Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:03 (1892571): wrapper (7.7.26015): starting
16:21:03 (1892571): wrapper: running run_atlas (--nthreads 6)
[2025-06-04 16:21:03] Arguments: --nthreads 6
[2025-06-04 16:21:03] Threads: 6
[2025-06-04 16:21:03] Checking for CVMFS
[2025-06-04 16:21:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:21:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:21:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:21:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:21:04] 2.11.5.0 4066018 1969 74396 146772 3 55 47586063 52428801 1858 130560 0 5624959 99.997 521654 100 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 16:21:04] CVMFS is ok
[2025-06-04 16:21:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:21:04] Checking for apptainer binary...
[2025-06-04 16:21:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:21:04] Running /usr/bin/apptainer --version
[2025-06-04 16:21:04] apptainer version 1.3.5-1.el9
[2025-06-04 16:21:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:21:04] testio008
[2025-06-04 16:21:04] apptainer works
[2025-06-04 16:21:04] Set ATHENA_PROC_NUMBER=6
[2025-06-04 16:21:04] Set ATHENA_CORE_NUMBER=6
[2025-06-04 16:21:04] Starting ATLAS job with PandaID=6667365018
[2025-06-04 16:21:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:52:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:52:09] 2025-06-04 08:51:04,507 | INFO     | .. there are 3 such processes running
[2025-06-04 17:52:09] 2025-06-04 08:51:06,735 | INFO     | monitor loop #409: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:06,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:08,273 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-06-04 17:52:09] 2025-06-04 08:51:09,238 | INFO     | monitor loop #410: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:09,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:11,741 | INFO     | monitor loop #411: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:11,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:14,244 | INFO     | monitor loop #412: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:14,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:16,747 | INFO     | monitor loop #413: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:16,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:19,250 | INFO     | monitor loop #414: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:19,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:21,753 | INFO     | monitor loop #415: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:21,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:24,256 | INFO     | monitor loop #416: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:24,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:26,607 | INFO     | PID=1896273 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:52:09] 2025-06-04 08:51:26,607 | INFO     | .. there are 3 such processes running
[2025-06-04 17:52:09] 2025-06-04 08:51:26,759 | INFO     | monitor loop #417: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:26,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:29,262 | INFO     | monitor loop #418: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:29,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:31,765 | INFO     | monitor loop #419: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:31,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:34,268 | INFO     | monitor loop #420: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:34,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:36,771 | INFO     | monitor loop #421: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:36,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:39,274 | INFO     | monitor loop #422: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:39,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:41,777 | INFO     | monitor loop #423: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:41,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:44,280 | INFO     | monitor loop #424: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:44,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:46,783 | INFO     | monitor loop #425: job 0:6667365018 is in state 'finished'
[2025-06-04 17:52:09] 2025-06-04 08:51:46,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,305 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:52:09] 2025-06-04 08:51:48,305 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6667365018/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,306 | INFO     | extracted standard info from prmon json
[2025-06-04 17:52:09] 2025-06-04 08:51:48,306 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:52:09] 2025-06-04 08:51:48,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:52:09] 2025-06-04 08:51:48,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:52:09] 2025-06-04 08:51:48,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:52:09] 2025-06-04 08:51:48,308 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:52:09] 2025-06-04 08:51:48,308 | INFO     | sum of square deviations: 164765880.0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | sum of deviations: 13041001144.0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | mean x: 1749024437.0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | mean y: 2440909.3827160494
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | -- intersect: -138430526424.63666
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | intersect: -138430526424.63666
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | chi2: 1.4711508606202948
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | -- intersect: -138430526424.63666
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | current memory leak: 79.15 B/s (using 81 data points, chi2=1.47)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,309 | INFO     | ..............................
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . Timing measurements:
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . get job = 0 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . initial setup = 5 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . payload setup = 2 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . stage-in = 0 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . payload execution = 5337 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . stage-out = 0 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | . log creation = 0 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,310 | INFO     | ..............................
[2025-06-04 17:52:09] 2025-06-04 08:51:48,385 | INFO     | 
[2025-06-04 17:52:09] 2025-06-04 08:51:48,385 | INFO     | job summary report
[2025-06-04 17:52:09] 2025-06-04 08:51:48,385 | INFO     | --------------------------------------------------
[2025-06-04 17:52:09] 2025-06-04 08:51:48,385 | INFO     | PanDA job id: 6667365018
[2025-06-04 17:52:09] 2025-06-04 08:51:48,385 | INFO     | task id: 44871837
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | errors: (none)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | pilot state: finished 
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | transexitcode: 0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | exeerrorcode: 0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | exeerrordiag: 
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | exitcode: 0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | exitmsg: OK
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | cpuconsumptiontime: 27437 s
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | nevents: 400
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | neventsw: 0
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | pid: 1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | pgrp: 1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | corecount: 6
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | event service: False
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | sizes: {0: 2405062, 1: 2405261, 2: 2405467, 11: 2405495, 5344: 2431910, 5346: 2440851, 5347: 2441035, 5421: 2441205}
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | --------------------------------------------------
[2025-06-04 17:52:09] 2025-06-04 08:51:48,386 | INFO     | 
[2025-06-04 17:52:09] 2025-06-04 08:51:48,387 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 17:52:09] 2025-06-04 08:51:48,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:52:09] 2025-06-04 08:51:48,402 | INFO     | job 6667365018 has completed (purged errors)
[2025-06-04 17:52:09] 2025-06-04 08:51:48,403 | INFO     | overall cleanup function is called
[2025-06-04 17:52:09] 2025-06-04 08:51:48,741 | INFO     | PID=1896273 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:52:09] 2025-06-04 08:51:48,741 | INFO     | .. there are 3 such processes running
[2025-06-04 17:52:09] 2025-06-04 08:51:49,408 | INFO     | --- collectZombieJob: --- 10, [1902850]
[2025-06-04 17:52:09] 2025-06-04 08:51:49,408 | INFO     | zombie collector waiting for pid 1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:49,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:52:09] 2025-06-04 08:51:49,408 | INFO     | collected zombie processes
[2025-06-04 17:52:09] 2025-06-04 08:51:49,409 | INFO     | will attempt to kill all subprocesses of pid=1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:49,469 | INFO     | process IDs to be killed: [1902850] (in reverse order)
[2025-06-04 17:52:09] 2025-06-04 08:51:49,504 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:52:09] 2025-06-04 08:51:49,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:52:09] 2025-06-04 08:51:49,507 | INFO     | did not find any defunct processes belonging to 1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:49,509 | INFO     | did not find any defunct processes belonging to 1902850
[2025-06-04 17:52:09] 2025-06-04 08:51:49,509 | INFO     | ready for new job
[2025-06-04 17:52:09] 2025-06-04 08:51:49,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:52:09] 2025-06-04 08:51:49,511 | INFO     | **************************************
[2025-06-04 17:52:09] 2025-06-04 08:51:49,511 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:52:09] 2025-06-04 08:51:49,511 | INFO     | **************************************
[2025-06-04 17:52:09] 2025-06-04 08:51:49,511 | INFO     | 
[2025-06-04 17:52:09] 2025-06-04 08:51:49,512 | INFO     | architecture information:
[2025-06-04 17:52:09] 2025-06-04 08:51:49,512 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:52:09] 2025-06-04 08:51:49,522 | INFO     | cat /etc/os-release:
[2025-06-04 17:52:09] NAME="CentOS Linux"
[2025-06-04 17:52:09] VERSION="7 (Core)"
[2025-06-04 17:52:09] ID="centos"
[2025-06-04 17:52:09] ID_LIKE="rhel fedora"
[2025-06-04 17:52:09] VERSION_ID="7"
[2025-06-04 17:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:52:09] ANSI_COLOR="0;31"
[2025-06-04 17:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:52:09] HOME_URL="https://www.centos.org/"
[2025-06-04 17:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:52:09] 
[2025-06-04 17:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:52:09] 
[2025-06-04 17:52:09] 2025-06-04 08:51:49,522 | INFO     | **************************************
[2025-06-04 17:52:09] 2025-06-04 08:51:50,025 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 17:52:09] 2025-06-04 08:51:50,036 | INFO     | sufficient remaining disk space (275882442752 B)
[2025-06-04 17:52:09] 2025-06-04 08:51:50,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:52:09] 2025-06-04 08:51:50,037 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:52:09] 2025-06-04 08:51:50,037 | INFO     | update_server=False
[2025-06-04 17:52:09] 2025-06-04 08:51:50,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:52:09] 2025-06-04 08:51:50,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:09] 2025-06-04 08:51:50,236 | INFO     | all job control threads have been joined
[2025-06-04 17:52:09] 2025-06-04 08:51:50,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:09] 2025-06-04 08:51:50,291 | INFO     | aborting loop
[2025-06-04 17:52:09] 2025-06-04 08:51:50,747 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:52:09] 2025-06-04 08:51:50,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:52:09] 2025-06-04 08:51:50,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:52:09] 2025-06-04 08:51:50,927 | INFO     | all data control threads have been joined
[2025-06-04 17:52:09] 2025-06-04 08:51:50,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:52:09] 2025-06-04 08:51:51,042 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,043 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,119 | INFO     | all payload control threads have been joined
[2025-06-04 17:52:09] 2025-06-04 08:51:51,183 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,202 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,241 | INFO     | [job] control thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,296 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,304 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,540 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:51,933 | INFO     | [data] control thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:52,108 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:52,124 | INFO     | [payload] control thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:52,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:52:09] 2025-06-04 08:51:52,399 | INFO     | [job] validate thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:52,543 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:52,943 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:51:56,315 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:52:00,943 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:52:09] 2025-06-04 08:52:01,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:52:09] 2025-06-04 08:52:03,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254815078208)>', '<ExcThread(monitor, started 140254036096768)>']
[2025-06-04 17:52:09] 2025-06-04 08:52:04,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:52:09] 2025-06-04 08:52:04,813 | INFO     | [monitor] control thread has ended
[2025-06-04 17:52:09] 2025-06-04 08:52:08,916 | INFO     | all workflow threads have been joined
[2025-06-04 17:52:09] 2025-06-04 08:52:08,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:52:09] 2025-06-04 08:52:08,917 | INFO     | traces error code: 0
[2025-06-04 17:52:09] 2025-06-04 08:52:08,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:52:09] 2025-06-04 08:52:09,008 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:52:09] 2025-06-04 08:52:09,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:52:09] 2025-06-04 08:52:09,010 [wrapper] pilotpid: 1896273
[2025-06-04 17:52:09] 2025-06-04 08:52:09,011 [wrapper] Pilot exit status: 0
[2025-06-04 17:52:09] 2025-06-04 08:52:09,015 [wrapper] pandaids: 6667365018
[2025-06-04 17:52:09] 2025-06-04 08:52:09,028 [wrapper] cleanup supervisor_pilot 2002314 1896274
[2025-06-04 17:52:09] 2025-06-04 08:52:09,029 [wrapper] Test setup, not cleaning
[2025-06-04 17:52:09] 2025-06-04 08:52:09,030 [wrapper] apfmon messages muted
[2025-06-04 17:52:09] 2025-06-04 08:52:09,032 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:52:09] 2025-06-04 08:52:09,033 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:52:09]  *** Error codes and diagnostics ***
[2025-06-04 17:52:09]     "exeErrorCode": 0,
[2025-06-04 17:52:09]     "exeErrorDiag": "",
[2025-06-04 17:52:09]     "pilotErrorCode": 0,
[2025-06-04 17:52:09]     "pilotErrorDiag": "",
[2025-06-04 17:52:09]  *** Listing of results directory ***
[2025-06-04 17:52:09] total 430612
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc    495897 May 28 01:39 pilot3.tar.gz
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc      5111 May 28 02:17 queuedata.json
[2025-06-04 17:52:09] -rwx------. 1 boinc boinc     37140 May 28 02:19 runpilot2-wrapper.sh
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:52:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:21 run_atlas
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:21 job.xml
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc      9509 Jun  4 16:21 init_data.xml
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc 225739316 Jun  4 16:21 EVNT.44871834._002781.pool.root.1
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:21 start_atlas.sh
[2025-06-04 17:52:09] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:21 shared
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc    508884 Jun  4 16:21 input.tar.gz
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:21 boinc_lockfile
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc      2558 Jun  4 16:21 pandaJob.out
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc    986745 Jun  4 16:21 agis_schedconf.cvmfs.json
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc   1603667 Jun  4 16:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:52:09] drwx------. 4 boinc boinc      4096 Jun  4 16:21 pilot3
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc 209783108 Jun  4 17:50 HITS.44871837._070796.pool.root.1
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc       529 Jun  4 17:50 boinc_task_state.xml
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc      1022 Jun  4 17:50 memory_monitor_summary.json
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc    271226 Jun  4 17:50 log.44871837._070796.job.log.tgz.1
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc      7669 Jun  4 17:51 heartbeat.json
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc        95 Jun  4 17:51 pilot_heartbeat.json
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:51 boinc_mmap_file
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc        27 Jun  4 17:51 wrapper_checkpoint.txt
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc      4426 Jun  4 17:52 pilotlog.txt
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc    527762 Jun  4 17:52 log.44871837._070796.job.log.1
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc       357 Jun  4 17:52 output.list
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:52 runtime_log
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc    819200 Jun  4 17:52 result.tar.gz
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc      8617 Jun  4 17:52 runtime_log.err
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc       642 Jun  4 17:52 fyXNDmS8Ce7n9Rq4apOajLDm4fhM0noT9bVof3QYDm39RKDmNM3dTo.diag
[2025-06-04 17:52:09] -rw-r--r--. 1 boinc boinc     22028 Jun  4 17:52 stderr.txt
[2025-06-04 17:52:09] HITS file was successfully produced:
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc 209783108 Jun  4 17:50 shared/HITS.pool.root.1
[2025-06-04 17:52:09]  *** Contents of shared directory: ***
[2025-06-04 17:52:09] total 426636
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc 225739316 Jun  4 16:21 ATLAS.root_0
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:21 start_atlas.sh
[2025-06-04 17:52:09] -rw-r--r--. 2 boinc boinc    508884 Jun  4 16:21 input.tar.gz
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc 209783108 Jun  4 17:50 HITS.pool.root.1
[2025-06-04 17:52:09] -rw-------. 1 boinc boinc    819200 Jun  4 17:52 result.tar.gz
17:52:10 (1892571): run_atlas exited; CPU time 27471.644211
17:52:10 (1892571): called boinc_finish(0)

</stderr_txt>
]]>

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