Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:11:43 (25358): wrapper (7.7.26015): starting
20:11:43 (25358): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:11:43] Arguments: --nthreads 8
[2025-06-04 20:11:43] Threads: 8
[2025-06-04 20:11:43] Checking for CVMFS
[2025-06-04 20:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:11:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:11:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:11:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:11:45] 2.11.2.0 7869 33564 89908 146790 3 153 14893217 25165824 3245 130560 0 16782809 99.766 20239022 2024 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 20:11:45] CVMFS is ok
[2025-06-04 20:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:11:45] Checking for apptainer binary...
[2025-06-04 20:11:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:11:45] Running /usr/bin/apptainer --version
[2025-06-04 20:11:45] apptainer version 1.3.2-1.el7
[2025-06-04 20:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:11:47] cg-vwn276.simple-grid.lan
[2025-06-04 20:11:47] apptainer works
[2025-06-04 20:11:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:11:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:11:47] Starting ATLAS job with PandaID=6678155189
[2025-06-04 20:11:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:36:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:36:11] 2025-06-04 21:56:02,683 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678155189/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,684 | INFO     | extracted standard info from prmon json
[2025-06-05 00:36:11] 2025-06-04 21:56:02,684 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:36:11] 2025-06-04 21:56:02,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:36:11] 2025-06-04 21:56:02,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:36:11] 2025-06-04 21:56:02,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:36:11] 2025-06-04 21:56:02,690 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:36:11] 2025-06-04 21:56:02,690 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 00:36:11] 2025-06-04 21:56:02,692 | INFO     | sum of deviations: 13158169822.000002
[2025-06-05 00:36:11] 2025-06-04 21:56:02,692 | INFO     | mean x: 1749067405.5
[2025-06-05 00:36:11] 2025-06-04 21:56:02,692 | INFO     | mean y: 2468932.6788990824
[2025-06-05 00:36:11] 2025-06-04 21:56:02,692 | INFO     | -- intersect: -7161657926.675727
[2025-06-05 00:36:11] 2025-06-04 21:56:02,693 | INFO     | intersect: -7161657926.675727
[2025-06-05 00:36:11] 2025-06-04 21:56:02,693 | INFO     | chi2: 2.603859110537627
[2025-06-05 00:36:11] 2025-06-04 21:56:02,693 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,695 | INFO     | sum of deviations: 27217114870.999992
[2025-06-05 00:36:11] 2025-06-04 21:56:02,695 | INFO     | mean x: 1749067253.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,695 | INFO     | mean y: 2478669.779342723
[2025-06-05 00:36:11] 2025-06-04 21:56:02,695 | INFO     | -- intersect: -15884486131.416584
[2025-06-05 00:36:11] 2025-06-04 21:56:02,696 | INFO     | intersect: -15884486131.416584
[2025-06-05 00:36:11] 2025-06-04 21:56:02,696 | INFO     | chi2: 1.8373732257158917
[2025-06-05 00:36:11] 2025-06-04 21:56:02,696 | INFO     | current chi2=1.8373732257158917 (change=29.436534477607605 %)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,696 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,705 | INFO     | sum of deviations: 26688271406.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | mean x: 1749067100.5
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | mean y: 2478278.4134615385
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | -- intersect: -16726465665.936447
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | intersect: -16726465665.936447
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | chi2: 1.8386356065770864
[2025-06-05 00:36:11] 2025-06-04 21:56:02,706 | INFO     | current chi2=1.8386356065770864 (change=-0.06870573945055827 %)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,707 | INFO     | right removable region: 207
[2025-06-05 00:36:11] 2025-06-04 21:56:02,707 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,709 | INFO     | sum of deviations: -29000205200.000004
[2025-06-05 00:36:11] 2025-06-04 21:56:02,709 | INFO     | mean x: 1749067558.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,709 | INFO     | mean y: 2498497.234741784
[2025-06-05 00:36:11] 2025-06-04 21:56:02,709 | INFO     | -- intersect: 16930278012.59453
[2025-06-05 00:36:11] 2025-06-04 21:56:02,709 | INFO     | intersect: 16930278012.59453
[2025-06-05 00:36:11] 2025-06-04 21:56:02,710 | INFO     | chi2: 0.8350324058304761
[2025-06-05 00:36:11] 2025-06-04 21:56:02,710 | INFO     | current chi2=0.8350324058304761 (change=67.93096821363487 %)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,710 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,712 | INFO     | sum of deviations: -31272853103.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,712 | INFO     | mean x: 1749067710.5
[2025-06-05 00:36:11] 2025-06-04 21:56:02,712 | INFO     | mean y: 2500147.528846154
[2025-06-05 00:36:11] 2025-06-04 21:56:02,712 | INFO     | -- intersect: 19605193069.741978
[2025-06-05 00:36:11] 2025-06-04 21:56:02,712 | INFO     | intersect: 19605193069.741978
[2025-06-05 00:36:11] 2025-06-04 21:56:02,713 | INFO     | chi2: 0.81400364503273
[2025-06-05 00:36:11] 2025-06-04 21:56:02,713 | INFO     | current chi2=0.81400364503273 (change=2.5183167324904057 %)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,713 | INFO     | left removable region: 20
[2025-06-05 00:36:11] 2025-06-04 21:56:02,713 | INFO     | sum of square deviations: 2027639878.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | sum of deviations: -14313856912.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | mean x: 1749067680.0
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | mean y: 2509876.4331550803
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | -- intersect: 12349823012.54016
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | intersect: 12349823012.54016
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | chi2: 0.022501647653818818
[2025-06-05 00:36:11] 2025-06-04 21:56:02,715 | INFO     | -- intersect: 12349823012.54016
[2025-06-05 00:36:11] 2025-06-04 21:56:02,716 | INFO     | current memory leak: -7.06 B/s (using 187 data points, chi2=0.02)
[2025-06-05 00:36:11] 2025-06-04 21:56:02,716 | INFO     | ..............................
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . Timing measurements:
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . get job = 0 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . initial setup = 2 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . payload setup = 13 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . stage-in = 0 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . payload execution = 13298 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . stage-out = 3 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | . log creation = 1 s
[2025-06-05 00:36:11] 2025-06-04 21:56:02,717 | INFO     | ..............................
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | 
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | job summary report
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | --------------------------------------------------
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | PanDA job id: 6678155189
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | task id: 45006595
[2025-06-05 00:36:11] 2025-06-04 21:56:03,281 | INFO     | errors: (none)
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | pilot state: finished 
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | transexitcode: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | exeerrorcode: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | exeerrordiag: 
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | exitcode: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | exitmsg: OK
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | cpuconsumptiontime: 50777 s
[2025-06-05 00:36:11] 2025-06-04 21:56:03,282 | INFO     | nevents: 400
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | neventsw: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | pid: 5401
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | pgrp: 5401
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | corecount: 8
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | event service: False
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | sizes: {0: 2396514, 1: 2397199, 2: 2397398, 11: 2397604, 12: 2397632, 13316: 2427179, 13317: 2427306, 13321: 2436303, 13324: 2436359, 13410: 2436529}
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | --------------------------------------------------
[2025-06-05 00:36:11] 2025-06-04 21:56:03,283 | INFO     | 
[2025-06-05 00:36:11] 2025-06-04 21:56:03,284 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | job 6678155189 has completed (purged errors)
[2025-06-05 00:36:11] 2025-06-04 21:56:03,452 | INFO     | overall cleanup function is called
[2025-06-05 00:36:11] 2025-06-04 21:56:04,461 | INFO     | --- collectZombieJob: --- 10, [5401]
[2025-06-05 00:36:11] 2025-06-04 21:56:04,461 | INFO     | zombie collector waiting for pid 5401
[2025-06-05 00:36:11] 2025-06-04 21:56:04,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:36:11] 2025-06-04 21:56:04,461 | INFO     | collected zombie processes
[2025-06-05 00:36:11] 2025-06-04 21:56:04,461 | INFO     | will attempt to kill all subprocesses of pid=5401
[2025-06-05 00:36:11] 2025-06-04 21:56:04,578 | INFO     | process IDs to be killed: [5401] (in reverse order)
[2025-06-05 00:36:11] 2025-06-04 21:56:05,580 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:36:11] 2025-06-04 21:56:05,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:36:11] 2025-06-04 21:56:05,584 | INFO     | did not find any defunct processes belonging to 5401
[2025-06-05 00:36:11] 2025-06-04 21:56:05,593 | INFO     | did not find any defunct processes belonging to 5401
[2025-06-05 00:36:11] 2025-06-04 21:56:05,594 | INFO     | ready for new job
[2025-06-05 00:36:11] 2025-06-04 21:56:05,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:36:11] 2025-06-04 21:56:05,595 | INFO     | **************************************
[2025-06-05 00:36:11] 2025-06-04 21:56:05,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:36:11] 2025-06-04 21:56:05,596 | INFO     | **************************************
[2025-06-05 00:36:11] 2025-06-04 21:56:05,596 | INFO     | 
[2025-06-05 00:36:11] 2025-06-04 21:56:05,596 | INFO     | pilot is running in a VM
[2025-06-05 00:36:11] 2025-06-04 21:56:05,596 | INFO     | architecture information:
[2025-06-05 00:36:11] 2025-06-04 21:56:05,608 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:36:11] 2025-06-04 21:56:05,784 | INFO     | cat /etc/os-release:
[2025-06-05 00:36:11] NAME="CentOS Linux"
[2025-06-05 00:36:11] VERSION="7 (Core)"
[2025-06-05 00:36:11] ID="centos"
[2025-06-05 00:36:11] ID_LIKE="rhel fedora"
[2025-06-05 00:36:11] VERSION_ID="7"
[2025-06-05 00:36:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:36:11] ANSI_COLOR="0;31"
[2025-06-05 00:36:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:36:11] HOME_URL="https://www.centos.org/"
[2025-06-05 00:36:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:36:11] 
[2025-06-05 00:36:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:36:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:36:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:36:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:36:11] 
[2025-06-05 00:36:11] 2025-06-04 21:56:05,784 | INFO     | **************************************
[2025-06-05 00:36:11] 2025-06-04 21:56:06,288 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 00:36:11] 2025-06-04 21:56:06,445 | INFO     | sufficient remaining disk space (497036558336 B)
[2025-06-05 00:36:11] 2025-06-04 21:56:06,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:36:11] 2025-06-04 21:56:06,446 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:36:11] 2025-06-04 21:56:06,446 | INFO     | update_server=False
[2025-06-05 00:36:11] 2025-06-04 21:56:06,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:36:11] 2025-06-04 21:56:07,098 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:36:11] 2025-06-04 21:56:07,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:36:11] 2025-06-04 21:56:07,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:36:11] 2025-06-04 21:56:07,200 | INFO     | all data control threads have been joined
[2025-06-05 00:36:11] 2025-06-04 21:56:07,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:36:11] 2025-06-04 21:56:07,317 | INFO     | all payload control threads have been joined
[2025-06-05 00:36:11] 2025-06-04 21:56:07,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:36:11] 2025-06-04 21:56:07,354 | INFO     | aborting loop
[2025-06-05 00:36:11] 2025-06-04 21:56:07,421 | INFO     | all job control threads have been joined
[2025-06-05 00:36:11] 2025-06-04 21:56:07,451 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:07,747 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:07,765 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:07,862 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:07,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:36:11] 2025-06-04 21:56:07,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:36:11] 2025-06-04 21:56:08,079 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,206 | INFO     | [data] control thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,323 | INFO     | [payload] control thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,360 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,427 | INFO     | [job] control thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,433 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,442 | INFO     | [job] validate thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,663 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:08,890 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:09,243 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:11,957 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:36:11] 2025-06-04 21:56:13,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124538652480)>', '<ExcThread(monitor, started 140123928762112)>']
[2025-06-05 00:36:11] 2025-06-04 21:56:14,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:36:11] 2025-06-04 21:56:14,140 | INFO     | [monitor] control thread has ended
[2025-06-05 00:36:11] 2025-06-04 21:56:18,242 | INFO     | all workflow threads have been joined
[2025-06-05 00:36:11] 2025-06-04 21:56:18,242 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:36:11] 2025-06-04 21:56:18,242 | INFO     | traces error code: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:18,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:36:11] 2025-06-04 21:56:18,550 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:36:11] 2025-06-04 21:56:18,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:36:11] 2025-06-04 21:56:18,613 [wrapper] pilotpid: 29272
[2025-06-05 00:36:11] 2025-06-04 21:56:18,674 [wrapper] Pilot exit status: 0
[2025-06-05 00:36:11] 2025-06-04 21:56:19,155 [wrapper] pandaids: 6678155189
[2025-06-05 00:36:11] 2025-06-04 21:56:19,698 [wrapper] cleanup supervisor_pilot 26434 29273
[2025-06-05 00:36:11] 2025-06-04 21:56:19,732 [wrapper] Test setup, not cleaning
[2025-06-05 00:36:11] 2025-06-04 21:56:19,767 [wrapper] apfmon messages muted
[2025-06-05 00:36:11] 2025-06-04 21:56:19,775 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:36:11] 2025-06-04 21:56:19,778 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:36:11]  *** Error codes and diagnostics ***
[2025-06-05 00:36:11]     "exeErrorCode": 0,
[2025-06-05 00:36:11]     "exeErrorDiag": "",
[2025-06-05 00:36:11]     "pilotErrorCode": 0,
[2025-06-05 00:36:11]     "pilotErrorDiag": "",
[2025-06-05 00:36:11]  *** Listing of results directory ***
[2025-06-05 00:36:11] total 392764
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-05 00:36:11] -rwx------. 1 boinc boinc     37140 Jun  4 01:13 runpilot2-wrapper.sh
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:13 queuedata.json
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:36:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:11 run_atlas
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:11 job.xml
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc 215269445 Jun  4 20:11 EVNT.45006593._001921.pool.root.1
[2025-06-05 00:36:11] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:11 shared
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc    508881 Jun  4 20:11 input.tar.gz
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc      6390 Jun  4 20:11 init_data.xml
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:11 start_atlas.sh
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:11 boinc_lockfile
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:11 pandaJob.out
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc    990984 Jun  4 20:12 agis_schedconf.cvmfs.json
[2025-06-05 00:36:11] drwx------. 4 boinc boinc      4096 Jun  4 20:12 pilot3
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc 179984508 Jun  4 23:53 HITS.45006595._047857.pool.root.1
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc       531 Jun  4 23:53 boinc_task_state.xml
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc      1017 Jun  4 23:54 memory_monitor_summary.json
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc   1598969 Jun  4 23:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc    394218 Jun  4 23:54 log.45006595._047857.job.log.tgz.1
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc        95 Jun  4 23:55 pilot_heartbeat.json
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc      7688 Jun  4 23:56 heartbeat.json
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc      4416 Jun  4 23:56 pilotlog.txt
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc   1159221 Jun  4 23:56 log.45006595._047857.job.log.1
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc       357 Jun  4 23:56 output.list
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:56 runtime_log
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc   1576960 Jun  4 23:56 result.tar.gz
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc      8659 Jun  4 23:56 runtime_log.err
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc       657 Jun  4 23:56 Lw1NDmW0pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAEaKDm2jy5Nn.diag
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:36 boinc_mmap_file
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:36 wrapper_checkpoint.txt
[2025-06-05 00:36:11] -rw-r--r--. 1 boinc boinc     20508 Jun  5 00:36 stderr.txt
[2025-06-05 00:36:11] HITS file was successfully produced:
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc 179984508 Jun  4 23:53 shared/HITS.pool.root.1
[2025-06-05 00:36:11]  *** Contents of shared directory: ***
[2025-06-05 00:36:11] total 388052
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc 215269445 Jun  4 20:11 ATLAS.root_0
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc    508881 Jun  4 20:11 input.tar.gz
[2025-06-05 00:36:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:11 start_atlas.sh
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc 179984508 Jun  4 23:53 HITS.pool.root.1
[2025-06-05 00:36:11] -rw-------. 1 boinc boinc   1576960 Jun  4 23:56 result.tar.gz
00:36:13 (25358): run_atlas exited; CPU time 50949.892315
00:36:13 (25358): called boinc_finish(0)

</stderr_txt>
]]>

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