Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:29 (3695): wrapper (7.7.26015): starting
14:17:29 (3695): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:17:29] Arguments: --nthreads 8
[2025-06-04 14:17:29] Threads: 8
[2025-06-04 14:17:29] Checking for CVMFS
[2025-06-04 14:17:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:17:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:17:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:17:31] 2.11.2.0 15047 33206 91984 146780 3 57 14882052 25165825 3906 130560 0 18169103 99.821 19492422 2077 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:17:31] CVMFS is ok
[2025-06-04 14:17:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:17:31] Checking for apptainer binary...
[2025-06-04 14:17:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:17:31] Running /usr/bin/apptainer --version
[2025-06-04 14:17:31] apptainer version 1.3.2-1.el7
[2025-06-04 14:17:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:19:14] cg-vwn358.simple-grid.lan
[2025-06-04 14:19:14] apptainer works
[2025-06-04 14:19:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:19:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:19:14] Starting ATLAS job with PandaID=6678156250
[2025-06-04 14:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:44:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:44:48] 2025-06-04 16:15:18,091 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6678156250/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,091 | INFO     | extracted standard info from prmon json
[2025-06-04 18:44:48] 2025-06-04 16:15:18,091 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:44:48] 2025-06-04 16:15:18,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:44:48] 2025-06-04 16:15:18,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:44:48] 2025-06-04 16:15:18,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:44:48] 2025-06-04 16:15:18,097 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:44:48] 2025-06-04 16:15:18,097 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,099 | INFO     | sum of deviations: 33135943162.999992
[2025-06-04 18:44:48] 2025-06-04 16:15:18,099 | INFO     | mean x: 1749046891.5
[2025-06-04 18:44:48] 2025-06-04 16:15:18,100 | INFO     | mean y: 2464489.4727272727
[2025-06-04 18:44:48] 2025-06-04 16:15:18,100 | INFO     | -- intersect: -17551018237.90954
[2025-06-04 18:44:48] 2025-06-04 16:15:18,100 | INFO     | intersect: -17551018237.90954
[2025-06-04 18:44:48] 2025-06-04 16:15:18,100 | INFO     | chi2: 6.702418448359844
[2025-06-04 18:44:48] 2025-06-04 16:15:18,110 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,112 | INFO     | sum of deviations: 47233028035.00002
[2025-06-04 18:44:48] 2025-06-04 16:15:18,112 | INFO     | mean x: 1749046739.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,112 | INFO     | mean y: 2474074.3720930233
[2025-06-04 18:44:48] 2025-06-04 16:15:18,112 | INFO     | -- intersect: -26805425944.20569
[2025-06-04 18:44:48] 2025-06-04 16:15:18,112 | INFO     | intersect: -26805425944.20569
[2025-06-04 18:44:48] 2025-06-04 16:15:18,113 | INFO     | chi2: 5.993887515731576
[2025-06-04 18:44:48] 2025-06-04 16:15:18,113 | INFO     | current chi2=5.993887515731576 (change=10.571272714279036 %)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,113 | INFO     | right removable region: 214
[2025-06-04 18:44:48] 2025-06-04 16:15:18,113 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,115 | INFO     | sum of deviations: -42841877277.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,115 | INFO     | mean x: 1749047044.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,115 | INFO     | mean y: 2517098.7441860465
[2025-06-04 18:44:48] 2025-06-04 16:15:18,115 | INFO     | -- intersect: 24318149839.362003
[2025-06-04 18:44:48] 2025-06-04 16:15:18,115 | INFO     | intersect: 24318149839.362003
[2025-06-04 18:44:48] 2025-06-04 16:15:18,116 | INFO     | chi2: 1.958384737123346
[2025-06-04 18:44:48] 2025-06-04 16:15:18,116 | INFO     | current chi2=1.958384737123346 (change=70.78092404686275 %)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,116 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 18:44:48] 2025-06-04 16:15:18,118 | INFO     | sum of deviations: -71272832856.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,118 | INFO     | mean x: 1749047196.5
[2025-06-04 18:44:48] 2025-06-04 16:15:18,118 | INFO     | mean y: 2537580.380952381
[2025-06-04 18:44:48] 2025-06-04 16:15:18,118 | INFO     | -- intersect: 43413467536.19213
[2025-06-04 18:44:48] 2025-06-04 16:15:18,118 | INFO     | intersect: 43413467536.19213
[2025-06-04 18:44:48] 2025-06-04 16:15:18,119 | INFO     | chi2: 1.0206037761876412
[2025-06-04 18:44:48] 2025-06-04 16:15:18,119 | INFO     | current chi2=1.0206037761876412 (change=47.885430434532644 %)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,119 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,121 | INFO     | sum of deviations: -69786523021.00002
[2025-06-04 18:44:48] 2025-06-04 16:15:18,121 | INFO     | mean x: 1749047349.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,121 | INFO     | mean y: 2536407.4
[2025-06-04 18:44:48] 2025-06-04 16:15:18,121 | INFO     | -- intersect: 45694882189.89574
[2025-06-04 18:44:48] 2025-06-04 16:15:18,121 | INFO     | intersect: 45694882189.89574
[2025-06-04 18:44:48] 2025-06-04 16:15:18,122 | INFO     | chi2: 1.0016164078704464
[2025-06-04 18:44:48] 2025-06-04 16:15:18,122 | INFO     | current chi2=1.0016164078704464 (change=1.860405454124436 %)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,122 | INFO     | left removable region: 30
[2025-06-04 18:44:48] 2025-06-04 16:15:18,130 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,132 | INFO     | sum of deviations: -35563608505.49999
[2025-06-04 18:44:48] 2025-06-04 16:15:18,132 | INFO     | mean x: 1749047623.5
[2025-06-04 18:44:48] 2025-06-04 16:15:18,132 | INFO     | mean y: 2532185.059782609
[2025-06-04 18:44:48] 2025-06-04 16:15:18,132 | INFO     | -- intersect: 32204943314.48237
[2025-06-04 18:44:48] 2025-06-04 16:15:18,132 | INFO     | intersect: 32204943314.48237
[2025-06-04 18:44:48] 2025-06-04 16:15:18,133 | INFO     | chi2: 0.18581412540906753
[2025-06-04 18:44:48] 2025-06-04 16:15:18,133 | INFO     | -- intersect: 32204943314.48237
[2025-06-04 18:44:48] 2025-06-04 16:15:18,133 | INFO     | current memory leak: -18.41 B/s (using 184 data points, chi2=0.19)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | ..............................
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . Timing measurements:
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . get job = 0 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . initial setup = 6 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . payload setup = 159 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . stage-in = 0 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,134 | INFO     | . payload execution = 13553 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,135 | INFO     | . stage-out = 3 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,135 | INFO     | . log creation = 1 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,135 | INFO     | ..............................
[2025-06-04 18:44:48] 2025-06-04 16:15:18,288 | INFO     | 
[2025-06-04 18:44:48] 2025-06-04 16:15:18,288 | INFO     | job summary report
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | --------------------------------------------------
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | PanDA job id: 6678156250
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | task id: 45006595
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | errors: (none)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | pilot state: finished 
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | transexitcode: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | exeerrorcode: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | exeerrordiag: 
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | exitcode: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | exitmsg: OK
[2025-06-04 18:44:48] 2025-06-04 16:15:18,289 | INFO     | cpuconsumptiontime: 49703 s
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | nevents: 400
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | neventsw: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | pid: 18018
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | pgrp: 18018
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | corecount: 8
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | event service: False
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397398, 12: 2397398, 23: 2397426, 34: 2397454, 45: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 85: 2397956, 88: 2398264, 13
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | --------------------------------------------------
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | 
[2025-06-04 18:44:48] 2025-06-04 16:15:18,290 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,364 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:44:48] 2025-06-04 16:15:18,364 | INFO     | job 6678156250 has completed (purged errors)
[2025-06-04 18:44:48] 2025-06-04 16:15:18,364 | INFO     | overall cleanup function is called
[2025-06-04 18:44:48] 2025-06-04 16:15:19,373 | INFO     | --- collectZombieJob: --- 10, [18018]
[2025-06-04 18:44:48] 2025-06-04 16:15:19,374 | INFO     | zombie collector waiting for pid 18018
[2025-06-04 18:44:48] 2025-06-04 16:15:19,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:44:48] 2025-06-04 16:15:19,374 | INFO     | collected zombie processes
[2025-06-04 18:44:48] 2025-06-04 16:15:19,374 | INFO     | will attempt to kill all subprocesses of pid=18018
[2025-06-04 18:44:48] 2025-06-04 16:15:19,494 | INFO     | process IDs to be killed: [18018] (in reverse order)
[2025-06-04 18:44:48] 2025-06-04 16:15:19,553 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:44:48] 2025-06-04 16:15:19,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:44:48] 2025-06-04 16:15:19,557 | INFO     | did not find any defunct processes belonging to 18018
[2025-06-04 18:44:48] 2025-06-04 16:15:19,560 | INFO     | did not find any defunct processes belonging to 18018
[2025-06-04 18:44:48] 2025-06-04 16:15:19,561 | INFO     | ready for new job
[2025-06-04 18:44:48] 2025-06-04 16:15:19,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:44:48] 2025-06-04 16:15:19,563 | INFO     | **************************************
[2025-06-04 18:44:48] 2025-06-04 16:15:19,563 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:44:48] 2025-06-04 16:15:19,563 | INFO     | **************************************
[2025-06-04 18:44:48] 2025-06-04 16:15:19,563 | INFO     | 
[2025-06-04 18:44:48] 2025-06-04 16:15:19,564 | INFO     | pilot is running in a VM
[2025-06-04 18:44:48] 2025-06-04 16:15:19,564 | INFO     | architecture information:
[2025-06-04 18:44:48] 2025-06-04 16:15:19,570 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:44:48] 2025-06-04 16:15:19,736 | INFO     | cat /etc/os-release:
[2025-06-04 18:44:48] NAME="CentOS Linux"
[2025-06-04 18:44:48] VERSION="7 (Core)"
[2025-06-04 18:44:48] ID="centos"
[2025-06-04 18:44:48] ID_LIKE="rhel fedora"
[2025-06-04 18:44:48] VERSION_ID="7"
[2025-06-04 18:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:44:48] ANSI_COLOR="0;31"
[2025-06-04 18:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:44:48] HOME_URL="https://www.centos.org/"
[2025-06-04 18:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:44:48] 
[2025-06-04 18:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:44:48] 
[2025-06-04 18:44:48] 2025-06-04 16:15:19,737 | INFO     | **************************************
[2025-06-04 18:44:48] 2025-06-04 16:15:20,240 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 18:44:48] 2025-06-04 16:15:20,366 | INFO     | sufficient remaining disk space (496160997376 B)
[2025-06-04 18:44:48] 2025-06-04 16:15:20,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:44:48] 2025-06-04 16:15:20,367 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:44:48] 2025-06-04 16:15:20,367 | INFO     | update_server=False
[2025-06-04 18:44:48] 2025-06-04 16:15:20,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:44:48] 2025-06-04 16:15:20,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:44:48] 2025-06-04 16:15:20,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:44:48] 2025-06-04 16:15:20,405 | INFO     | aborting loop
[2025-06-04 18:44:48] 2025-06-04 16:15:20,716 | INFO     | all data control threads have been joined
[2025-06-04 18:44:48] 2025-06-04 16:15:21,192 | INFO     | all payload control threads have been joined
[2025-06-04 18:44:48] 2025-06-04 16:15:21,211 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:44:48] 2025-06-04 16:15:21,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:44:48] 2025-06-04 16:15:21,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:44:48] 2025-06-04 16:15:21,373 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:21,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:21,411 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:21,426 | INFO     | all job control threads have been joined
[2025-06-04 18:44:48] 2025-06-04 16:15:21,709 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:21,725 | INFO     | [data] control thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:21,900 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,070 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,187 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,198 | INFO     | [payload] control thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,374 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,403 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,432 | INFO     | [job] control thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,554 | INFO     | [job] validate thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:22,923 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:23,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:44:48] 2025-06-04 16:15:23,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:44:48] 2025-06-04 16:15:24,308 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:27,217 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:44:48] 2025-06-04 16:15:27,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677582681920)>', '<ExcThread(monitor, started 139677143123712)>']
[2025-06-04 18:44:48] 2025-06-04 16:15:28,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:44:48] 2025-06-04 16:15:28,253 | INFO     | [monitor] control thread has ended
[2025-06-04 18:44:48] 2025-06-04 16:15:32,556 | INFO     | all workflow threads have been joined
[2025-06-04 18:44:48] 2025-06-04 16:15:32,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:44:48] 2025-06-04 16:15:32,557 | INFO     | traces error code: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:32,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:44:48] 2025-06-04 16:15:32,826 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:44:48] 2025-06-04 16:15:32,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:44:48] 2025-06-04 16:15:32,887 [wrapper] pilotpid: 8748
[2025-06-04 18:44:48] 2025-06-04 16:15:32,908 [wrapper] Pilot exit status: 0
[2025-06-04 18:44:48] 2025-06-04 16:15:33,303 [wrapper] pandaids: 6678156250
[2025-06-04 18:44:48] 2025-06-04 16:15:33,451 [wrapper] cleanup supervisor_pilot 20813 8749
[2025-06-04 18:44:48] 2025-06-04 16:15:33,523 [wrapper] Test setup, not cleaning
[2025-06-04 18:44:48] 2025-06-04 16:15:33,657 [wrapper] apfmon messages muted
[2025-06-04 18:44:48] 2025-06-04 16:15:33,803 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:44:48] 2025-06-04 16:15:33,886 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:44:48]  *** Error codes and diagnostics ***
[2025-06-04 18:44:48]     "exeErrorCode": 0,
[2025-06-04 18:44:48]     "exeErrorDiag": "",
[2025-06-04 18:44:48]     "pilotErrorCode": 0,
[2025-06-04 18:44:48]     "pilotErrorDiag": "",
[2025-06-04 18:44:48]  *** Listing of results directory ***
[2025-06-04 18:44:48] total 387476
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:43 queuedata.json
[2025-06-04 18:44:48] -rwx------. 1 boinc boinc     37140 Jun  4 01:43 runpilot2-wrapper.sh
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:44:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:17 run_atlas
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:17 job.xml
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc 213849285 Jun  4 14:17 EVNT.45006593._001937.pool.root.1
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc      6392 Jun  4 14:17 init_data.xml
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:17 start_atlas.sh
[2025-06-04 18:44:48] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:17 shared
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc    508879 Jun  4 14:17 input.tar.gz
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:17 boinc_lockfile
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:19 pandaJob.out
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc    986811 Jun  4 14:22 agis_schedconf.cvmfs.json
[2025-06-04 18:44:48] drwx------. 4 boinc boinc      4096 Jun  4 14:22 pilot3
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc 175972702 Jun  4 18:12 HITS.45006595._048237.pool.root.1
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:12 boinc_task_state.xml
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc      1029 Jun  4 18:13 memory_monitor_summary.json
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc   1598969 Jun  4 18:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc    371130 Jun  4 18:13 log.45006595._048237.job.log.tgz.1
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc        95 Jun  4 18:14 pilot_heartbeat.json
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc      7692 Jun  4 18:15 heartbeat.json
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc      4416 Jun  4 18:15 pilotlog.txt
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc   1192549 Jun  4 18:15 log.45006595._048237.job.log.1
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc       357 Jun  4 18:15 output.list
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:15 runtime_log
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc   1587200 Jun  4 18:15 result.tar.gz
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:15 runtime_log.err
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc       657 Jun  4 18:15 kniLDmTTqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRXmKDm6AqUUn.diag
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:44 boinc_mmap_file
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:44 wrapper_checkpoint.txt
[2025-06-04 18:44:48] -rw-r--r--. 1 boinc boinc     20513 Jun  4 18:44 stderr.txt
[2025-06-04 18:44:48] HITS file was successfully produced:
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc 175972702 Jun  4 18:12 shared/HITS.pool.root.1
[2025-06-04 18:44:48]  *** Contents of shared directory: ***
[2025-06-04 18:44:48] total 382760
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc 213849285 Jun  4 14:17 ATLAS.root_0
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:17 start_atlas.sh
[2025-06-04 18:44:48] -rw-r--r--. 2 boinc boinc    508879 Jun  4 14:17 input.tar.gz
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc 175972702 Jun  4 18:12 HITS.pool.root.1
[2025-06-04 18:44:48] -rw-------. 1 boinc boinc   1587200 Jun  4 18:15 result.tar.gz
18:44:50 (3695): run_atlas exited; CPU time 49896.010812
18:44:50 (3695): called boinc_finish(0)

</stderr_txt>
]]>

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