Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:45 (2899561): wrapper (7.7.26015): starting
00:09:45 (2899561): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 00:09:45] Arguments: --nthreads 10
[2025-06-04 00:09:45] Threads: 10
[2025-06-04 00:09:45] Checking for CVMFS
[2025-06-04 00:09:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:09:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:09:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:09:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:09:46] 2.12.6.0 551375 178504 313012 146767 1 503 20014030 32935937 12777 130560 1 375187402 99.659 342533925 26795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:09:46] CVMFS is ok
[2025-06-04 00:09:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:09:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:09:46] Further information can be found at the LHC@home message board.
[2025-06-04 00:09:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:09:46] Checking for apptainer binary...
[2025-06-04 00:09:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:09:46] Running /usr/bin/apptainer --version
[2025-06-04 00:09:46] apptainer version 1.4.1-1.el9
[2025-06-04 00:09:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:09:46] c-4-40.aglt2.org
[2025-06-04 00:09:46] apptainer works
[2025-06-04 00:09:46] Set ATHENA_PROC_NUMBER=10
[2025-06-04 00:09:46] Set ATHENA_CORE_NUMBER=10
[2025-06-04 00:09:46] Starting ATLAS job with PandaID=6677441739
[2025-06-04 00:09:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:36:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:36:06]  filetype=log
[2025-06-04 01:36:06]  guid=032003cd-efcc-484b-86b9-f788395af617
[2025-06-04 01:36:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 01:36:06]  is_altstaged=None
[2025-06-04 01:36:06]  is_tar=False
[2025-06-04 01:36:06]  lfn=log.45006595._015979.job.log.tgz.1
[2025-06-04 01:36:06]  mtime=0
[2025-06-04 01:36:06]  protocol_id=None
[2025-06-04 01:36:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:36:06]  replicas=None
[2025-06-04 01:36:06]  scope=mc23_13p6TeV
[2025-06-04 01:36:06]  status=None
[2025-06-04 01:36:06]  status_code=0
[2025-06-04 01:36:06]  storage_token=
[2025-06-04 01:36:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677441739/log.45006595._015979.job.log.tgz.1
[2025-06-04 01:36:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/a7/log.45006595._015979.job.log.tgz.1
[2025-06-04 01:36:06]  workdir=None
[2025-06-04 01:36:06] ]
[2025-06-04 01:36:06] 2025-06-04 05:35:48,886 | INFO     | transferring file log.45006595._015979.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677441739/log.45006595._015979.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:36:06] 2025-06-04 05:35:48,886 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677441739/log.45006595._015979.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._015979.job
[2025-06-04 01:36:06] 2025-06-04 05:35:48,905 | INFO     | adding to output.list: log.45006595._015979.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/a7/log.45006595._015979.job.log.tg
[2025-06-04 01:36:06] 2025-06-04 05:35:48,906 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:36:06] 2025-06-04 05:35:48,906 | INFO     | summary of transferred files:
[2025-06-04 01:36:06] 2025-06-04 05:35:48,906 | INFO     |  -- lfn=log.45006595._015979.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:36:06] 2025-06-04 05:35:48,906 | INFO     | stage-out finished correctly
[2025-06-04 01:36:06] 2025-06-04 05:35:49,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:36:06] 2025-06-04 05:35:49,127 | INFO     | job 6677441739 has state=finished
[2025-06-04 01:36:06] 2025-06-04 05:35:49,128 | INFO     | preparing for final server update for job 6677441739 in state='finished'
[2025-06-04 01:36:06] 2025-06-04 05:35:49,128 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:36:06] 2025-06-04 05:35:49,128 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:36:06] 2025-06-04 05:35:49,128 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:36:06] 2025-06-04 05:35:49,128 | INFO     | job 6677441739 has finished - writing final server update
[2025-06-04 01:36:06] 2025-06-04 05:35:49,129 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:36:06] 2025-06-04 05:35:49,144 | INFO     | executing command: lscpu
[2025-06-04 01:36:06] 2025-06-04 05:35:49,212 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:36:06] 2025-06-04 05:35:49,931 | INFO     | PID=2903176 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 01:36:06] 2025-06-04 05:35:49,931 | INFO     | .. there are 27 such processes running
[2025-06-04 01:36:06] 2025-06-04 05:35:50,846 | WARNING  | process 2910693 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:36:06] 2025-06-04 05:35:50,847 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677441739/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:36:06] 2025-06-04 05:35:51,075 | INFO     | number of running child processes to parent process 2910693: 1
[2025-06-04 01:36:06] 2025-06-04 05:35:51,075 | INFO     | maximum number of monitored processes: 6
[2025-06-04 01:36:06] 2025-06-04 05:35:53,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 01:36:06] 2025-06-04 05:35:53,217 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677441739/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:36:06] 2025-06-04 05:35:53,218 | INFO     | extracted standard info from prmon json
[2025-06-04 01:36:06] 2025-06-04 05:35:53,218 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:36:06] 2025-06-04 05:35:53,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:36:06] 2025-06-04 05:35:53,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:36:06] 2025-06-04 05:35:53,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:36:06] 2025-06-04 05:35:53,221 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:36:06] 2025-06-04 05:35:53,221 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | sum of deviations: 13209742088.999998
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | mean x: 1749012847.0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | mean y: 2279090.1818181816
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | -- intersect: -163231484410.90085
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | intersect: -163231484410.90085
[2025-06-04 01:36:06] 2025-06-04 05:35:53,222 | INFO     | chi2: 1.670894183477081
[2025-06-04 01:36:06] 2025-06-04 05:35:53,223 | INFO     | -- intersect: -163231484410.90085
[2025-06-04 01:36:06] 2025-06-04 05:35:53,223 | INFO     | current memory leak: 93.33 B/s (using 77 data points, chi2=1.67)
[2025-06-04 01:36:06] 2025-06-04 05:35:53,223 | INFO     | ..............................
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . Timing measurements:
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . get job = 0 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . initial setup = 3 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . payload setup = 6 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . stage-in = 0 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . payload execution = 5123 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . stage-out = 0 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | . log creation = 0 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,224 | INFO     | ..............................
[2025-06-04 01:36:06] 2025-06-04 05:35:53,547 | INFO     | 
[2025-06-04 01:36:06] 2025-06-04 05:35:53,547 | INFO     | job summary report
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | --------------------------------------------------
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | PanDA job id: 6677441739
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | task id: 45006595
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | errors: (none)
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | pilot state: finished 
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | transexitcode: 0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | exeerrorcode: 0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | exeerrordiag: 
[2025-06-04 01:36:06] 2025-06-04 05:35:53,548 | INFO     | exitcode: 0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | exitmsg: OK
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | cpuconsumptiontime: 42612 s
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | nevents: 400
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | neventsw: 0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | pid: 2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | pgrp: 2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | corecount: 10
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | event service: False
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | sizes: {0: 2405176, 4: 2405382, 11: 2405410, 5134: 2431661, 5136: 2440658, 5140: 2440772}
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | --------------------------------------------------
[2025-06-04 01:36:06] 2025-06-04 05:35:53,549 | INFO     | 
[2025-06-04 01:36:06] 2025-06-04 05:35:53,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:36:06] 2025-06-04 05:35:53,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | job 6677441739 has completed (purged errors)
[2025-06-04 01:36:06] 2025-06-04 05:35:53,572 | INFO     | overall cleanup function is called
[2025-06-04 01:36:06] 2025-06-04 05:35:54,580 | INFO     | --- collectZombieJob: --- 10, [2910693]
[2025-06-04 01:36:06] 2025-06-04 05:35:54,580 | INFO     | zombie collector waiting for pid 2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:54,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:36:06] 2025-06-04 05:35:54,581 | INFO     | collected zombie processes
[2025-06-04 01:36:06] 2025-06-04 05:35:54,581 | INFO     | will attempt to kill all subprocesses of pid=2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:54,809 | INFO     | process IDs to be killed: [2910693] (in reverse order)
[2025-06-04 01:36:06] 2025-06-04 05:35:54,903 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:36:06] 2025-06-04 05:35:54,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:36:06] 2025-06-04 05:35:54,916 | INFO     | did not find any defunct processes belonging to 2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:54,929 | INFO     | did not find any defunct processes belonging to 2910693
[2025-06-04 01:36:06] 2025-06-04 05:35:54,929 | INFO     | ready for new job
[2025-06-04 01:36:06] 2025-06-04 05:35:54,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:36:06] 2025-06-04 05:35:54,931 | INFO     | **************************************
[2025-06-04 01:36:06] 2025-06-04 05:35:54,931 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:36:06] 2025-06-04 05:35:54,931 | INFO     | **************************************
[2025-06-04 01:36:06] 2025-06-04 05:35:54,931 | INFO     | 
[2025-06-04 01:36:06] 2025-06-04 05:35:54,945 | INFO     | architecture information:
[2025-06-04 01:36:06] 2025-06-04 05:35:54,945 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:36:06] 2025-06-04 05:35:54,960 | INFO     | cat /etc/os-release:
[2025-06-04 01:36:06] NAME="CentOS Linux"
[2025-06-04 01:36:06] VERSION="7 (Core)"
[2025-06-04 01:36:06] ID="centos"
[2025-06-04 01:36:06] ID_LIKE="rhel fedora"
[2025-06-04 01:36:06] VERSION_ID="7"
[2025-06-04 01:36:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:36:06] ANSI_COLOR="0;31"
[2025-06-04 01:36:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:36:06] HOME_URL="https://www.centos.org/"
[2025-06-04 01:36:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:36:06] 
[2025-06-04 01:36:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:36:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:36:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:36:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:36:06] 
[2025-06-04 01:36:06] 2025-06-04 05:35:54,960 | INFO     | **************************************
[2025-06-04 01:36:06] 2025-06-04 05:35:55,462 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:36:06] 2025-06-04 05:35:55,478 | INFO     | sufficient remaining disk space (76509347840 B)
[2025-06-04 01:36:06] 2025-06-04 05:35:55,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | INFO     | update_server=False
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:36:06] 2025-06-04 05:35:55,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:36:06] 2025-06-04 05:35:55,480 | INFO     | aborting loop
[2025-06-04 01:36:06] 2025-06-04 05:35:55,845 | INFO     | all data control threads have been joined
[2025-06-04 01:36:06] 2025-06-04 05:35:55,947 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:36:06] 2025-06-04 05:35:55,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:36:06] 2025-06-04 05:35:55,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:36:06] 2025-06-04 05:35:56,484 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,485 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,507 | INFO     | [job] validate thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,737 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,744 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,756 | INFO     | all job control threads have been joined
[2025-06-04 01:36:06] 2025-06-04 05:35:56,849 | INFO     | [data] control thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:56,850 | INFO     | all payload control threads have been joined
[2025-06-04 01:36:06] 2025-06-04 05:35:56,969 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,008 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,235 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,480 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,542 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,739 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,760 | INFO     | [job] control thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:57,854 | INFO     | [payload] control thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:58,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:36:06] 2025-06-04 05:35:59,352 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:35:59,483 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:36:06] 2025-06-04 05:36:01,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416688904000)>', '<ExcThread(monitor, started 140415902676736)>']
[2025-06-04 01:36:06] 2025-06-04 05:36:01,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:36:06] 2025-06-04 05:36:01,974 | INFO     | [monitor] control thread has ended
[2025-06-04 01:36:06] 2025-06-04 05:36:06,511 | INFO     | all workflow threads have been joined
[2025-06-04 01:36:06] 2025-06-04 05:36:06,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:36:06] 2025-06-04 05:36:06,512 | INFO     | traces error code: 0
[2025-06-04 01:36:06] 2025-06-04 05:36:06,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:36:06] 2025-06-04 05:36:06,667 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:36:06] 2025-06-04 05:36:06,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:36:06] 2025-06-04 05:36:06,673 [wrapper] pilotpid: 2903176
[2025-06-04 01:36:06] 2025-06-04 05:36:06,675 [wrapper] Pilot exit status: 0
[2025-06-04 01:36:06] 2025-06-04 05:36:06,686 [wrapper] pandaids: 6677441739
[2025-06-04 01:36:06] 2025-06-04 05:36:06,754 [wrapper] cleanup supervisor_pilot 3157249 2903177
[2025-06-04 01:36:06] 2025-06-04 05:36:06,757 [wrapper] Test setup, not cleaning
[2025-06-04 01:36:06] 2025-06-04 05:36:06,760 [wrapper] apfmon messages muted
[2025-06-04 01:36:06] 2025-06-04 05:36:06,763 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:36:06] 2025-06-04 05:36:06,766 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:36:06]  *** Error codes and diagnostics ***
[2025-06-04 01:36:06]     "exeErrorCode": 0,
[2025-06-04 01:36:06]     "exeErrorDiag": "",
[2025-06-04 01:36:06]     "pilotErrorCode": 0,
[2025-06-04 01:36:06]     "pilotErrorDiag": "",
[2025-06-04 01:36:06]  *** Listing of results directory ***
[2025-06-04 01:36:06] total 395204
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 20:46 pilot3.tar.gz
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 21:07 queuedata.json
[2025-06-04 01:36:06] -rwx------. 1 boincer umatlas     37140 Jun  2 21:09 runpilot2-wrapper.sh
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:36:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:09 run_atlas
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:09 job.xml
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas 215005905 Jun  4 00:09 EVNT.45006593._000640.pool.root.1
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:09 start_atlas.sh
[2025-06-04 01:36:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:09 shared
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 00:09 input.tar.gz
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:09 boinc_lockfile
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas      2521 Jun  4 00:09 pandaJob.out
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas    986077 Jun  4 00:09 agis_schedconf.cvmfs.json
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:36:06] drwx------. 4 boincer umatlas      4096 Jun  4 00:09 pilot3
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas      6673 Jun  4 01:27 init_data.xml
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas 184208660 Jun  4 01:35 HITS.45006595._015979.pool.root.1
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas       529 Jun  4 01:35 boinc_task_state.xml
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas      1042 Jun  4 01:35 memory_monitor_summary.json
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:35 boinc_mmap_file
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:35 wrapper_checkpoint.txt
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas    325915 Jun  4 01:35 log.45006595._015979.job.log.tgz.1
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas      7712 Jun  4 01:35 heartbeat.json
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas        95 Jun  4 01:35 pilot_heartbeat.json
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas      4353 Jun  4 01:36 pilotlog.txt
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas    497772 Jun  4 01:36 log.45006595._015979.job.log.1
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas       357 Jun  4 01:36 output.list
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:36 runtime_log
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas    839680 Jun  4 01:36 result.tar.gz
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 01:36 runtime_log.err
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas       651 Jun  4 01:36 4cyMDmVKVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdMhKDmfVIFkm.diag
[2025-06-04 01:36:06] -rw-r--r--. 1 boincer umatlas     21290 Jun  4 01:36 stderr.txt
[2025-06-04 01:36:06] HITS file was successfully produced:
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas 184208660 Jun  4 01:35 shared/HITS.pool.root.1
[2025-06-04 01:36:06]  *** Contents of shared directory: ***
[2025-06-04 01:36:06] total 391200
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas 215005905 Jun  4 00:09 ATLAS.root_0
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:09 start_atlas.sh
[2025-06-04 01:36:06] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 00:09 input.tar.gz
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas 184208660 Jun  4 01:35 HITS.pool.root.1
[2025-06-04 01:36:06] -rw-------. 1 boincer umatlas    839680 Jun  4 01:36 result.tar.gz
01:36:08 (2899561): run_atlas exited; CPU time 42720.924851
01:36:08 (2899561): called boinc_finish(0)

</stderr_txt>
]]>

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