Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:14:56 (924484): wrapper (7.7.26015): starting
21:14:56 (924484): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:14:56] Arguments: --nthreads 12
[2025-06-03 21:14:56] Threads: 12
[2025-06-03 21:14:56] Checking for CVMFS
[2025-06-03 21:14:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:14:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:14:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:14:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:14:57] 2.11.5.0 1149562 32614 229992 146767 1 485 24264495 45568000 9283 130560 0 290504556 99.798 173269356 24541 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:14:57] CVMFS is ok
[2025-06-03 21:14:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:14:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:14:57] Further information can be found at the LHC@home message board.
[2025-06-03 21:14:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:14:57] Checking for apptainer binary...
[2025-06-03 21:14:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:14:57] Running /usr/bin/apptainer --version
[2025-06-03 21:14:57] apptainer version 1.4.0-1.el9
[2025-06-03 21:14:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:14:57] wns0121.triumf.lcg
[2025-06-03 21:14:57] apptainer works
[2025-06-03 21:14:57] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:14:57] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:14:57] Starting ATLAS job with PandaID=6678246435
[2025-06-03 21:14:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:17:58]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:17:58] 2025-06-04 04:17:45,363 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | found no stored workdir sizes
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | WARNING  | wrong length of table data, x=[1749010529.0], y=[2500.0] (must be same and length>=4)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . Timing measurements:
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . get job = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . initial setup = 2 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload setup = 4 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-in = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload execution = 15 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-out = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . log creation = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246435/pilotlog.txt
[2025-06-03 21:17:58] 2025-06-04 04:17:45,379 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:17:58] - Log from pilotlog.txt -
[2025-06-03 21:17:58] 2025-06-04 04:17:45,363 | INFO     | extracted standard info from prmon json
[2025-06-03 21:17:58] 2025-06-04 04:17:45,363 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | found no stored workdir sizes
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | WARNING  | wrong length of table data, x=[1749010529.0], y=[2500.0] (must be same and length>=4)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . Timing measurements:
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . get job = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . initial setup = 2 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload setup = 4 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-in = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload execution = 15 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-out = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . log creation = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246435/pilotlog.txt
[2025-06-03 21:17:58] 2025-06-04 04:17:45,379 | WARNING  | 
[2025-06-03 21:17:58] [begin log extracts]
[2025-06-03 21:17:58] - Log from pilotlog.txt -
[2025-06-03 21:17:58] 2025-06-04 04:17:45,363 | INFO     | extracted standard info from prmon json
[2025-06-03 21:17:58] 2025-06-04 04:17:45,363 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:17:58] 2025-06-04 04:17:45,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | WARNING  | found no stored workdir sizes
[2025-06-03 21:17:58] 2025-06-04 04:17:45,365 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | WARNING  | wrong length of table data, x=[1749010529.0], y=[2500.0] (must be same and length>=4)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . Timing measurements:
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . get job = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . initial setup = 2 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload setup = 4 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-in = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . payload execution = 15 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . stage-out = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,366 | INFO     | . log creation = 0 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | ..............................
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:17:58] 2025-06-04 04:17:45,367 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246435/pilotlog.txt
[2025-06-03 21:17:58] [end log extracts]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,379 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,380 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:17:58] 2025-06-04 04:17:45,956 | INFO     | 
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | job summary report
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | --------------------------------------------------
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | PanDA job id: 6678246435
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | task id: 45006595
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:15:37,420 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | pilot state: failed 
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | transexitcode: 65
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | exeerrorcode: 65
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | exitcode: 65
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,957 | INFO     | cpuconsumptiontime: 18 s
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | nevents: 0
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | neventsw: 0
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | pid: 935178
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | pgrp: 935178
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | corecount: 12
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | event service: False
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | sizes: {0: 2405181, 4: 2405387, 11: 2405415, 23: 2428563, 24: 2432826, 145: 2432940}
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | --------------------------------------------------
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | 
[2025-06-03 21:17:58] 2025-06-04 04:17:45,958 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:17:58] 2025-06-04 04:17:45,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,978 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:17:58] 2025-06-04 04:17:45,980 | INFO     | job 6678246435 has completed (purged errors)
[2025-06-03 21:17:58] 2025-06-04 04:17:45,980 | INFO     | overall cleanup function is called
[2025-06-03 21:17:58] 2025-06-04 04:17:46,986 | INFO     | --- collectZombieJob: --- 10, [935178]
[2025-06-03 21:17:58] 2025-06-04 04:17:46,986 | INFO     | zombie collector waiting for pid 935178
[2025-06-03 21:17:58] 2025-06-04 04:17:46,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:17:58] 2025-06-04 04:17:46,986 | INFO     | collected zombie processes
[2025-06-03 21:17:58] 2025-06-04 04:17:46,986 | INFO     | will attempt to kill all subprocesses of pid=935178
[2025-06-03 21:17:58] 2025-06-04 04:17:47,205 | INFO     | process IDs to be killed: [935178] (in reverse order)
[2025-06-03 21:17:58] 2025-06-04 04:17:47,283 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:17:58] 2025-06-04 04:17:47,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:17:58] 2025-06-04 04:17:47,291 | INFO     | did not find any defunct processes belonging to 935178
[2025-06-03 21:17:58] 2025-06-04 04:17:47,299 | INFO     | did not find any defunct processes belonging to 935178
[2025-06-03 21:17:58] 2025-06-04 04:17:47,299 | INFO     | ready for new job
[2025-06-03 21:17:58] 2025-06-04 04:17:47,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:17:58] 2025-06-04 04:17:47,300 | INFO     | **************************************
[2025-06-03 21:17:58] 2025-06-04 04:17:47,301 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:17:58] 2025-06-04 04:17:47,301 | INFO     | **************************************
[2025-06-03 21:17:58] 2025-06-04 04:17:47,301 | INFO     | 
[2025-06-03 21:17:58] 2025-06-04 04:17:47,303 | INFO     | architecture information:
[2025-06-03 21:17:58] 2025-06-04 04:17:47,304 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:17:58] 2025-06-04 04:17:47,317 | INFO     | cat /etc/os-release:
[2025-06-03 21:17:58] NAME="CentOS Linux"
[2025-06-03 21:17:58] VERSION="7 (Core)"
[2025-06-03 21:17:58] ID="centos"
[2025-06-03 21:17:58] ID_LIKE="rhel fedora"
[2025-06-03 21:17:58] VERSION_ID="7"
[2025-06-03 21:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:17:58] ANSI_COLOR="0;31"
[2025-06-03 21:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:17:58] HOME_URL="https://www.centos.org/"
[2025-06-03 21:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:17:58] 
[2025-06-03 21:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:17:58] 
[2025-06-03 21:17:58] 2025-06-04 04:17:47,318 | INFO     | **************************************
[2025-06-03 21:17:58] 2025-06-04 04:17:47,820 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:17:58] 2025-06-04 04:17:47,834 | INFO     | sufficient remaining disk space (2076291629056 B)
[2025-06-03 21:17:58] 2025-06-04 04:17:47,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:17:58] 2025-06-04 04:17:47,835 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:17:58] 2025-06-04 04:17:47,835 | INFO     | update_server=False
[2025-06-03 21:17:58] 2025-06-04 04:17:47,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:17:58] 2025-06-04 04:17:47,835 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:17:58] 2025-06-04 04:17:47,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:17:58] 2025-06-04 04:17:47,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:17:58] 2025-06-04 04:17:47,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:17:58] 2025-06-04 04:17:47,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:58] 2025-06-04 04:17:47,836 | INFO     | aborting loop
[2025-06-03 21:17:58] 2025-06-04 04:17:48,277 | INFO     | all job control threads have been joined
[2025-06-03 21:17:58] 2025-06-04 04:17:48,378 | INFO     | all data control threads have been joined
[2025-06-03 21:17:58] 2025-06-04 04:17:48,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:17:58] 2025-06-04 04:17:48,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:17:58] 2025-06-04 04:17:48,720 | INFO     | all payload control threads have been joined
[2025-06-03 21:17:58] 2025-06-04 04:17:48,841 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:48,841 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:48,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:48,926 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:49,236 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:49,283 | INFO     | [job] control thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:49,384 | INFO     | [data] control thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:49,726 | INFO     | [payload] control thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:49,973 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:50,032 | INFO     | [job] validate thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:50,193 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:50,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:50,377 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:50,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:17:58] 2025-06-04 04:17:50,471 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:51,472 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:52,496 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:17:58] 2025-06-04 04:17:53,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888084473664)>', '<ExcThread(monitor, started 139887403587328)>']
[2025-06-03 21:17:58] 2025-06-04 04:17:53,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:17:58] 2025-06-04 04:17:53,866 | INFO     | [monitor] control thread has ended
[2025-06-03 21:17:58] 2025-06-04 04:17:58,138 | INFO     | all workflow threads have been joined
[2025-06-03 21:17:58] 2025-06-04 04:17:58,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:17:58] 2025-06-04 04:17:58,139 | INFO     | traces error code: 0
[2025-06-03 21:17:58] 2025-06-04 04:17:58,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:17:58] 2025-06-04 04:17:58,280 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:17:58] 2025-06-04 04:17:58,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:17:58] 2025-06-04 04:17:58,285 [wrapper] pilotpid: 928219
[2025-06-03 21:17:58] 2025-06-04 04:17:58,288 [wrapper] Pilot exit status: 0
[2025-06-03 21:17:58] 2025-06-04 04:17:58,298 [wrapper] pandaids: 6678246435
[2025-06-03 21:17:58] 2025-06-04 04:17:58,355 [wrapper] cleanup supervisor_pilot  928225 928220
[2025-06-03 21:17:58] 2025-06-04 04:17:58,358 [wrapper] Test setup, not cleaning
[2025-06-03 21:17:58] 2025-06-04 04:17:58,361 [wrapper] apfmon messages muted
[2025-06-03 21:17:58] 2025-06-04 04:17:58,363 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:17:58] 2025-06-04 04:17:58,366 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:17:58]  *** Error codes and diagnostics ***
[2025-06-03 21:17:58]     "exeErrorCode": 65,
[2025-06-03 21:17:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:17:58]     "pilotErrorCode": 1305,
[2025-06-03 21:17:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:17:58]  *** Listing of results directory ***
[2025-06-03 21:17:58] total 213472
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:59 pilot3.tar.gz
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:02 queuedata.json
[2025-06-03 21:17:58] -rwx------. 1 boinc boinc     37140 Jun  3 19:02 runpilot2-wrapper.sh
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:17:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:14 run_atlas
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:14 job.xml
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc      6596 Jun  3 21:14 init_data.xml
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc 214577005 Jun  3 21:14 EVNT.45006593._002010.pool.root.1
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:14 start_atlas.sh
[2025-06-03 21:17:58] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:14 shared
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc    508885 Jun  3 21:14 input.tar.gz
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:14 boinc_lockfile
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:14 pandaJob.out
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc    986077 Jun  3 21:15 agis_schedconf.cvmfs.json
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc   1603667 Jun  3 21:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:17:58] drwx------. 4 boinc boinc      4096 Jun  3 21:15 pilot3
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc       523 Jun  3 21:15 boinc_task_state.xml
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc       964 Jun  3 21:15 memory_monitor_summary.json
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc     20451 Jun  3 21:15 log.45006595._050142.job.log.tgz.1
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc        95 Jun  3 21:17 pilot_heartbeat.json
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc      8318 Jun  3 21:17 heartbeat.json
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc        22 Jun  3 21:17 wrapper_checkpoint.txt
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:17 boinc_mmap_file
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc      4475 Jun  3 21:17 pilotlog.txt
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc     72593 Jun  3 21:17 log.45006595._050142.job.log.1
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc       188 Jun  3 21:17 output.list
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:17 runtime_log
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc    112640 Jun  3 21:17 result.tar.gz
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:17 runtime_log.err
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc       645 Jun  3 21:17 BzFMDmYdsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2nmKDm0H2cjm.diag
[2025-06-03 21:17:58] -rw-r--r--. 1 boinc boinc     21459 Jun  3 21:17 stderr.txt
[2025-06-03 21:17:58] No HITS result produced
[2025-06-03 21:17:58]  *** Contents of shared directory: ***
[2025-06-03 21:17:58] total 210180
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc 214577005 Jun  3 21:14 ATLAS.root_0
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:14 start_atlas.sh
[2025-06-03 21:17:58] -rw-r--r--. 2 boinc boinc    508885 Jun  3 21:14 input.tar.gz
[2025-06-03 21:17:58] -rw-------. 1 boinc boinc    112640 Jun  3 21:17 result.tar.gz
21:18:00 (924484): run_atlas exited; CPU time 22.468879
21:18:00 (924484): called boinc_finish(0)

</stderr_txt>
]]>

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