Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:08:24 (1808710): wrapper (7.7.26015): starting
21:08:24 (1808710): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:08:24] Arguments: --nthreads 12
[2025-06-03 21:08:24] Threads: 12
[2025-06-03 21:08:24] Checking for CVMFS
[2025-06-03 21:08:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:08:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:08:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:08:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:08:25] 2.11.5.0 2109152 23099 320548 146767 2 474 23430574 45568001 11551 130560 0 274311687 99.851 128080874 26963 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:08:25] CVMFS is ok
[2025-06-03 21:08:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:08:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:08:25] Further information can be found at the LHC@home message board.
[2025-06-03 21:08:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:08:25] Checking for apptainer binary...
[2025-06-03 21:08:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:08:25] Running /usr/bin/apptainer --version
[2025-06-03 21:08:25] apptainer version 1.4.0-1.el9
[2025-06-03 21:08:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:08:25] wns0078.triumf.lcg
[2025-06-03 21:08:25] apptainer works
[2025-06-03 21:08:25] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:08:25] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:08:25] Starting ATLAS job with PandaID=6678246267
[2025-06-03 21:08:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:11:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | found no stored workdir sizes
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | WARNING  | wrong length of table data, x=[1749010157.0], y=[1997.0] (must be same and length>=4)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . Timing measurements:
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . get job = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . initial setup = 3 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload setup = 10 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-in = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload execution = 24 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-out = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . log creation = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246267/pilotlog.txt
[2025-06-03 21:11:56] 2025-06-04 04:11:44,234 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:11:56] - Log from pilotlog.txt -
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | INFO     | extracted standard info from prmon json
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | found no stored workdir sizes
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | WARNING  | wrong length of table data, x=[1749010157.0], y=[1997.0] (must be same and length>=4)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . Timing measurements:
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . get job = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . initial setup = 3 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload setup = 10 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-in = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload execution = 24 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-out = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . log creation = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246267/pilotlog.txt
[2025-06-03 21:11:56] 2025-06-04 04:11:44,234 | WARNING  | 
[2025-06-03 21:11:56] [begin log extracts]
[2025-06-03 21:11:56] - Log from pilotlog.txt -
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | INFO     | extracted standard info from prmon json
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:11:56] 2025-06-04 04:11:44,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | WARNING  | found no stored workdir sizes
[2025-06-03 21:11:56] 2025-06-04 04:11:44,217 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | WARNING  | wrong length of table data, x=[1749010157.0], y=[1997.0] (must be same and length>=4)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . Timing measurements:
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . get job = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . initial setup = 3 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload setup = 10 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-in = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . payload execution = 24 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . stage-out = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | . log creation = 0 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,219 | INFO     | ..............................
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:11:56] 2025-06-04 04:11:44,220 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246267/pilotlog.txt
[2025-06-03 21:11:56] [end log extracts]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,235 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,235 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:11:56] 2025-06-04 04:11:44,307 | INFO     | 
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | job summary report
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | --------------------------------------------------
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | PanDA job id: 6678246267
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | task id: 45006595
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:09:29,560 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | pilot state: failed 
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | transexitcode: 65
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | exeerrorcode: 65
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | exitcode: 65
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | nevents: 0
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | neventsw: 0
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | pid: 1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | pgrp: 1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | corecount: 12
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | event service: False
[2025-06-03 21:11:56] 2025-06-04 04:11:44,314 | INFO     | sizes: {0: 2405179, 7: 2405385, 11: 2405413, 37: 2428613, 38: 2432852, 164: 2432966}
[2025-06-03 21:11:56] 2025-06-04 04:11:44,315 | INFO     | --------------------------------------------------
[2025-06-03 21:11:56] 2025-06-04 04:11:44,315 | INFO     | 
[2025-06-03 21:11:56] 2025-06-04 04:11:44,315 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:11:56] 2025-06-04 04:11:44,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | job 6678246267 has completed (purged errors)
[2025-06-03 21:11:56] 2025-06-04 04:11:44,361 | INFO     | overall cleanup function is called
[2025-06-03 21:11:56] 2025-06-04 04:11:45,368 | INFO     | --- collectZombieJob: --- 10, [1831927]
[2025-06-03 21:11:56] 2025-06-04 04:11:45,368 | INFO     | zombie collector waiting for pid 1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:45,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:11:56] 2025-06-04 04:11:45,368 | INFO     | collected zombie processes
[2025-06-03 21:11:56] 2025-06-04 04:11:45,368 | INFO     | will attempt to kill all subprocesses of pid=1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:45,657 | INFO     | process IDs to be killed: [1831927] (in reverse order)
[2025-06-03 21:11:56] 2025-06-04 04:11:45,757 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:11:56] 2025-06-04 04:11:45,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:11:56] 2025-06-04 04:11:45,766 | INFO     | did not find any defunct processes belonging to 1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:45,774 | INFO     | did not find any defunct processes belonging to 1831927
[2025-06-03 21:11:56] 2025-06-04 04:11:45,774 | INFO     | ready for new job
[2025-06-03 21:11:56] 2025-06-04 04:11:45,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:11:56] 2025-06-04 04:11:45,775 | INFO     | **************************************
[2025-06-03 21:11:56] 2025-06-04 04:11:45,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:11:56] 2025-06-04 04:11:45,775 | INFO     | **************************************
[2025-06-03 21:11:56] 2025-06-04 04:11:45,775 | INFO     | 
[2025-06-03 21:11:56] 2025-06-04 04:11:45,777 | INFO     | architecture information:
[2025-06-03 21:11:56] 2025-06-04 04:11:45,778 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:11:56] 2025-06-04 04:11:45,794 | INFO     | cat /etc/os-release:
[2025-06-03 21:11:56] NAME="CentOS Linux"
[2025-06-03 21:11:56] VERSION="7 (Core)"
[2025-06-03 21:11:56] ID="centos"
[2025-06-03 21:11:56] ID_LIKE="rhel fedora"
[2025-06-03 21:11:56] VERSION_ID="7"
[2025-06-03 21:11:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:11:56] ANSI_COLOR="0;31"
[2025-06-03 21:11:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:11:56] HOME_URL="https://www.centos.org/"
[2025-06-03 21:11:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:11:56] 
[2025-06-03 21:11:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:11:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:11:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:11:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:11:56] 
[2025-06-03 21:11:56] 2025-06-04 04:11:45,795 | INFO     | **************************************
[2025-06-03 21:11:56] 2025-06-04 04:11:46,298 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:11:56] 2025-06-04 04:11:46,314 | INFO     | sufficient remaining disk space (1855158484992 B)
[2025-06-03 21:11:56] 2025-06-04 04:11:46,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:11:56] 2025-06-04 04:11:46,315 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:11:56] 2025-06-04 04:11:46,315 | INFO     | update_server=False
[2025-06-03 21:11:56] 2025-06-04 04:11:46,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:11:56] 2025-06-04 04:11:46,315 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:11:56] 2025-06-04 04:11:46,316 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:11:56] 2025-06-04 04:11:46,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:11:56] 2025-06-04 04:11:46,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:11:56] 2025-06-04 04:11:46,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:11:56] 2025-06-04 04:11:46,602 | INFO     | all payload control threads have been joined
[2025-06-03 21:11:56] 2025-06-04 04:11:46,806 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 21:11:56] 2025-06-04 04:11:46,806 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 21:11:56] 2025-06-04 04:11:46,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:11:56] 2025-06-04 04:11:46,806 | INFO     | will abort loop
[2025-06-03 21:11:56] 2025-06-04 04:11:46,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:11:56] 2025-06-04 04:11:47,150 | INFO     | all job control threads have been joined
[2025-06-03 21:11:56] 2025-06-04 04:11:47,289 | INFO     | all data control threads have been joined
[2025-06-03 21:11:56] 2025-06-04 04:11:47,321 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:47,596 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:47,608 | INFO     | [payload] control thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:47,812 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:47,983 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:47,986 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,120 | INFO     | [job] validate thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,156 | INFO     | [job] control thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,246 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,294 | INFO     | [data] control thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,427 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,759 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:48,812 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:49,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:11:56] 2025-06-04 04:11:50,325 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:50,328 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:11:56] 2025-06-04 04:11:50,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201637824320)>', '<ExcThread(monitor, started 140200860698368)>']
[2025-06-03 21:11:56] 2025-06-04 04:11:51,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:11:56] 2025-06-04 04:11:51,353 | INFO     | [monitor] control thread has ended
[2025-06-03 21:11:56] 2025-06-04 04:11:55,965 | INFO     | all workflow threads have been joined
[2025-06-03 21:11:56] 2025-06-04 04:11:55,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:11:56] 2025-06-04 04:11:55,965 | INFO     | traces error code: 0
[2025-06-03 21:11:56] 2025-06-04 04:11:55,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:11:56] 2025-06-04 04:11:56,091 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:11:56] 2025-06-04 04:11:56,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:11:56] 2025-06-04 04:11:56,096 [wrapper] pilotpid: 1817368
[2025-06-03 21:11:56] 2025-06-04 04:11:56,099 [wrapper] Pilot exit status: 0
[2025-06-03 21:11:56] 2025-06-04 04:11:56,137 [wrapper] pandaids: 6678246267
[2025-06-03 21:11:56] 2025-06-04 04:11:56,183 [wrapper] cleanup supervisor_pilot 1817379 1817369
[2025-06-03 21:11:56] 2025-06-04 04:11:56,186 [wrapper] Test setup, not cleaning
[2025-06-03 21:11:56] 2025-06-04 04:11:56,190 [wrapper] apfmon messages muted
[2025-06-03 21:11:56] 2025-06-04 04:11:56,193 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:11:56] 2025-06-04 04:11:56,197 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:11:56]  *** Error codes and diagnostics ***
[2025-06-03 21:11:56]     "exeErrorCode": 65,
[2025-06-03 21:11:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:11:56]     "pilotErrorCode": 1305,
[2025-06-03 21:11:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:11:56]  *** Listing of results directory ***
[2025-06-03 21:11:56] total 212888
[2025-06-03 21:11:56] -rwx------. 1 boinc boinc     37140 Jun  3 18:59 runpilot2-wrapper.sh
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:59 queuedata.json
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:59 pilot3.tar.gz
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:11:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:08 run_atlas
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:08 job.xml
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc      6601 Jun  3 21:08 init_data.xml
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc 213973844 Jun  3 21:08 EVNT.45006593._002004.pool.root.1
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:08 start_atlas.sh
[2025-06-03 21:11:56] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:08 shared
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc    508875 Jun  3 21:08 input.tar.gz
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:08 boinc_lockfile
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc      2524 Jun  3 21:08 pandaJob.out
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc    986077 Jun  3 21:08 agis_schedconf.cvmfs.json
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc   1603667 Jun  3 21:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:11:56] drwx------. 4 boinc boinc      4096 Jun  3 21:08 pilot3
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc       522 Jun  3 21:09 boinc_task_state.xml
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc       962 Jun  3 21:09 memory_monitor_summary.json
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc     20442 Jun  3 21:09 log.45006595._049974.job.log.tgz.1
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc        95 Jun  3 21:11 pilot_heartbeat.json
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc      8326 Jun  3 21:11 heartbeat.json
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc      4661 Jun  3 21:11 pilotlog.txt
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc        22 Jun  3 21:11 wrapper_checkpoint.txt
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:11 boinc_mmap_file
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc     74715 Jun  3 21:11 log.45006595._049974.job.log.1
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc       188 Jun  3 21:11 output.list
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:11 runtime_log
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc    112640 Jun  3 21:11 result.tar.gz
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:11 runtime_log.err
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc       644 Jun  3 21:11 CRBODmcasg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaTaKDmbAbYum.diag
[2025-06-03 21:11:56] -rw-r--r--. 1 boinc boinc     21042 Jun  3 21:11 stderr.txt
[2025-06-03 21:11:56] No HITS result produced
[2025-06-03 21:11:56]  *** Contents of shared directory: ***
[2025-06-03 21:11:56] total 209592
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc 213973844 Jun  3 21:08 ATLAS.root_0
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:08 start_atlas.sh
[2025-06-03 21:11:56] -rw-r--r--. 2 boinc boinc    508875 Jun  3 21:08 input.tar.gz
[2025-06-03 21:11:56] -rw-------. 1 boinc boinc    112640 Jun  3 21:11 result.tar.gz
21:11:58 (1808710): run_atlas exited; CPU time 22.085897
21:11:58 (1808710): called boinc_finish(0)

</stderr_txt>
]]>

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