Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:14:51 (2377235): wrapper (7.7.26015): starting
21:14:51 (2377235): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:14:51] Arguments: --nthreads 8
[2025-06-03 21:14:51] Threads: 8
[2025-06-03 21:14:51] Checking for CVMFS
[2025-06-03 21:14:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:14:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:14:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:14:52] 2.11.3.0 22626 402072 226168 146768 2 23 43557934 45568001 8067 130560 0 1898601831 99.748 1627030006 21495 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-06-03 21:14:52] CVMFS is ok
[2025-06-03 21:14:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:14:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:14:52] Further information can be found at the LHC@home message board.
[2025-06-03 21:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:14:52] Checking for apptainer binary...
[2025-06-03 21:14:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:14:52] Running /usr/bin/apptainer --version
[2025-06-03 21:14:52] apptainer version 1.3.3-1.el9
[2025-06-03 21:14:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:14:53] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0003.triumf.lcg
[2025-06-03 21:14:53] apptainer works
[2025-06-03 21:14:53] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:14:53] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:14:53] Starting ATLAS job with PandaID=6678246911
[2025-06-03 21:14:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:19:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246911/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard info from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | WARNING  | wrong length of table data, x=[1749010593.0], y=[2563.0] (must be same and length>=4)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . Timing measurements:
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . get job = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . initial setup = 4 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload setup = 21 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-in = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload execution = 35 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-out = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | . log creation = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:19:36] 2025-06-04 04:19:21,170 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246911/pilotlog.txt
[2025-06-03 21:19:36] 2025-06-04 04:19:21,273 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:19:36] - Log from pilotlog.txt -
[2025-06-03 21:19:36] 2025-06-04 04:19:21,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246911/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard info from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | WARNING  | wrong length of table data, x=[1749010593.0], y=[2563.0] (must be same and length>=4)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . Timing measurements:
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . get job = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . initial setup = 4 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload setup = 21 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-in = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload execution = 35 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-out = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | . log creation = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:19:36] 2025-06-04 04:19:21,170 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246911/pilotlog.txt
[2025-06-03 21:19:36] 2025-06-04 04:19:21,274 | WARNING  | 
[2025-06-03 21:19:36] [begin log extracts]
[2025-06-03 21:19:36] - Log from pilotlog.txt -
[2025-06-03 21:19:36] 2025-06-04 04:19:21,145 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246911/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard info from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:19:36] 2025-06-04 04:19:21,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:19:36] 2025-06-04 04:19:21,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | WARNING  | wrong length of table data, x=[1749010593.0], y=[2563.0] (must be same and length>=4)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . Timing measurements:
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . get job = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . initial setup = 4 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload setup = 21 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-in = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . payload execution = 35 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,148 | INFO     | . stage-out = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | . log creation = 0 s
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | ..............................
[2025-06-03 21:19:36] 2025-06-04 04:19:21,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:19:36] 2025-06-04 04:19:21,170 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246911/pilotlog.txt
[2025-06-03 21:19:36] [end log extracts]
[2025-06-03 21:19:36] 2025-06-04 04:19:21,274 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:19:36] 2025-06-04 04:19:21,275 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:19:36] 2025-06-04 04:19:22,000 | INFO     | 
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | job summary report
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | --------------------------------------------------
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | PanDA job id: 6678246911
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | task id: 45006595
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:16:53,459 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | pilot state: failed 
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | transexitcode: 65
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | exeerrorcode: 65
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | exitcode: 65
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:19:36] 2025-06-04 04:19:22,001 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | nevents: 0
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | neventsw: 0
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | pid: 2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | pgrp: 2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | corecount: 8
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | event service: False
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | sizes: {0: 2405181, 1: 2405181, 12: 2405209, 18: 2405443, 22: 2405471, 60: 2428868, 61: 2428972, 62: 2433235, 64: 2433263, 200: 2433433}
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | --------------------------------------------------
[2025-06-03 21:19:36] 2025-06-04 04:19:22,002 | INFO     | 
[2025-06-03 21:19:36] 2025-06-04 04:19:22,003 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:19:36] 2025-06-04 04:19:22,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:19:36] 2025-06-04 04:19:22,040 | INFO     | job 6678246911 has completed (purged errors)
[2025-06-03 21:19:36] 2025-06-04 04:19:22,040 | INFO     | overall cleanup function is called
[2025-06-03 21:19:36] 2025-06-04 04:19:23,048 | INFO     | --- collectZombieJob: --- 10, [2390903]
[2025-06-03 21:19:36] 2025-06-04 04:19:23,048 | INFO     | zombie collector waiting for pid 2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:23,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:19:36] 2025-06-04 04:19:23,048 | INFO     | collected zombie processes
[2025-06-03 21:19:36] 2025-06-04 04:19:23,049 | INFO     | will attempt to kill all subprocesses of pid=2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:23,724 | INFO     | process IDs to be killed: [2390903] (in reverse order)
[2025-06-03 21:19:36] 2025-06-04 04:19:24,074 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:19:36] 2025-06-04 04:19:24,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:19:36] 2025-06-04 04:19:24,110 | INFO     | did not find any defunct processes belonging to 2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:24,118 | INFO     | did not find any defunct processes belonging to 2390903
[2025-06-03 21:19:36] 2025-06-04 04:19:24,118 | INFO     | ready for new job
[2025-06-03 21:19:36] 2025-06-04 04:19:24,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:19:36] 2025-06-04 04:19:24,120 | INFO     | **************************************
[2025-06-03 21:19:36] 2025-06-04 04:19:24,120 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:19:36] 2025-06-04 04:19:24,120 | INFO     | **************************************
[2025-06-03 21:19:36] 2025-06-04 04:19:24,120 | INFO     | 
[2025-06-03 21:19:36] 2025-06-04 04:19:24,142 | INFO     | architecture information:
[2025-06-03 21:19:36] 2025-06-04 04:19:24,147 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:19:36] 2025-06-04 04:19:24,176 | INFO     | cat /etc/os-release:
[2025-06-03 21:19:36] NAME="CentOS Linux"
[2025-06-03 21:19:36] VERSION="7 (Core)"
[2025-06-03 21:19:36] ID="centos"
[2025-06-03 21:19:36] ID_LIKE="rhel fedora"
[2025-06-03 21:19:36] VERSION_ID="7"
[2025-06-03 21:19:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:19:36] ANSI_COLOR="0;31"
[2025-06-03 21:19:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:19:36] HOME_URL="https://www.centos.org/"
[2025-06-03 21:19:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:19:36] 
[2025-06-03 21:19:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:19:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:19:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:19:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:19:36] 
[2025-06-03 21:19:36] 2025-06-04 04:19:24,177 | INFO     | **************************************
[2025-06-03 21:19:36] 2025-06-04 04:19:24,681 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:19:36] 2025-06-04 04:19:24,859 | INFO     | sufficient remaining disk space (1220484792320 B)
[2025-06-03 21:19:36] 2025-06-04 04:19:24,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:19:36] 2025-06-04 04:19:24,860 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:19:36] 2025-06-04 04:19:24,860 | INFO     | update_server=False
[2025-06-03 21:19:36] 2025-06-04 04:19:24,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:19:36] 2025-06-04 04:19:24,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:19:36] 2025-06-04 04:19:24,861 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:19:36] 2025-06-04 04:19:24,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:19:36] 2025-06-04 04:19:24,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:19:36] 2025-06-04 04:19:24,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:19:36] 2025-06-04 04:19:24,865 | INFO     | aborting loop
[2025-06-03 21:19:36] 2025-06-04 04:19:24,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:19:36] 2025-06-04 04:19:25,058 | INFO     | all data control threads have been joined
[2025-06-03 21:19:36] 2025-06-04 04:19:25,140 | INFO     | all payload control threads have been joined
[2025-06-03 21:19:36] 2025-06-04 04:19:25,866 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:25,871 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:25,903 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:25,910 | INFO     | [job] validate thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:25,923 | INFO     | all job control threads have been joined
[2025-06-03 21:19:36] 2025-06-04 04:19:25,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,064 | INFO     | [data] control thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,131 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,146 | INFO     | [payload] control thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,424 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:19:36] 2025-06-04 04:19:26,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:19:36] 2025-06-04 04:19:26,855 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,876 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,898 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:26,929 | INFO     | [job] control thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:27,031 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:27,712 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:30,714 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:19:36] 2025-06-04 04:19:31,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433990059840)>', '<ExcThread(monitor, started 140432939935488)>']
[2025-06-03 21:19:36] 2025-06-04 04:19:31,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:19:36] 2025-06-04 04:19:31,907 | INFO     | [monitor] control thread has ended
[2025-06-03 21:19:36] 2025-06-04 04:19:36,425 | INFO     | all workflow threads have been joined
[2025-06-03 21:19:36] 2025-06-04 04:19:36,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:19:36] 2025-06-04 04:19:36,426 | INFO     | traces error code: 0
[2025-06-03 21:19:36] 2025-06-04 04:19:36,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:19:36] 2025-06-04 04:19:36,609 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:19:36] 2025-06-04 04:19:36,616 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:19:36] 2025-06-04 04:19:36,619 [wrapper] pilotpid: 2380815
[2025-06-03 21:19:36] 2025-06-04 04:19:36,623 [wrapper] Pilot exit status: 0
[2025-06-03 21:19:36] 2025-06-04 04:19:36,636 [wrapper] pandaids: 6678246911
[2025-06-03 21:19:36] 2025-06-04 04:19:36,790 [wrapper] cleanup supervisor_pilot 2380821 2380816
[2025-06-03 21:19:36] 2025-06-04 04:19:36,796 [wrapper] Test setup, not cleaning
[2025-06-03 21:19:36] 2025-06-04 04:19:36,799 [wrapper] apfmon messages muted
[2025-06-03 21:19:36] 2025-06-04 04:19:36,802 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:19:36] 2025-06-04 04:19:36,806 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:19:36]  *** Error codes and diagnostics ***
[2025-06-03 21:19:36]     "exeErrorCode": 65,
[2025-06-03 21:19:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:19:36]     "pilotErrorCode": 1305,
[2025-06-03 21:19:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:19:36]  *** Listing of results directory ***
[2025-06-03 21:19:36] total 213840
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:59 pilot3.tar.gz
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:09 queuedata.json
[2025-06-03 21:19:36] -rwx------. 1 boinc boinc     37140 Jun  3 19:09 runpilot2-wrapper.sh
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:19:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:14 run_atlas
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:14 job.xml
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc 214936700 Jun  3 21:14 EVNT.45006593._002014.pool.root.1
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc      6452 Jun  3 21:14 init_data.xml
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:14 start_atlas.sh
[2025-06-03 21:19:36] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:14 shared
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 21:14 input.tar.gz
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:14 boinc_lockfile
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:14 pandaJob.out
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc    986745 Jun  3 21:15 agis_schedconf.cvmfs.json
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc   1603667 Jun  3 21:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:19:36] drwx------. 4 boinc boinc      4096 Jun  3 21:15 pilot3
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc       524 Jun  3 21:16 boinc_task_state.xml
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc       955 Jun  3 21:16 memory_monitor_summary.json
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc     21042 Jun  3 21:17 log.45006595._050239.job.log.tgz.1
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc      8329 Jun  3 21:19 heartbeat.json
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc        95 Jun  3 21:19 pilot_heartbeat.json
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:19 boinc_mmap_file
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc        23 Jun  3 21:19 wrapper_checkpoint.txt
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc      4475 Jun  3 21:19 pilotlog.txt
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc     79402 Jun  3 21:19 log.45006595._050239.job.log.1
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc       188 Jun  3 21:19 output.list
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:19 runtime_log
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc    122880 Jun  3 21:19 result.tar.gz
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc       647 Jun  3 21:19 tFEMDmYksg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaWaKDmPuGjTn.diag
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc      8647 Jun  3 21:19 runtime_log.err
[2025-06-03 21:19:36] -rw-r--r--. 1 boinc boinc     21875 Jun  3 21:19 stderr.txt
[2025-06-03 21:19:36] No HITS result produced
[2025-06-03 21:19:36]  *** Contents of shared directory: ***
[2025-06-03 21:19:36] total 210536
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc 214936700 Jun  3 21:14 ATLAS.root_0
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:14 start_atlas.sh
[2025-06-03 21:19:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 21:14 input.tar.gz
[2025-06-03 21:19:36] -rw-------. 1 boinc boinc    122880 Jun  3 21:19 result.tar.gz
21:19:37 (2377235): run_atlas exited; CPU time 26.060132
21:19:37 (2377235): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN