Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:17:02 (1151918): wrapper (7.7.26015): starting
00:17:02 (1151918): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 00:17:02] Arguments: --nthreads 10
[2025-06-04 00:17:02] Threads: 10
[2025-06-04 00:17:02] Checking for CVMFS
[2025-06-04 00:17:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:17:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:17:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:17:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:17:03] 2.12.6.0 1132017 120010 256932 146767 0 522 24327080 32935936 12523 130560 2 391351953 99.636 396661347 23180 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:17:03] CVMFS is ok
[2025-06-04 00:17:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:17:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:17:03] Further information can be found at the LHC@home message board.
[2025-06-04 00:17:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:17:03] Checking for apptainer binary...
[2025-06-04 00:17:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:17:03] Running /usr/bin/apptainer --version
[2025-06-04 00:17:03] apptainer version 1.4.1-1.el9
[2025-06-04 00:17:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:17:03] c-5-5.aglt2.org
[2025-06-04 00:17:03] apptainer works
[2025-06-04 00:17:03] Set ATHENA_PROC_NUMBER=10
[2025-06-04 00:17:03] Set ATHENA_CORE_NUMBER=10
[2025-06-04 00:17:03] Starting ATLAS job with PandaID=6678156053
[2025-06-04 00:17:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:08:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:08:56] 2025-06-04 06:08:42,206 | INFO     | sum of square deviations: 401599398.7522935
[2025-06-04 02:08:56] 2025-06-04 06:08:42,207 | INFO     | sum of deviations: 17171126431.431187
[2025-06-04 02:08:56] 2025-06-04 06:08:42,207 | INFO     | mean x: 1749013956.3486238
[2025-06-04 02:08:56] 2025-06-04 06:08:42,207 | INFO     | mean y: 2338799.5412844038
[2025-06-04 02:08:56] 2025-06-04 06:08:42,207 | INFO     | -- intersect: -74779993714.16835
[2025-06-04 02:08:56] 2025-06-04 06:08:42,207 | INFO     | intersect: -74779993714.16835
[2025-06-04 02:08:56] 2025-06-04 06:08:42,208 | INFO     | chi2: 4.287295414606872
[2025-06-04 02:08:56] 2025-06-04 06:08:42,208 | INFO     | sum of square deviations: 348834031.5384616
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | sum of deviations: 18574359255.07693
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | mean x: 1749013803.8461537
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | mean y: 2342832.1923076925
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | -- intersect: -93127362980.77164
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | intersect: -93127362980.77164
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | chi2: 4.273708676121968
[2025-06-04 02:08:56] 2025-06-04 06:08:42,209 | INFO     | current chi2=4.273708676121968 (change=0.31690698146466306 %)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,210 | INFO     | right removable region: 103
[2025-06-04 02:08:56] 2025-06-04 06:08:42,210 | INFO     | sum of square deviations: 348824028.1153839
[2025-06-04 02:08:56] 2025-06-04 06:08:42,210 | INFO     | sum of deviations: -7399670290.5769205
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | mean x: 1749014108.8653846
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | mean y: 2409410.673076923
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | -- intersect: 37104577541.39044
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | intersect: 37104577541.39044
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | chi2: 1.619069472697326
[2025-06-04 02:08:56] 2025-06-04 06:08:42,211 | INFO     | current chi2=1.619069472697326 (change=62.23564471015608 %)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,212 | INFO     | sum of square deviations: 300885957.414141
[2025-06-04 02:08:56] 2025-06-04 06:08:42,212 | INFO     | sum of deviations: -23580771845.454548
[2025-06-04 02:08:56] 2025-06-04 06:08:42,212 | INFO     | mean x: 1749014261.3838384
[2025-06-04 02:08:56] 2025-06-04 06:08:42,212 | INFO     | mean y: 2460819.090909091
[2025-06-04 02:08:56] 2025-06-04 06:08:42,212 | INFO     | -- intersect: 137074681159.9401
[2025-06-04 02:08:56] 2025-06-04 06:08:42,213 | INFO     | intersect: 137074681159.9401
[2025-06-04 02:08:56] 2025-06-04 06:08:42,213 | INFO     | chi2: 0.38358582511979056
[2025-06-04 02:08:56] 2025-06-04 06:08:42,213 | INFO     | current chi2=0.38358582511979056 (change=76.30825411829012 %)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,213 | INFO     | sum of square deviations: 257552624.13829744
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | sum of deviations: -26227467914.691486
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | mean x: 1749014413.9042554
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | mean y: 2469708.4787234045
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | -- intersect: 178110611982.24915
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | intersect: 178110611982.24915
[2025-06-04 02:08:56] 2025-06-04 06:08:42,214 | INFO     | chi2: 0.18663243511642796
[2025-06-04 02:08:56] 2025-06-04 06:08:42,215 | INFO     | current chi2=0.18663243511642796 (change=51.34532537584144 %)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,215 | INFO     | sum of square deviations: 218591465.77528036
[2025-06-04 02:08:56] 2025-06-04 06:08:42,215 | INFO     | sum of deviations: -23669424216.41573
[2025-06-04 02:08:56] 2025-06-04 06:08:42,215 | INFO     | mean x: 1749014566.4269662
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | mean y: 2459693.0898876404
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | -- intersect: 189388479804.27322
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | intersect: 189388479804.27322
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | chi2: 0.17864261815141516
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | current chi2=0.17864261815141516 (change=4.281044160426064 %)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | left removable region: 40
[2025-06-04 02:08:56] 2025-06-04 06:08:42,216 | INFO     | sum of square deviations: 77505047.65079361
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | sum of deviations: -9238348163.476194
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | mean x: 1749014993.5396826
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | mean y: 2403079.1904761903
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | -- intersect: 208479269337.77417
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | intersect: 208479269337.77417
[2025-06-04 02:08:56] 2025-06-04 06:08:42,217 | INFO     | chi2: 0.16265024667435052
[2025-06-04 02:08:56] 2025-06-04 06:08:42,218 | INFO     | -- intersect: 208479269337.77417
[2025-06-04 02:08:56] 2025-06-04 06:08:42,218 | INFO     | current memory leak: -119.20 B/s (using 63 data points, chi2=0.16)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,218 | INFO     | ..............................
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . Timing measurements:
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . get job = 0 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . initial setup = 3 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . payload setup = 7 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . stage-in = 0 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . payload execution = 6652 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . stage-out = 0 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | . log creation = 0 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,219 | INFO     | ..............................
[2025-06-04 02:08:56] 2025-06-04 06:08:42,304 | INFO     | 
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | job summary report
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | --------------------------------------------------
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | PanDA job id: 6678156053
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | task id: 45006595
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | errors: (none)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | pilot state: finished 
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | transexitcode: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | exeerrorcode: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | exeerrordiag: 
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | exitcode: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | exitmsg: OK
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | cpuconsumptiontime: 44516 s
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | nevents: 400
[2025-06-04 02:08:56] 2025-06-04 06:08:42,305 | INFO     | neventsw: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | pid: 1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | pgrp: 1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | corecount: 10
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | event service: False
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | sizes: {0: 2405133, 5: 2405339, 11: 2405395, 6663: 2432458, 6664: 2432457, 6665: 2441638, 6672: 2441752}
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | --------------------------------------------------
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | 
[2025-06-04 02:08:56] 2025-06-04 06:08:42,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:08:56] 2025-06-04 06:08:42,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:08:56] 2025-06-04 06:08:42,325 | INFO     | job 6678156053 has completed (purged errors)
[2025-06-04 02:08:56] 2025-06-04 06:08:42,325 | INFO     | overall cleanup function is called
[2025-06-04 02:08:56] 2025-06-04 06:08:43,337 | INFO     | --- collectZombieJob: --- 10, [1164375]
[2025-06-04 02:08:56] 2025-06-04 06:08:43,337 | INFO     | zombie collector waiting for pid 1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:43,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:08:56] 2025-06-04 06:08:43,337 | INFO     | collected zombie processes
[2025-06-04 02:08:56] 2025-06-04 06:08:43,338 | INFO     | will attempt to kill all subprocesses of pid=1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:43,737 | INFO     | process IDs to be killed: [1164375] (in reverse order)
[2025-06-04 02:08:56] 2025-06-04 06:08:43,855 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:08:56] 2025-06-04 06:08:43,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:08:56] 2025-06-04 06:08:43,865 | INFO     | did not find any defunct processes belonging to 1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:43,876 | INFO     | did not find any defunct processes belonging to 1164375
[2025-06-04 02:08:56] 2025-06-04 06:08:43,877 | INFO     | ready for new job
[2025-06-04 02:08:56] 2025-06-04 06:08:43,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:08:56] 2025-06-04 06:08:43,878 | INFO     | **************************************
[2025-06-04 02:08:56] 2025-06-04 06:08:43,878 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:08:56] 2025-06-04 06:08:43,878 | INFO     | **************************************
[2025-06-04 02:08:56] 2025-06-04 06:08:43,878 | INFO     | 
[2025-06-04 02:08:56] 2025-06-04 06:08:43,891 | INFO     | architecture information:
[2025-06-04 02:08:56] 2025-06-04 06:08:43,891 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:08:56] 2025-06-04 06:08:43,904 | INFO     | cat /etc/os-release:
[2025-06-04 02:08:56] NAME="CentOS Linux"
[2025-06-04 02:08:56] VERSION="7 (Core)"
[2025-06-04 02:08:56] ID="centos"
[2025-06-04 02:08:56] ID_LIKE="rhel fedora"
[2025-06-04 02:08:56] VERSION_ID="7"
[2025-06-04 02:08:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:08:56] ANSI_COLOR="0;31"
[2025-06-04 02:08:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:08:56] HOME_URL="https://www.centos.org/"
[2025-06-04 02:08:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:08:56] 
[2025-06-04 02:08:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:08:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:08:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:08:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:08:56] 
[2025-06-04 02:08:56] 2025-06-04 06:08:43,904 | INFO     | **************************************
[2025-06-04 02:08:56] 2025-06-04 06:08:44,407 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:08:56] 2025-06-04 06:08:44,422 | INFO     | sufficient remaining disk space (76597428224 B)
[2025-06-04 02:08:56] 2025-06-04 06:08:44,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:08:56] 2025-06-04 06:08:44,422 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:08:56] 2025-06-04 06:08:44,422 | INFO     | update_server=False
[2025-06-04 02:08:56] 2025-06-04 06:08:44,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:08:56] 2025-06-04 06:08:44,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:08:56] 2025-06-04 06:08:44,456 | INFO     | aborting loop
[2025-06-04 02:08:56] 2025-06-04 06:08:45,248 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:08:56] 2025-06-04 06:08:45,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:08:56] 2025-06-04 06:08:45,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:08:56] 2025-06-04 06:08:45,427 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:45,461 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:45,502 | INFO     | all data control threads have been joined
[2025-06-04 02:08:56] 2025-06-04 06:08:45,600 | INFO     | all payload control threads have been joined
[2025-06-04 02:08:56] 2025-06-04 06:08:45,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:08:56] 2025-06-04 06:08:45,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:08:56] 2025-06-04 06:08:45,956 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:45,969 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,104 | INFO     | all job control threads have been joined
[2025-06-04 02:08:56] 2025-06-04 06:08:46,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,336 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,464 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,473 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,507 | INFO     | [data] control thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,606 | INFO     | [payload] control thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:46,895 | INFO     | [job] validate thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:47,010 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:47,109 | INFO     | [job] control thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:47,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:08:56] 2025-06-04 06:08:47,611 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:48,320 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:49,684 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:08:56] 2025-06-04 06:08:51,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643922065216)>', '<ExcThread(monitor, started 139643135715072)>']
[2025-06-04 02:08:56] 2025-06-04 06:08:51,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:08:56] 2025-06-04 06:08:51,279 | INFO     | [monitor] control thread has ended
[2025-06-04 02:08:56] 2025-06-04 06:08:56,078 | INFO     | all workflow threads have been joined
[2025-06-04 02:08:56] 2025-06-04 06:08:56,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:08:56] 2025-06-04 06:08:56,079 | INFO     | traces error code: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:56,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:08:56] 2025-06-04 06:08:56,239 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:08:56] 2025-06-04 06:08:56,242 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:08:56] 2025-06-04 06:08:56,244 [wrapper] pilotpid: 1155519
[2025-06-04 02:08:56] 2025-06-04 06:08:56,247 [wrapper] Pilot exit status: 0
[2025-06-04 02:08:56] 2025-06-04 06:08:56,257 [wrapper] pandaids: 6678156053
[2025-06-04 02:08:56] 2025-06-04 06:08:56,337 [wrapper] cleanup supervisor_pilot 2086030 1155520
[2025-06-04 02:08:56] 2025-06-04 06:08:56,339 [wrapper] Test setup, not cleaning
[2025-06-04 02:08:56] 2025-06-04 06:08:56,342 [wrapper] apfmon messages muted
[2025-06-04 02:08:56] 2025-06-04 06:08:56,346 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:08:56] 2025-06-04 06:08:56,351 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:08:56]  *** Error codes and diagnostics ***
[2025-06-04 02:08:56]     "exeErrorCode": 0,
[2025-06-04 02:08:56]     "exeErrorDiag": "",
[2025-06-04 02:08:56]     "pilotErrorCode": 0,
[2025-06-04 02:08:56]     "pilotErrorDiag": "",
[2025-06-04 02:08:56]  *** Listing of results directory ***
[2025-06-04 02:08:56] total 397892
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:22 pilot3.tar.gz
[2025-06-04 02:08:56] -rwx------. 1 boincer umatlas     37140 Jun  3 19:30 runpilot2-wrapper.sh
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:30 queuedata.json
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:08:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:17 run_atlas
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:17 job.xml
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas 216098381 Jun  4 00:17 EVNT.45006593._001929.pool.root.1
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:17 start_atlas.sh
[2025-06-04 02:08:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:17 shared
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 00:17 input.tar.gz
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:17 boinc_lockfile
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 00:17 pandaJob.out
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas    986077 Jun  4 00:17 agis_schedconf.cvmfs.json
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:08:56] drwx------. 4 boincer umatlas      4096 Jun  4 00:17 pilot3
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas      6672 Jun  4 02:02 init_data.xml
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas 185564385 Jun  4 02:07 HITS.45006595._048040.pool.root.1
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas       530 Jun  4 02:08 boinc_task_state.xml
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas        95 Jun  4 02:08 pilot_heartbeat.json
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas      1038 Jun  4 02:08 memory_monitor_summary.json
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas    348281 Jun  4 02:08 log.45006595._048040.job.log.tgz.1
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas      7713 Jun  4 02:08 heartbeat.json
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:08 boinc_mmap_file
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:08 wrapper_checkpoint.txt
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas      4353 Jun  4 02:08 pilotlog.txt
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas    620956 Jun  4 02:08 log.45006595._048040.job.log.1
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas       357 Jun  4 02:08 output.list
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:08 runtime_log
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas    993280 Jun  4 02:08 result.tar.gz
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 02:08 runtime_log.err
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas       650 Jun  4 02:08 KgHMDm4Gqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOVmKDmUxkzbm.diag
[2025-06-04 02:08:56] -rw-r--r--. 1 boincer umatlas     20802 Jun  4 02:08 stderr.txt
[2025-06-04 02:08:56] HITS file was successfully produced:
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas 185564385 Jun  4 02:07 shared/HITS.pool.root.1
[2025-06-04 02:08:56]  *** Contents of shared directory: ***
[2025-06-04 02:08:56] total 393744
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas 216098381 Jun  4 00:17 ATLAS.root_0
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:17 start_atlas.sh
[2025-06-04 02:08:56] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 00:17 input.tar.gz
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas 185564385 Jun  4 02:07 HITS.pool.root.1
[2025-06-04 02:08:56] -rw-------. 1 boincer umatlas    993280 Jun  4 02:08 result.tar.gz
02:08:58 (1151918): run_atlas exited; CPU time 44782.885091
02:08:58 (1151918): called boinc_finish(0)

</stderr_txt>
]]>

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