Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:20 (1255643): wrapper (7.7.26015): starting
21:21:20 (1255643): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:21:20] Arguments: --nthreads 12
[2025-06-03 21:21:20] Threads: 12
[2025-06-03 21:21:20] Checking for CVMFS
[2025-06-03 21:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:21:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:21:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:21:21] 2.11.5.0 1149562 32621 230396 146768 2 483 24356389 45568000 16367 130560 0 290934486 99.798 173330657 24547 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:21:21] CVMFS is ok
[2025-06-03 21:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:21:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:21:21] Further information can be found at the LHC@home message board.
[2025-06-03 21:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:21:21] Checking for apptainer binary...
[2025-06-03 21:21:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:21:21] Running /usr/bin/apptainer --version
[2025-06-03 21:21:21] apptainer version 1.4.0-1.el9
[2025-06-03 21:21:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:21:21] wns0121.triumf.lcg
[2025-06-03 21:21:21] apptainer works
[2025-06-03 21:21:21] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:21:21] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:21:21] Starting ATLAS job with PandaID=6678246819
[2025-06-03 21:21:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:25:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard info from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | found no stored workdir sizes
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | WARNING  | wrong length of table data, x=[1749010934.0], y=[1758.0] (must be same and length>=4)
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . Timing measurements:
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . get job = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . initial setup = 3 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload setup = 9 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-in = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload execution = 28 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-out = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . log creation = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246819/pilotlog.txt
[2025-06-03 21:25:07] 2025-06-04 04:24:50,462 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:25:07] - Log from pilotlog.txt -
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard info from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | found no stored workdir sizes
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | WARNING  | wrong length of table data, x=[1749010934.0], y=[1758.0] (must be same and length>=4)
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . Timing measurements:
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . get job = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . initial setup = 3 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload setup = 9 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-in = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload execution = 28 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-out = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . log creation = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246819/pilotlog.txt
[2025-06-03 21:25:07] 2025-06-04 04:24:50,462 | WARNING  | 
[2025-06-03 21:25:07] [begin log extracts]
[2025-06-03 21:25:07] - Log from pilotlog.txt -
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard info from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:25:07] 2025-06-04 04:24:50,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | WARNING  | found no stored workdir sizes
[2025-06-03 21:25:07] 2025-06-04 04:24:50,402 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | WARNING  | wrong length of table data, x=[1749010934.0], y=[1758.0] (must be same and length>=4)
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . Timing measurements:
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . get job = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . initial setup = 3 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload setup = 9 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-in = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . payload execution = 28 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . stage-out = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | . log creation = 0 s
[2025-06-03 21:25:07] 2025-06-04 04:24:50,403 | INFO     | ..............................
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:25:07] 2025-06-04 04:24:50,404 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246819/pilotlog.txt
[2025-06-03 21:25:07] [end log extracts]
[2025-06-03 21:25:07] 2025-06-04 04:24:50,462 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:25:07] 2025-06-04 04:24:50,467 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:25:07] 2025-06-04 04:24:51,009 | INFO     | 
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | job summary report
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | --------------------------------------------------
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | PanDA job id: 6678246819
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | task id: 45006595
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:22:30,732 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | pilot state: failed 
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | transexitcode: 65
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | exeerrorcode: 65
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | exitcode: 65
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:25:07] 2025-06-04 04:24:51,010 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | nevents: 0
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | neventsw: 0
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | pid: 1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | pgrp: 1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | corecount: 12
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | event service: False
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | sizes: {0: 2405004, 1: 2405203, 10: 2405409, 12: 2405437, 42: 2428639, 44: 2432874, 48: 2433030, 175: 2433172}
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | --------------------------------------------------
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | 
[2025-06-03 21:25:07] 2025-06-04 04:24:51,011 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:25:07] 2025-06-04 04:24:51,111 | INFO     | job 6678246819 has completed (purged errors)
[2025-06-03 21:25:07] 2025-06-04 04:24:51,112 | INFO     | overall cleanup function is called
[2025-06-03 21:25:07] 2025-06-04 04:24:52,118 | INFO     | --- collectZombieJob: --- 10, [1276787]
[2025-06-03 21:25:07] 2025-06-04 04:24:52,119 | INFO     | zombie collector waiting for pid 1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:52,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:25:07] 2025-06-04 04:24:52,119 | INFO     | collected zombie processes
[2025-06-03 21:25:07] 2025-06-04 04:24:52,119 | INFO     | will attempt to kill all subprocesses of pid=1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:52,641 | INFO     | process IDs to be killed: [1276787] (in reverse order)
[2025-06-03 21:25:07] 2025-06-04 04:24:52,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:25:07] 2025-06-04 04:24:52,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:25:07] 2025-06-04 04:24:52,752 | INFO     | did not find any defunct processes belonging to 1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:52,762 | INFO     | did not find any defunct processes belonging to 1276787
[2025-06-03 21:25:07] 2025-06-04 04:24:52,763 | INFO     | ready for new job
[2025-06-03 21:25:07] 2025-06-04 04:24:52,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:25:07] 2025-06-04 04:24:52,765 | INFO     | **************************************
[2025-06-03 21:25:07] 2025-06-04 04:24:52,765 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:25:07] 2025-06-04 04:24:52,765 | INFO     | **************************************
[2025-06-03 21:25:07] 2025-06-04 04:24:52,765 | INFO     | 
[2025-06-03 21:25:07] 2025-06-04 04:24:52,767 | INFO     | architecture information:
[2025-06-03 21:25:07] 2025-06-04 04:24:52,768 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:25:07] 2025-06-04 04:24:52,809 | INFO     | cat /etc/os-release:
[2025-06-03 21:25:07] NAME="CentOS Linux"
[2025-06-03 21:25:07] VERSION="7 (Core)"
[2025-06-03 21:25:07] ID="centos"
[2025-06-03 21:25:07] ID_LIKE="rhel fedora"
[2025-06-03 21:25:07] VERSION_ID="7"
[2025-06-03 21:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:25:07] ANSI_COLOR="0;31"
[2025-06-03 21:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:25:07] HOME_URL="https://www.centos.org/"
[2025-06-03 21:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:25:07] 
[2025-06-03 21:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:25:07] 
[2025-06-03 21:25:07] 2025-06-04 04:24:52,810 | INFO     | **************************************
[2025-06-03 21:25:07] 2025-06-04 04:24:53,313 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:25:07] 2025-06-04 04:24:53,328 | INFO     | sufficient remaining disk space (1948528934912 B)
[2025-06-03 21:25:07] 2025-06-04 04:24:53,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:25:07] 2025-06-04 04:24:53,329 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:25:07] 2025-06-04 04:24:53,329 | INFO     | update_server=False
[2025-06-03 21:25:07] 2025-06-04 04:24:53,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:25:07] 2025-06-04 04:24:53,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:25:07] 2025-06-04 04:24:53,329 | INFO     | aborting loop
[2025-06-03 21:25:07] 2025-06-04 04:24:53,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:25:07] 2025-06-04 04:24:53,826 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:25:07] 2025-06-04 04:24:53,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:25:07] 2025-06-04 04:24:53,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:25:07] 2025-06-04 04:24:54,205 | INFO     | all data control threads have been joined
[2025-06-03 21:25:07] 2025-06-04 04:24:54,335 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:54,335 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:54,354 | INFO     | all payload control threads have been joined
[2025-06-03 21:25:07] 2025-06-04 04:24:54,487 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:54,598 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:54,781 | INFO     | all job control threads have been joined
[2025-06-03 21:25:07] 2025-06-04 04:24:54,884 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,191 | INFO     | [job] validate thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,212 | INFO     | [data] control thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,361 | INFO     | [payload] control thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,396 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,408 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,437 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,437 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:55,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:25:07] 2025-06-04 04:24:55,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:25:07] 2025-06-04 04:24:55,786 | INFO     | [job] control thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:56,619 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:24:59,790 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:25:07] 2025-06-04 04:25:01,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884518041408)>', '<ExcThread(monitor, started 139883444164352)>']
[2025-06-03 21:25:07] 2025-06-04 04:25:01,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:25:07] 2025-06-04 04:25:01,887 | INFO     | [monitor] control thread has ended
[2025-06-03 21:25:07] 2025-06-04 04:25:06,815 | INFO     | all workflow threads have been joined
[2025-06-03 21:25:07] 2025-06-04 04:25:06,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:25:07] 2025-06-04 04:25:06,816 | INFO     | traces error code: 0
[2025-06-03 21:25:07] 2025-06-04 04:25:06,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:25:07] 2025-06-04 04:25:06,957 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:25:07] 2025-06-04 04:25:06,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:25:07] 2025-06-04 04:25:06,963 [wrapper] pilotpid: 1262832
[2025-06-03 21:25:07] 2025-06-04 04:25:06,965 [wrapper] Pilot exit status: 0
[2025-06-03 21:25:07] 2025-06-04 04:25:06,975 [wrapper] pandaids: 6678246819
[2025-06-03 21:25:07] 2025-06-04 04:25:07,038 [wrapper] cleanup supervisor_pilot 1262844 1262833
[2025-06-03 21:25:07] 2025-06-04 04:25:07,041 [wrapper] Test setup, not cleaning
[2025-06-03 21:25:07] 2025-06-04 04:25:07,044 [wrapper] apfmon messages muted
[2025-06-03 21:25:07] 2025-06-04 04:25:07,046 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:25:07] 2025-06-04 04:25:07,049 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:25:07]  *** Error codes and diagnostics ***
[2025-06-03 21:25:07]     "exeErrorCode": 65,
[2025-06-03 21:25:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:25:07]     "pilotErrorCode": 1305,
[2025-06-03 21:25:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:25:07]  *** Listing of results directory ***
[2025-06-03 21:25:07] total 213016
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:59 pilot3.tar.gz
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:02 queuedata.json
[2025-06-03 21:25:07] -rwx------. 1 boinc boinc     37140 Jun  3 19:02 runpilot2-wrapper.sh
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:25:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:21 run_atlas
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:21 job.xml
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc 214098452 Jun  3 21:21 EVNT.45006593._002011.pool.root.1
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc      6596 Jun  3 21:21 init_data.xml
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc    508879 Jun  3 21:21 input.tar.gz
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:21 start_atlas.sh
[2025-06-03 21:25:07] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:21 shared
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:21 boinc_lockfile
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc      2522 Jun  3 21:21 pandaJob.out
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc    986745 Jun  3 21:21 agis_schedconf.cvmfs.json
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc   1603667 Jun  3 21:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:25:07] drwx------. 4 boinc boinc      4096 Jun  3 21:21 pilot3
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc       959 Jun  3 21:22 memory_monitor_summary.json
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc     20632 Jun  3 21:22 log.45006595._050147.job.log.tgz.1
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc        95 Jun  3 21:24 pilot_heartbeat.json
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc      8318 Jun  3 21:24 heartbeat.json
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc       523 Jun  3 21:24 boinc_task_state.xml
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc        22 Jun  3 21:25 wrapper_checkpoint.txt
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:25 boinc_mmap_file
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc      4352 Jun  3 21:25 pilotlog.txt
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc     74587 Jun  3 21:25 log.45006595._050147.job.log.1
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc       188 Jun  3 21:25 output.list
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:25 runtime_log
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc    112640 Jun  3 21:25 result.tar.gz
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc       644 Jun  3 21:25 XqLMDmYdsg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7nmKDmMm7T8n.diag
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:25 runtime_log.err
[2025-06-03 21:25:07] -rw-r--r--. 1 boinc boinc     21452 Jun  3 21:25 stderr.txt
[2025-06-03 21:25:07] No HITS result produced
[2025-06-03 21:25:07]  *** Contents of shared directory: ***
[2025-06-03 21:25:07] total 209716
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc 214098452 Jun  3 21:21 ATLAS.root_0
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc    508879 Jun  3 21:21 input.tar.gz
[2025-06-03 21:25:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:21 start_atlas.sh
[2025-06-03 21:25:07] -rw-------. 1 boinc boinc    112640 Jun  3 21:25 result.tar.gz
21:25:08 (1255643): run_atlas exited; CPU time 26.652930
21:25:08 (1255643): called boinc_finish(0)

</stderr_txt>
]]>

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