '<ExcThread(monitor, started 140264228251392)>']
[2025-06-04 16:27:10] 2025-06-04 14:27:06,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:27:10] 2025-06-04 14:27:06,190 | INFO     | [monitor] control thread has ended
[2025-06-04 16:27:10] 2025-06-04 14:27:10,819 | INFO     | all workflow threads have been joined
[2025-06-04 16:27:10] 2025-06-04 14:27:10,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:27:10] 2025-06-04 14:27:10,820 | INFO     | traces error code: 0
[2025-06-04 16:27:10] 2025-06-04 14:27:10,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:27:10] 2025-06-04 14:27:10,862 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:27:10] 2025-06-04 14:27:10,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:27:10] 2025-06-04 14:27:10,867 [wrapper] pilotpid: 1383594
[2025-06-04 16:27:10] 2025-06-04 14:27:10,870 [wrapper] Pilot exit status: 0
[2025-06-04 16:27:10] 2025-06-04 14:27:10,876 [wrapper] pandaids: 6678247772
[2025-06-04 16:27:10] 2025-06-04 14:27:10,889 [wrapper] cleanup supervisor_pilot 1404821 1383595
[2025-06-04 16:27:10] 2025-06-04 14:27:10,891 [wrapper] Test setup, not cleaning
[2025-06-04 16:27:10] 2025-06-04 14:27:10,893 [wrapper] apfmon messages muted
[2025-06-04 16:27:10] 2025-06-04 14:27:10,895 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:27:10] 2025-06-04 14:27:10,897 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:27:10]  *** Error codes and diagnostics ***
[2025-06-04 16:27:10]     "exeErrorCode": 0,
[2025-06-04 16:27:10]     "exeErrorDiag": "",
[2025-06-04 16:27:10]     "pilotErrorCode": 0,
[2025-06-04 16:27:10]     "pilotErrorDiag": "",
[2025-06-04 16:27:10]  *** Listing of results directory ***
[2025-06-04 16:27:10] total 394176
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:13 queuedata.json
[2025-06-04 16:27:10] -rwx------ 1 boinc boinc     37140 Jun  4 04:15 runpilot2-wrapper.sh
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:27:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:32 run_atlas
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:32 job.xml
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc 214048253 Jun  4 14:32 EVNT.45006593._002023.pool.root.1
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc      6689 Jun  4 14:32 init_data.xml
[2025-06-04 16:27:10] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:32 shared
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc    508877 Jun  4 14:32 input.tar.gz
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:32 start_atlas.sh
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:32 boinc_lockfile
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc      2524 Jun  4 14:32 pandaJob.out
[2025-06-04 16:27:10] -rw------- 1 boinc boinc    986811 Jun  4 14:32 agis_schedconf.cvmfs.json
[2025-06-04 16:27:10] -rw------- 1 boinc boinc   1598969 Jun  4 14:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:27:10] drwx------ 4 boinc boinc      4096 Jun  4 14:32 pilot3
[2025-06-04 16:27:10] -rw------- 1 boinc boinc 184012750 Jun  4 16:26 HITS.45006595._050449.pool.root.1
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc       529 Jun  4 16:26 boinc_task_state.xml
[2025-06-04 16:27:10] -rw------- 1 boinc boinc      1015 Jun  4 16:26 memory_monitor_summary.json
[2025-06-04 16:27:10] -rw------- 1 boinc boinc    219856 Jun  4 16:26 log.45006595._050449.job.log.tgz.1
[2025-06-04 16:27:10] -rw------- 1 boinc boinc        95 Jun  4 16:26 pilot_heartbeat.json
[2025-06-04 16:27:10] -rw------- 1 boinc boinc      7655 Jun  4 16:26 heartbeat.json
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:27 boinc_mmap_file
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:27 wrapper_checkpoint.txt
[2025-06-04 16:27:10] -rw------- 1 boinc boinc      4552 Jun  4 16:27 pilotlog.txt
[2025-06-04 16:27:10] -rw------- 1 boinc boinc    651472 Jun  4 16:27 log.45006595._050449.job.log.1
[2025-06-04 16:27:10] -rw------- 1 boinc boinc       357 Jun  4 16:27 output.list
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:27 runtime_log
[2025-06-04 16:27:10] -rw------- 1 boinc boinc    890880 Jun  4 16:27 result.tar.gz
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc      8733 Jun  4 16:27 runtime_log.err
[2025-06-04 16:27:10] -rw------- 1 boinc boinc       659 Jun  4 16:27 2OzKDmZqsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQrmKDm4zIvHn.diag
[2025-06-04 16:27:10] -rw-r--r-- 1 boinc boinc     21138 Jun  4 16:27 stderr.txt
[2025-06-04 16:27:10] HITS file was successfully produced:
[2025-06-04 16:27:10] -rw------- 1 boinc boinc 184012750 Jun  4 16:26 shared/HITS.pool.root.1
[2025-06-04 16:27:10]  *** Contents of shared directory: ***
[2025-06-04 16:27:10] total 390128
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc 214048253 Jun  4 14:32 ATLAS.root_0
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc    508877 Jun  4 14:32 input.tar.gz
[2025-06-04 16:27:10] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:32 start_atlas.sh
[2025-06-04 16:27:10] -rw------- 1 boinc boinc 184012750 Jun  4 16:26 HITS.pool.root.1
[2025-06-04 16:27:10] -rw------- 1 boinc boinc    890880 Jun  4 16:27 result.tar.gz
16:27:12 (1379970): run_atlas exited; CPU time 13278.660583
16:27:12 (1379970): called boinc_finish(0)

</stderr_txt>
]]>

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