Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:47:10 (2759784): wrapper (7.7.26015): starting
00:47:10 (2759784): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:47:10] Arguments: --nthreads 12
[2025-06-04 00:47:10] Threads: 12
[2025-06-04 00:47:10] Checking for CVMFS
[2025-06-04 00:47:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:47:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:47:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:47:11] 2.12.6.0 2658689 22810 479896 146768 3 70 23891655 32935937 3770 16776704 1 92216098 99.582 116666749 34441 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:47:11] CVMFS is ok
[2025-06-04 00:47:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:47:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:47:11] Further information can be found at the LHC@home message board.
[2025-06-04 00:47:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:47:11] Checking for apptainer binary...
[2025-06-04 00:47:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:47:11] Running /usr/bin/apptainer --version
[2025-06-04 00:47:11] apptainer version 1.4.1-1.el9
[2025-06-04 00:47:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:47:11] c6-5-7-2.aglt2.org
[2025-06-04 00:47:11] apptainer works
[2025-06-04 00:47:11] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:47:11] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:47:11] Starting ATLAS job with PandaID=6667201838
[2025-06-04 00:47:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:38:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:38:49]  is_tar=False
[2025-06-04 01:38:49]  lfn=log.44871837._069645.job.log.tgz.1
[2025-06-04 01:38:49]  mtime=0
[2025-06-04 01:38:49]  protocol_id=None
[2025-06-04 01:38:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:38:49]  replicas=None
[2025-06-04 01:38:49]  scope=mc23_13p6TeV
[2025-06-04 01:38:49]  status=None
[2025-06-04 01:38:49]  status_code=0
[2025-06-04 01:38:49]  storage_token=
[2025-06-04 01:38:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667201838/log.44871837._069645.job.log.tgz.1
[2025-06-04 01:38:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e5/log.44871837._069645.job.log.tgz.1
[2025-06-04 01:38:49]  workdir=None
[2025-06-04 01:38:49] ]
[2025-06-04 01:38:49] 2025-06-04 05:38:25,752 | INFO     | transferring file log.44871837._069645.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667201838/log.44871837._069645.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:38:49] 2025-06-04 05:38:25,752 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667201838/log.44871837._069645.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._069645.job
[2025-06-04 01:38:49] 2025-06-04 05:38:25,763 | INFO     | adding to output.list: log.44871837._069645.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e5/log.44871837._069645.job.log.tg
[2025-06-04 01:38:49] 2025-06-04 05:38:25,764 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:38:49] 2025-06-04 05:38:25,764 | INFO     | summary of transferred files:
[2025-06-04 01:38:49] 2025-06-04 05:38:25,764 | INFO     |  -- lfn=log.44871837._069645.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:38:49] 2025-06-04 05:38:25,764 | INFO     | stage-out finished correctly
[2025-06-04 01:38:49] 2025-06-04 05:38:26,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:38:49] 2025-06-04 05:38:28,070 | INFO     | job 6667201838 has state=finished
[2025-06-04 01:38:49] 2025-06-04 05:38:28,070 | INFO     | preparing for final server update for job 6667201838 in state='finished'
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | job 6667201838 has finished - writing final server update
[2025-06-04 01:38:49] 2025-06-04 05:38:28,132 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:38:49] 2025-06-04 05:38:28,146 | INFO     | executing command: lscpu
[2025-06-04 01:38:49] 2025-06-04 05:38:28,203 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:38:49] 2025-06-04 05:38:30,428 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:38:49] 2025-06-04 05:38:30,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667201838/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:38:49] 2025-06-04 05:38:30,429 | INFO     | extracted standard info from prmon json
[2025-06-04 01:38:49] 2025-06-04 05:38:30,429 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:38:49] 2025-06-04 05:38:30,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:38:49] 2025-06-04 05:38:30,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:38:49] 2025-06-04 05:38:30,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | sum of deviations: 445231375.0000008
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | mean x: 1749014044.0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | mean y: 2487298.88372093
[2025-06-04 01:38:49] 2025-06-04 05:38:30,430 | INFO     | -- intersect: -31600650974.43404
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | intersect: -31600650974.43404
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | chi2: 0.8938689920814836
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | -- intersect: -31600650974.43404
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | current memory leak: 18.07 B/s (using 43 data points, chi2=0.89)
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | ..............................
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . Timing measurements:
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . get job = 0 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . initial setup = 2 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . payload setup = 3 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . stage-in = 0 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . payload execution = 3046 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . stage-out = 0 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | . log creation = 0 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,431 | INFO     | ..............................
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | 
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | job summary report
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | --------------------------------------------------
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | PanDA job id: 6667201838
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | task id: 44871837
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | errors: (none)
[2025-06-04 01:38:49] 2025-06-04 05:38:30,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | pilot state: finished 
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | transexitcode: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | exeerrorcode: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | exeerrordiag: 
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | exitcode: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | exitmsg: OK
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | cpuconsumptiontime: 28203 s
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | nevents: 400
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | neventsw: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | pid: 2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | pgrp: 2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | corecount: 12
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | event service: False
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 3054: 2430804, 3055: 2439801, 3059: 2439915}
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | --------------------------------------------------
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | 
[2025-06-04 01:38:49] 2025-06-04 05:38:30,491 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:38:49] 2025-06-04 05:38:30,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | job 6667201838 has completed (purged errors)
[2025-06-04 01:38:49] 2025-06-04 05:38:30,503 | INFO     | overall cleanup function is called
[2025-06-04 01:38:49] 2025-06-04 05:38:31,509 | INFO     | PID=2763418 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 01:38:49] 2025-06-04 05:38:31,509 | INFO     | .. there are 8 such processes running
[2025-06-04 01:38:49] 2025-06-04 05:38:31,510 | INFO     | --- collectZombieJob: --- 10, [2770390]
[2025-06-04 01:38:49] 2025-06-04 05:38:31,511 | INFO     | zombie collector waiting for pid 2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:31,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:38:49] 2025-06-04 05:38:31,511 | INFO     | collected zombie processes
[2025-06-04 01:38:49] 2025-06-04 05:38:31,511 | INFO     | will attempt to kill all subprocesses of pid=2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:31,534 | WARNING  | process 2770390 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:38:49] 2025-06-04 05:38:31,856 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:38:49] 2025-06-04 05:38:31,858 | INFO     | process IDs to be killed: [2770390] (in reverse order)
[2025-06-04 01:38:49] 2025-06-04 05:38:31,907 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:38:49] 2025-06-04 05:38:31,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:38:49] 2025-06-04 05:38:31,928 | INFO     | did not find any defunct processes belonging to 2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:31,947 | INFO     | did not find any defunct processes belonging to 2770390
[2025-06-04 01:38:49] 2025-06-04 05:38:31,947 | INFO     | ready for new job
[2025-06-04 01:38:49] 2025-06-04 05:38:31,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:38:49] 2025-06-04 05:38:31,949 | INFO     | **************************************
[2025-06-04 01:38:49] 2025-06-04 05:38:31,949 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:38:49] 2025-06-04 05:38:31,949 | INFO     | **************************************
[2025-06-04 01:38:49] 2025-06-04 05:38:31,949 | INFO     | 
[2025-06-04 01:38:49] 2025-06-04 05:38:31,964 | INFO     | architecture information:
[2025-06-04 01:38:49] 2025-06-04 05:38:31,964 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:38:49] 2025-06-04 05:38:31,972 | INFO     | cat /etc/os-release:
[2025-06-04 01:38:49] NAME="CentOS Linux"
[2025-06-04 01:38:49] VERSION="7 (Core)"
[2025-06-04 01:38:49] ID="centos"
[2025-06-04 01:38:49] ID_LIKE="rhel fedora"
[2025-06-04 01:38:49] VERSION_ID="7"
[2025-06-04 01:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:38:49] ANSI_COLOR="0;31"
[2025-06-04 01:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:38:49] HOME_URL="https://www.centos.org/"
[2025-06-04 01:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:38:49] 
[2025-06-04 01:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:38:49] 
[2025-06-04 01:38:49] 2025-06-04 05:38:31,973 | INFO     | **************************************
[2025-06-04 01:38:49] 2025-06-04 05:38:32,022 | INFO     | number of running child processes to parent process 2770390: 1
[2025-06-04 01:38:49] 2025-06-04 05:38:32,022 | INFO     | maximum number of monitored processes: 6
[2025-06-04 01:38:49] 2025-06-04 05:38:32,023 | INFO     | aborting job monitoring since job object (job id=6667201838) has expired
[2025-06-04 01:38:49] 2025-06-04 05:38:32,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:38:49] 2025-06-04 05:38:32,485 | INFO     | sufficient remaining disk space (76332138496 B)
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | INFO     | update_server=False
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:38:49] 2025-06-04 05:38:32,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:38:49] 2025-06-04 05:38:32,487 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:38:49] 2025-06-04 05:38:32,487 | INFO     | will abort loop
[2025-06-04 01:38:49] 2025-06-04 05:38:32,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:38:49] 2025-06-04 05:38:32,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:38:49] 2025-06-04 05:38:32,838 | INFO     | all job control threads have been joined
[2025-06-04 01:38:49] 2025-06-04 05:38:33,122 | INFO     | all data control threads have been joined
[2025-06-04 01:38:49] 2025-06-04 05:38:33,335 | INFO     | all payload control threads have been joined
[2025-06-04 01:38:49] 2025-06-04 05:38:33,491 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:33,492 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:33,808 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:33,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:38:49] 2025-06-04 05:38:33,840 | INFO     | [job] control thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,128 | INFO     | [data] control thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,340 | INFO     | [payload] control thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,348 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,493 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,677 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,790 | INFO     | [job] validate thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,869 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:34,881 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:35,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:38:49] 2025-06-04 05:38:35,821 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:36,493 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:36,493 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:42,775 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:38:49] 2025-06-04 05:38:43,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:38:49] 2025-06-04 05:38:44,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860984661824)>', '<ExcThread(monitor, started 139860492932864)>']
[2025-06-04 01:38:49] 2025-06-04 05:38:44,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:38:49] 2025-06-04 05:38:44,548 | INFO     | [monitor] control thread has ended
[2025-06-04 01:38:49] 2025-06-04 05:38:49,250 | INFO     | all workflow threads have been joined
[2025-06-04 01:38:49] 2025-06-04 05:38:49,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:38:49] 2025-06-04 05:38:49,251 | INFO     | traces error code: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:49,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:38:49] 2025-06-04 05:38:49,381 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:38:49] 2025-06-04 05:38:49,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:38:49] 2025-06-04 05:38:49,385 [wrapper] pilotpid: 2763418
[2025-06-04 01:38:49] 2025-06-04 05:38:49,386 [wrapper] Pilot exit status: 0
[2025-06-04 01:38:49] 2025-06-04 05:38:49,392 [wrapper] pandaids: 6667201838
[2025-06-04 01:38:49] 2025-06-04 05:38:49,424 [wrapper] cleanup supervisor_pilot 2857064 2763419
[2025-06-04 01:38:49] 2025-06-04 05:38:49,426 [wrapper] Test setup, not cleaning
[2025-06-04 01:38:49] 2025-06-04 05:38:49,427 [wrapper] apfmon messages muted
[2025-06-04 01:38:49] 2025-06-04 05:38:49,429 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:38:49] 2025-06-04 05:38:49,430 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:38:49]  *** Error codes and diagnostics ***
[2025-06-04 01:38:49]     "exeErrorCode": 0,
[2025-06-04 01:38:49]     "exeErrorDiag": "",
[2025-06-04 01:38:49]     "pilotErrorCode": 0,
[2025-06-04 01:38:49]     "pilotErrorDiag": "",
[2025-06-04 01:38:49]  *** Listing of results directory ***
[2025-06-04 01:38:49] total 417720
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas    495897 May 27 11:39 pilot3.tar.gz
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas      5111 May 27 11:40 queuedata.json
[2025-06-04 01:38:49] -rwx------. 1 boincer umatlas     37140 May 27 11:43 runpilot2-wrapper.sh
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:38:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:47 run_atlas
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:47 job.xml
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas 224172813 Jun  4 00:47 EVNT.44871834._002738.pool.root.1
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:47 start_atlas.sh
[2025-06-04 01:38:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:47 shared
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 00:47 input.tar.gz
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:47 boinc_lockfile
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 00:47 pandaJob.out
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas    986745 Jun  4 00:47 agis_schedconf.cvmfs.json
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:38:49] drwx------. 4 boincer umatlas      4096 Jun  4 00:47 pilot3
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 01:30 init_data.xml
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas        95 Jun  4 01:37 pilot_heartbeat.json
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas 198368873 Jun  4 01:37 HITS.44871837._069645.pool.root.1
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas       529 Jun  4 01:38 boinc_task_state.xml
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas      1040 Jun  4 01:38 memory_monitor_summary.json
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas    357672 Jun  4 01:38 log.44871837._069645.job.log.tgz.1
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas      7707 Jun  4 01:38 heartbeat.json
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:38 boinc_mmap_file
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:38 wrapper_checkpoint.txt
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas      4838 Jun  4 01:38 pilotlog.txt
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas    325071 Jun  4 01:38 log.44871837._069645.job.log.1
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas       357 Jun  4 01:38 output.list
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:38 runtime_log
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas    706560 Jun  4 01:38 result.tar.gz
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 01:38 runtime_log.err
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas       648 Jun  4 01:38 E68KDmRdBe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtmZKDmr6P4xn.diag
[2025-06-04 01:38:49] -rw-r--r--. 1 boincer umatlas     21537 Jun  4 01:38 stderr.txt
[2025-06-04 01:38:49] HITS file was successfully produced:
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas 198368873 Jun  4 01:37 shared/HITS.pool.root.1
[2025-06-04 01:38:49]  *** Contents of shared directory: ***
[2025-06-04 01:38:49] total 413852
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas 224172813 Jun  4 00:47 ATLAS.root_0
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:47 start_atlas.sh
[2025-06-04 01:38:49] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 00:47 input.tar.gz
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas 198368873 Jun  4 01:37 HITS.pool.root.1
[2025-06-04 01:38:49] -rw-------. 1 boincer umatlas    706560 Jun  4 01:38 result.tar.gz
01:38:51 (2759784): run_atlas exited; CPU time 28247.872777
01:38:51 (2759784): called boinc_finish(0)

</stderr_txt>
]]>

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