Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:49 (667893): wrapper (7.7.26015): starting
16:14:49 (667893): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:14:49] Arguments: --nthreads 4
[2025-06-05 16:14:49] Threads: 4
[2025-06-05 16:14:49] Checking for CVMFS
[2025-06-05 16:14:49] No cvmfs_config command found, will try listing directly
[2025-06-05 16:14:49] CVMFS is ok
[2025-06-05 16:14:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:14:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:14:49] Further information can be found at the LHC@home message board.
[2025-06-05 16:14:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:14:49] Checking for apptainer binary...
[2025-06-05 16:14:49] which: no apptainer in ((null))
[2025-06-05 16:14:49] apptainer is not installed, using version from CVMFS
[2025-06-05 16:14:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:14:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 16:14:50] apptainer works
[2025-06-05 16:14:50] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:14:50] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:14:50] Starting ATLAS job with PandaID=6678155225
[2025-06-05 16:14:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:31:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:31:35] 2025-06-05 16:30:42,961 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:31:35] 2025-06-05 16:30:45,051 | INFO     | monitor loop #566: job 0:6678155225 is in state 'finished'
[2025-06-05 18:31:35] 2025-06-05 16:30:45,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:31:35] 2025-06-05 16:30:47,556 | INFO     | monitor loop #567: job 0:6678155225 is in state 'finished'
[2025-06-05 18:31:35] 2025-06-05 16:30:47,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,232 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:31:35] 2025-06-05 16:30:49,232 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6678155225/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,233 | INFO     | extracted standard info from prmon json
[2025-06-05 18:31:35] 2025-06-05 16:30:49,233 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:31:35] 2025-06-05 16:30:49,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:31:35] 2025-06-05 16:30:49,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:31:35] 2025-06-05 16:30:49,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:31:35] 2025-06-05 16:30:49,236 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:31:35] 2025-06-05 16:30:49,236 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,237 | INFO     | sum of deviations: 7523871698.999999
[2025-06-05 18:31:35] 2025-06-05 16:30:49,237 | INFO     | mean x: 1749136962.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,237 | INFO     | mean y: 2324719.1428571427
[2025-06-05 18:31:35] 2025-06-05 16:30:49,237 | INFO     | -- intersect: -18038500697.807858
[2025-06-05 18:31:35] 2025-06-05 16:30:49,237 | INFO     | intersect: -18038500697.807858
[2025-06-05 18:31:35] 2025-06-05 16:30:49,238 | INFO     | chi2: 1.669311719140692
[2025-06-05 18:31:35] 2025-06-05 16:30:49,238 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | sum of deviations: 7393747444.5
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | mean x: 1749136809.5
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | mean y: 2324468.5546875
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | -- intersect: -19886383288.88338
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | intersect: -19886383288.88338
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | chi2: 1.671783900564952
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | current chi2=1.671783900564952 (change=-0.14809585267468597 %)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,239 | INFO     | right removable region: 127
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | sum of deviations: -12660149565.5
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | mean x: 1749137114.5
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | mean y: 2362922.3828125
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | -- intersect: 34057361509.9725
[2025-06-05 18:31:35] 2025-06-05 16:30:49,240 | INFO     | intersect: 34057361509.9725
[2025-06-05 18:31:35] 2025-06-05 16:30:49,241 | INFO     | chi2: 0.03559659803112572
[2025-06-05 18:31:35] 2025-06-05 16:30:49,241 | INFO     | current chi2=0.03559659803112572 (change=97.86758832260223 %)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,241 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | sum of deviations: -10748035483.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | mean x: 1749137267.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | mean y: 2358896.3577235774
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | -- intersect: 32585123677.509342
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | intersect: 32585123677.509342
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | chi2: 0.031856626983589695
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | current chi2=0.031856626983589695 (change=10.506540665110158 %)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | left removable region: 20
[2025-06-05 18:31:35] 2025-06-05 16:30:49,242 | INFO     | sum of square deviations: 379832238.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,243 | INFO     | sum of deviations: -4434978465.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,243 | INFO     | mean x: 1749137389.0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,243 | INFO     | mean y: 2345392.1308411215
[2025-06-05 18:31:35] 2025-06-05 16:30:49,243 | INFO     | -- intersect: 20425537202.777855
[2025-06-05 18:31:35] 2025-06-05 16:30:49,243 | INFO     | intersect: 20425537202.777855
[2025-06-05 18:31:35] 2025-06-05 16:30:49,244 | INFO     | chi2: 0.008261483839223592
[2025-06-05 18:31:35] 2025-06-05 16:30:49,244 | INFO     | -- intersect: 20425537202.777855
[2025-06-05 18:31:35] 2025-06-05 16:30:49,244 | INFO     | current memory leak: -11.68 B/s (using 107 data points, chi2=0.01)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | ..............................
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . Timing measurements:
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . get job = 0 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . initial setup = 1 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . payload setup = 9 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . stage-in = 0 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . payload execution = 8104 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . stage-out = 0 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | . log creation = 0 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,245 | INFO     | ..............................
[2025-06-05 18:31:35] 2025-06-05 16:30:49,340 | INFO     | 
[2025-06-05 18:31:35] 2025-06-05 16:30:49,340 | INFO     | job summary report
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | --------------------------------------------------
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | PanDA job id: 6678155225
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | task id: 45006595
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | errors: (none)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | pilot state: finished 
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | transexitcode: 0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | exeerrorcode: 0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | exeerrordiag: 
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | exitcode: 0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | exitmsg: OK
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | cpuconsumptiontime: 30644 s
[2025-06-05 18:31:35] 2025-06-05 16:30:49,341 | INFO     | nevents: 400
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | neventsw: 0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | pid: 680354
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | pgrp: 680354
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | corecount: 4
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | event service: False
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | sizes: {0: 2397183, 1: 2397382, 7: 2397588, 12: 2397616, 8118: 2425414, 8119: 2434379, 8120: 2434563, 8130: 2434733}
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | --------------------------------------------------
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | 
[2025-06-05 18:31:35] 2025-06-05 16:30:49,342 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:31:35] 2025-06-05 16:30:49,370 | INFO     | job 6678155225 has completed (purged errors)
[2025-06-05 18:31:35] 2025-06-05 16:30:49,370 | INFO     | overall cleanup function is called
[2025-06-05 18:31:35] 2025-06-05 16:30:50,379 | INFO     | --- collectZombieJob: --- 10, [680354]
[2025-06-05 18:31:35] 2025-06-05 16:30:50,381 | INFO     | zombie collector waiting for pid 680354
[2025-06-05 18:31:35] 2025-06-05 16:30:50,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:31:35] 2025-06-05 16:30:50,381 | INFO     | collected zombie processes
[2025-06-05 18:31:35] 2025-06-05 16:30:50,381 | INFO     | will attempt to kill all subprocesses of pid=680354
[2025-06-05 18:31:35] 2025-06-05 16:30:51,994 | INFO     | process IDs to be killed: [680354] (in reverse order)
[2025-06-05 18:31:35] 2025-06-05 16:30:52,220 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:31:35] 2025-06-05 16:30:52,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:31:35] 2025-06-05 16:30:52,278 | INFO     | did not find any defunct processes belonging to 680354
[2025-06-05 18:31:35] 2025-06-05 16:30:52,332 | INFO     | did not find any defunct processes belonging to 680354
[2025-06-05 18:31:35] 2025-06-05 16:30:52,332 | INFO     | ready for new job
[2025-06-05 18:31:35] 2025-06-05 16:30:52,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:31:35] 2025-06-05 16:30:52,334 | INFO     | **************************************
[2025-06-05 18:31:35] 2025-06-05 16:30:52,334 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:31:35] 2025-06-05 16:30:52,334 | INFO     | **************************************
[2025-06-05 18:31:35] 2025-06-05 16:30:52,335 | INFO     | 
[2025-06-05 18:31:35] 2025-06-05 16:30:52,345 | INFO     | architecture information:
[2025-06-05 18:31:35] 2025-06-05 16:30:52,346 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:31:35] 2025-06-05 16:30:52,362 | INFO     | PID=671917 has CPU usage=24.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 18:31:35] 2025-06-05 16:30:52,363 | INFO     | .. there are 12 such processes running
[2025-06-05 18:31:35] 2025-06-05 16:30:52,372 | INFO     | cat /etc/os-release:
[2025-06-05 18:31:35] NAME="CentOS Linux"
[2025-06-05 18:31:35] VERSION="7 (Core)"
[2025-06-05 18:31:35] ID="centos"
[2025-06-05 18:31:35] ID_LIKE="rhel fedora"
[2025-06-05 18:31:35] VERSION_ID="7"
[2025-06-05 18:31:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:31:35] ANSI_COLOR="0;31"
[2025-06-05 18:31:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:31:35] HOME_URL="https://www.centos.org/"
[2025-06-05 18:31:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:31:35] 
[2025-06-05 18:31:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:31:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:31:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:31:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:31:35] 
[2025-06-05 18:31:35] 2025-06-05 16:30:52,372 | INFO     | **************************************
[2025-06-05 18:31:35] 2025-06-05 16:30:52,875 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-05 18:31:35] 2025-06-05 16:30:52,897 | INFO     | sufficient remaining disk space (3259256274944 B)
[2025-06-05 18:31:35] 2025-06-05 16:30:52,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:31:35] 2025-06-05 16:30:52,897 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:31:35] 2025-06-05 16:30:52,897 | INFO     | update_server=False
[2025-06-05 18:31:35] 2025-06-05 16:30:52,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:31:35] 2025-06-05 16:30:52,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:31:35] 2025-06-05 16:30:52,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:31:35] 2025-06-05 16:30:52,898 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:31:35] 2025-06-05 16:30:52,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:31:35] 2025-06-05 16:30:52,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:31:35] 2025-06-05 16:30:53,417 | INFO     | all payload control threads have been joined
[2025-06-05 18:31:35] 2025-06-05 16:30:53,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:31:35] 2025-06-05 16:30:53,571 | INFO     | aborting loop
[2025-06-05 18:31:35] 2025-06-05 16:30:53,611 | INFO     | all data control threads have been joined
[2025-06-05 18:31:35] 2025-06-05 16:30:53,904 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:53,910 | INFO     | all job control threads have been joined
[2025-06-05 18:31:35] 2025-06-05 16:30:53,987 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:31:35] 2025-06-05 16:30:54,422 | INFO     | [payload] control thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,558 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,576 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,614 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,617 | INFO     | [data] control thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,838 | INFO     | [job] validate thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,903 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,915 | INFO     | [job] control thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:54,968 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:55,062 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:55,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:55,131 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:55,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:31:35] 2025-06-05 16:30:55,356 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:30:59,274 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:31:35] 2025-06-05 16:31:00,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22959421015872)>', '<ExcThread(monitor, started 22959175452416)>']
[2025-06-05 18:31:35] 2025-06-05 16:31:00,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:31:35] 2025-06-05 16:31:00,939 | INFO     | [monitor] control thread has ended
[2025-06-05 18:31:35] 2025-06-05 16:31:05,351 | INFO     | all workflow threads have been joined
[2025-06-05 18:31:35] 2025-06-05 16:31:05,351 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:31:35] 2025-06-05 16:31:05,351 | INFO     | traces error code: 0
[2025-06-05 18:31:35] 2025-06-05 16:31:05,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:31:35] 2025-06-05 16:31:05,494 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:31:35] 2025-06-05 16:31:05,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:31:35] 2025-06-05 16:31:05,502 [wrapper] pilotpid: 671917
[2025-06-05 18:31:35] 2025-06-05 16:31:05,506 [wrapper] Pilot exit status: 0
[2025-06-05 18:31:35] 2025-06-05 16:31:05,521 [wrapper] pandaids: 6678155225
[2025-06-05 18:31:35] 2025-06-05 16:31:05,668 [wrapper] cleanup supervisor_pilot 1184080 671918
[2025-06-05 18:31:35] 2025-06-05 16:31:05,673 [wrapper] Test setup, not cleaning
[2025-06-05 18:31:35] 2025-06-05 16:31:05,677 [wrapper] apfmon messages muted
[2025-06-05 18:31:35] 2025-06-05 16:31:05,680 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:31:35] 2025-06-05 16:31:05,683 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:31:35]  *** Error codes and diagnostics ***
[2025-06-05 18:31:35]     "exeErrorCode": 0,
[2025-06-05 18:31:35]     "exeErrorDiag": "",
[2025-06-05 18:31:35]     "pilotErrorCode": 0,
[2025-06-05 18:31:35]     "pilotErrorDiag": "",
[2025-06-05 18:31:35]  *** Listing of results directory ***
[2025-06-05 18:31:35] total 395348
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:22 queuedata.json
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:22 pilot3.tar.gz
[2025-06-05 18:31:35] -rwx------ 1 boinc boinc     37140 Jun  4 01:23 runpilot2-wrapper.sh
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:31:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:14 run_atlas
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:14 job.xml
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc      6687 Jun  5 16:14 init_data.xml
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc 215513305 Jun  5 16:14 EVNT.45006593._001923.pool.root.1
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 18:31:35] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:14 shared
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc    508884 Jun  5 16:14 input.tar.gz
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:14 boinc_lockfile
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc      2525 Jun  5 16:14 pandaJob.out
[2025-06-05 18:31:35] -rw------- 1 boinc boinc    983210 Jun  5 16:15 agis_schedconf.cvmfs.json
[2025-06-05 18:31:35] -rw------- 1 boinc boinc   1598969 Jun  5 16:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:31:35] drwx------ 4 boinc boinc      4096 Jun  5 16:15 pilot3
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc       529 Jun  5 18:30 boinc_task_state.xml
[2025-06-05 18:31:35] -rw------- 1 boinc boinc 183411035 Jun  5 18:30 HITS.45006595._047893.pool.root.1
[2025-06-05 18:31:35] -rw------- 1 boinc boinc      1032 Jun  5 18:30 memory_monitor_summary.json
[2025-06-05 18:31:35] -rw------- 1 boinc boinc    272663 Jun  5 18:30 log.45006595._047893.job.log.tgz.1
[2025-06-05 18:31:35] -rw------- 1 boinc boinc      7702 Jun  5 18:30 heartbeat.json
[2025-06-05 18:31:35] -rw------- 1 boinc boinc        95 Jun  5 18:30 pilot_heartbeat.json
[2025-06-05 18:31:35] -rw------- 1 boinc boinc      4883 Jun  5 18:31 pilotlog.txt
[2025-06-05 18:31:35] -rw------- 1 boinc boinc    766616 Jun  5 18:31 log.45006595._047893.job.log.1
[2025-06-05 18:31:35] -rw------- 1 boinc boinc       357 Jun  5 18:31 output.list
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:31 runtime_log
[2025-06-05 18:31:35] -rw------- 1 boinc boinc   1054720 Jun  5 18:31 result.tar.gz
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc      9040 Jun  5 18:31 runtime_log.err
[2025-06-05 18:31:35] -rw------- 1 boinc boinc       662 Jun  5 18:31 cbqKDmT9pg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgUmKDmzHyAGm.diag
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc        27 Jun  5 18:31 wrapper_checkpoint.txt
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:31 boinc_mmap_file
[2025-06-05 18:31:35] -rw-r--r-- 1 boinc boinc     21043 Jun  5 18:31 stderr.txt
[2025-06-05 18:31:35] HITS file was successfully produced:
[2025-06-05 18:31:35] -rw------- 1 boinc boinc 183411035 Jun  5 18:30 shared/HITS.pool.root.1
[2025-06-05 18:31:35]  *** Contents of shared directory: ***
[2025-06-05 18:31:35] total 391136
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc 215513305 Jun  5 16:14 ATLAS.root_0
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:14 start_atlas.sh
[2025-06-05 18:31:35] -rw-r--r-- 2 boinc boinc    508884 Jun  5 16:14 input.tar.gz
[2025-06-05 18:31:35] -rw------- 1 boinc boinc 183411035 Jun  5 18:30 HITS.pool.root.1
[2025-06-05 18:31:35] -rw------- 1 boinc boinc   1054720 Jun  5 18:31 result.tar.gz
18:31:36 (667893): run_atlas exited; CPU time 31119.246708
18:31:36 (667893): called boinc_finish(0)

</stderr_txt>
]]>

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