Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:33:09 (912392): wrapper (7.7.26015): starting
13:33:09 (912392): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 13:33:09] Arguments: --nthreads 12
[2025-06-05 13:33:09] Threads: 12
[2025-06-05 13:33:09] Checking for CVMFS
[2025-06-05 13:33:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:33:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:33:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:33:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:33:12] 2.12.7.0 19605 3175 54680 146820 3 56 3200415 4096001 912 130560 0 2301492 99.989 787665 183 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 13:33:12] CVMFS is ok
[2025-06-05 13:33:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:33:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 13:33:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 13:33:12] Further information can be found at the LHC@home message board.
[2025-06-05 13:33:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:33:12] Checking for apptainer binary...
[2025-06-05 13:33:12] apptainer is not installed, using version from CVMFS
[2025-06-05 13:33:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:33:13] g630
[2025-06-05 13:33:13] apptainer works
[2025-06-05 13:33:13] Set ATHENA_PROC_NUMBER=12
[2025-06-05 13:33:13] Set ATHENA_CORE_NUMBER=12
[2025-06-05 13:33:13] Starting ATLAS job with PandaID=6678155187
[2025-06-05 13:33:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:23:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:23:46] 2025-06-05 18:23:22,915 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:23:46] 2025-06-05 18:23:22,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:23:46] 2025-06-05 18:23:22,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:23:46] 2025-06-05 18:23:22,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:23:46] 2025-06-05 18:23:22,918 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:23:46] 2025-06-05 18:23:22,919 | INFO     | sum of square deviations: 6880192209.302519
[2025-06-05 18:23:46] 2025-06-05 18:23:22,920 | INFO     | sum of deviations: 8576557655.498207
[2025-06-05 18:23:46] 2025-06-05 18:23:22,920 | INFO     | mean x: 1749139170.049822
[2025-06-05 18:23:46] 2025-06-05 18:23:22,920 | INFO     | mean y: 2642936.964412811
[2025-06-05 18:23:46] 2025-06-05 18:23:22,920 | INFO     | -- intersect: -2177760238.275276
[2025-06-05 18:23:46] 2025-06-05 18:23:22,920 | INFO     | intersect: -2177760238.275276
[2025-06-05 18:23:46] 2025-06-05 18:23:22,921 | INFO     | chi2: 4.623450706909587
[2025-06-05 18:23:46] 2025-06-05 18:23:22,921 | INFO     | sum of square deviations: 6519426924.289814
[2025-06-05 18:23:46] 2025-06-05 18:23:22,922 | INFO     | sum of deviations: 47476619122.797104
[2025-06-05 18:23:46] 2025-06-05 18:23:22,922 | INFO     | mean x: 1749139017.5507247
[2025-06-05 18:23:46] 2025-06-05 18:23:22,922 | INFO     | mean y: 2659203.5144927534
[2025-06-05 18:23:46] 2025-06-05 18:23:22,922 | INFO     | -- intersect: -12735148566.012043
[2025-06-05 18:23:46] 2025-06-05 18:23:22,923 | INFO     | intersect: -12735148566.012043
[2025-06-05 18:23:46] 2025-06-05 18:23:22,923 | INFO     | chi2: 3.136927737170411
[2025-06-05 18:23:46] 2025-06-05 18:23:22,923 | INFO     | current chi2=3.136927737170411 (change=32.15180746963775 %)
[2025-06-05 18:23:46] 2025-06-05 18:23:22,923 | INFO     | sum of square deviations: 6171499089.276748
[2025-06-05 18:23:46] 2025-06-05 18:23:22,924 | INFO     | sum of deviations: 46652181854.295204
[2025-06-05 18:23:46] 2025-06-05 18:23:22,924 | INFO     | mean x: 1749138865.0516605
[2025-06-05 18:23:46] 2025-06-05 18:23:22,924 | INFO     | mean y: 2658842.121771218
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | -- intersect: -13219597734.500135
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | intersect: -13219597734.500135
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | chi2: 3.139032866823901
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | current chi2=3.139032866823901 (change=-0.06710800598131879 %)
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | right removable region: 270
[2025-06-05 18:23:46] 2025-06-05 18:23:22,925 | INFO     | sum of square deviations: 6519418384.289813
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | sum of deviations: -66786738949.34781
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | mean x: 1749139322.5507247
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | mean y: 2674677.7391304346
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | -- intersect: 17921345398.848244
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | intersect: 17921345398.848244
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | chi2: 1.9966970238081048
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | current chi2=1.9966970238081048 (change=56.81370581448807 %)
[2025-06-05 18:23:46] 2025-06-05 18:23:22,927 | INFO     | sum of square deviations: 6171482009.276748
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | sum of deviations: -81344571796.62727
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | mean x: 1749139475.0516605
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | mean y: 2681032.6162361624
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | -- intersect: 23057597403.883316
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | intersect: 23057597403.883316
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | chi2: 1.8660816480832465
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | current chi2=1.8660816480832465 (change=6.541572114719155 %)
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | left removable region: 20
[2025-06-05 18:23:46] 2025-06-05 18:23:22,929 | INFO     | sum of square deviations: 4845104505.715983
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | sum of deviations: -33249089801.400036
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | mean x: 1749139444.556
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | mean y: 2694977.6
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | -- intersect: 12006005617.979935
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | intersect: 12006005617.979935
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | chi2: 0.2625852116148765
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | -- intersect: 12006005617.979935
[2025-06-05 18:23:46] 2025-06-05 18:23:22,931 | INFO     | current memory leak: -6.86 B/s (using 250 data points, chi2=0.26)
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | ..............................
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . Timing measurements:
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . get job = 0 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . initial setup = 5 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . payload setup = 70 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . stage-in = 0 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . payload execution = 17126 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . stage-out = 4 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | . log creation = 1 s
[2025-06-05 18:23:46] 2025-06-05 18:23:22,932 | INFO     | ..............................
[2025-06-05 18:23:46] 2025-06-05 18:23:23,020 | INFO     | 
[2025-06-05 18:23:46] 2025-06-05 18:23:23,020 | INFO     | job summary report
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | --------------------------------------------------
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | PanDA job id: 6678155187
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | task id: 45006595
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | errors: (none)
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | pilot state: finished 
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | transexitcode: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | exeerrorcode: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | exeerrordiag: 
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | exitcode: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | exitmsg: OK
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | cpuconsumptiontime: 30673 s
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | nevents: 400
[2025-06-05 18:23:46] 2025-06-05 18:23:23,021 | INFO     | neventsw: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | pid: 922401
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | pgrp: 922401
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | corecount: 12
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | event service: False
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | sizes: {0: 2397194, 1: 2397393, 12: 2397393, 23: 2397421, 33: 2397449, 35: 2397711, 44: 2397867, 17201: 2429290, 17206: 2438333, 17268: 2438447}
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | --------------------------------------------------
[2025-06-05 18:23:46] 2025-06-05 18:23:23,022 | INFO     | 
[2025-06-05 18:23:46] 2025-06-05 18:23:23,026 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-05 18:23:46] 2025-06-05 18:23:23,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:23:46] 2025-06-05 18:23:23,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:23:46] 2025-06-05 18:23:23,196 | INFO     | job 6678155187 has completed (purged errors)
[2025-06-05 18:23:46] 2025-06-05 18:23:23,196 | INFO     | overall cleanup function is called
[2025-06-05 18:23:46] 2025-06-05 18:23:24,202 | INFO     | --- collectZombieJob: --- 10, [922401]
[2025-06-05 18:23:46] 2025-06-05 18:23:24,202 | INFO     | zombie collector waiting for pid 922401
[2025-06-05 18:23:46] 2025-06-05 18:23:24,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:23:46] 2025-06-05 18:23:24,202 | INFO     | collected zombie processes
[2025-06-05 18:23:46] 2025-06-05 18:23:24,202 | INFO     | will attempt to kill all subprocesses of pid=922401
[2025-06-05 18:23:46] 2025-06-05 18:23:24,428 | INFO     | process IDs to be killed: [922401] (in reverse order)
[2025-06-05 18:23:46] 2025-06-05 18:23:25,831 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:23:46] 2025-06-05 18:23:25,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:23:46] 2025-06-05 18:23:25,833 | INFO     | did not find any defunct processes belonging to 922401
[2025-06-05 18:23:46] 2025-06-05 18:23:25,834 | INFO     | did not find any defunct processes belonging to 922401
[2025-06-05 18:23:46] 2025-06-05 18:23:25,834 | INFO     | ready for new job
[2025-06-05 18:23:46] 2025-06-05 18:23:25,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:23:46] 2025-06-05 18:23:25,859 | INFO     | **************************************
[2025-06-05 18:23:46] 2025-06-05 18:23:25,859 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:23:46] 2025-06-05 18:23:25,859 | INFO     | **************************************
[2025-06-05 18:23:46] 2025-06-05 18:23:25,859 | INFO     | 
[2025-06-05 18:23:46] 2025-06-05 18:23:25,878 | INFO     | architecture information:
[2025-06-05 18:23:46] 2025-06-05 18:23:25,934 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:23:46] 2025-06-05 18:23:25,954 | INFO     | cat /etc/os-release:
[2025-06-05 18:23:46] NAME="CentOS Linux"
[2025-06-05 18:23:46] VERSION="7 (Core)"
[2025-06-05 18:23:46] ID="centos"
[2025-06-05 18:23:46] ID_LIKE="rhel fedora"
[2025-06-05 18:23:46] VERSION_ID="7"
[2025-06-05 18:23:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:23:46] ANSI_COLOR="0;31"
[2025-06-05 18:23:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:23:46] HOME_URL="https://www.centos.org/"
[2025-06-05 18:23:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:23:46] 
[2025-06-05 18:23:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:23:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:23:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:23:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:23:46] 
[2025-06-05 18:23:46] 2025-06-05 18:23:25,954 | INFO     | **************************************
[2025-06-05 18:23:46] 2025-06-05 18:23:26,458 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-05 18:23:46] 2025-06-05 18:23:26,722 | INFO     | sufficient remaining disk space (181117386752 B)
[2025-06-05 18:23:46] 2025-06-05 18:23:26,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:23:46] 2025-06-05 18:23:26,723 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:23:46] 2025-06-05 18:23:26,723 | INFO     | update_server=False
[2025-06-05 18:23:46] 2025-06-05 18:23:26,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:23:46] 2025-06-05 18:23:26,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:23:46] 2025-06-05 18:23:26,726 | INFO     | aborting loop
[2025-06-05 18:23:46] 2025-06-05 18:23:26,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:23:46] 2025-06-05 18:23:26,974 | INFO     | all payload control threads have been joined
[2025-06-05 18:23:46] 2025-06-05 18:23:27,178 | INFO     | all data control threads have been joined
[2025-06-05 18:23:46] 2025-06-05 18:23:27,734 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,738 | INFO     | PID=915980 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 18:23:46] 2025-06-05 18:23:27,738 | INFO     | .. there are 2 such processes running
[2025-06-05 18:23:46] 2025-06-05 18:23:27,762 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:23:46] 2025-06-05 18:23:27,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:23:46] 2025-06-05 18:23:27,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:23:46] 2025-06-05 18:23:27,758 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,858 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,862 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,890 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,918 | INFO     | [job] validate thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,978 | INFO     | [payload] control thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:27,994 | INFO     | all job control threads have been joined
[2025-06-05 18:23:46] 2025-06-05 18:23:28,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:23:46] 2025-06-05 18:23:28,186 | INFO     | [data] control thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:28,358 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:28,738 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:28,982 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:28,998 | INFO     | [job] control thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:29,050 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:29,222 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:30,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:23:46] 2025-06-05 18:23:34,218 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:36,810 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:23:46] 2025-06-05 18:23:37,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:23:46] 2025-06-05 18:23:39,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755718137664)>', '<ExcThread(monitor, started 139755132016384)>']
[2025-06-05 18:23:46] 2025-06-05 18:23:39,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:23:46] 2025-06-05 18:23:39,830 | INFO     | [monitor] control thread has ended
[2025-06-05 18:23:46] 2025-06-05 18:23:44,782 | INFO     | all workflow threads have been joined
[2025-06-05 18:23:46] 2025-06-05 18:23:44,782 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:23:46] 2025-06-05 18:23:44,782 | INFO     | traces error code: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:44,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:23:46] 2025-06-05 18:23:45,147 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:23:46] 2025-06-05 18:23:45,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:23:46] 2025-06-05 18:23:45,203 [wrapper] pilotpid: 915980
[2025-06-05 18:23:46] 2025-06-05 18:23:45,219 [wrapper] Pilot exit status: 0
[2025-06-05 18:23:46] 2025-06-05 18:23:45,390 [wrapper] pandaids: 6678155187
[2025-06-05 18:23:46] 2025-06-05 18:23:45,455 [wrapper] cleanup supervisor_pilot  989925 915981
[2025-06-05 18:23:46] 2025-06-05 18:23:45,486 [wrapper] Test setup, not cleaning
[2025-06-05 18:23:46] 2025-06-05 18:23:45,574 [wrapper] apfmon messages muted
[2025-06-05 18:23:46] 2025-06-05 18:23:45,599 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:23:46] 2025-06-05 18:23:45,623 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:23:46]  *** Error codes and diagnostics ***
[2025-06-05 18:23:46]     "exeErrorCode": 0,
[2025-06-05 18:23:46]     "exeErrorDiag": "",
[2025-06-05 18:23:46]     "pilotErrorCode": 0,
[2025-06-05 18:23:46]     "pilotErrorDiag": "",
[2025-06-05 18:23:46]  *** Listing of results directory ***
[2025-06-05 18:23:46] total 389124
[2025-06-05 18:23:46] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:42 pilot3.tar.gz
[2025-06-05 18:23:46] -rwx------ 1 boinc boinc     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-05 18:23:46] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:13 queuedata.json
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc       100 Jun  5 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:23:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:33 run_atlas
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc       105 Jun  5 13:33 job.xml
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:33 start_atlas.sh
[2025-06-05 18:23:46] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:33 shared
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc    508880 Jun  5 13:33 input.tar.gz
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc      9280 Jun  5 13:33 init_data.xml
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc 215269445 Jun  5 13:33 EVNT.45006593._001921.pool.root.1
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc         0 Jun  5 13:33 boinc_lockfile
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 13:33 pandaJob.out
[2025-06-05 18:23:46] -rw------- 1 boinc boinc    983210 Jun  5 13:34 agis_schedconf.cvmfs.json
[2025-06-05 18:23:46] drwx------ 4 boinc boinc      4096 Jun  5 13:34 pilot3
[2025-06-05 18:23:46] -rw------- 1 boinc boinc 175186096 Jun  5 18:20 HITS.45006595._047855.pool.root.1
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc       530 Jun  5 18:20 boinc_task_state.xml
[2025-06-05 18:23:46] -rw------- 1 boinc boinc      1021 Jun  5 18:22 memory_monitor_summary.json
[2025-06-05 18:23:46] -rw------- 1 boinc boinc   1598969 Jun  5 18:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:23:46] -rw------- 1 boinc boinc    487902 Jun  5 18:22 log.45006595._047855.job.log.tgz.1
[2025-06-05 18:23:46] -rw------- 1 boinc boinc        95 Jun  5 18:23 pilot_heartbeat.json
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 18:23 boinc_mmap_file
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc        28 Jun  5 18:23 wrapper_checkpoint.txt
[2025-06-05 18:23:46] -rw------- 1 boinc boinc      7663 Jun  5 18:23 heartbeat.json
[2025-06-05 18:23:46] -rw------- 1 boinc boinc      4842 Jun  5 18:23 pilotlog.txt
[2025-06-05 18:23:46] -rw------- 1 boinc boinc   1594559 Jun  5 18:23 log.45006595._047855.job.log.1
[2025-06-05 18:23:46] -rw------- 1 boinc boinc       357 Jun  5 18:23 output.list
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc       620 Jun  5 18:23 runtime_log
[2025-06-05 18:23:46] -rw------- 1 boinc boinc   2099200 Jun  5 18:23 result.tar.gz
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc      8944 Jun  5 18:23 runtime_log.err
[2025-06-05 18:23:46] -rw------- 1 boinc boinc       652 Jun  5 18:23 HMzNDmW0pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8DaKDmDXRzum.diag
[2025-06-05 18:23:46] -rw-rw-r-- 1 boinc boinc     21094 Jun  5 18:23 stderr.txt
[2025-06-05 18:23:46] HITS file was successfully produced:
[2025-06-05 18:23:46] -rw------- 1 boinc boinc 175186096 Jun  5 18:20 shared/HITS.pool.root.1
[2025-06-05 18:23:46]  *** Contents of shared directory: ***
[2025-06-05 18:23:46] total 383888
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:33 start_atlas.sh
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc    508880 Jun  5 13:33 input.tar.gz
[2025-06-05 18:23:46] -rw-r--r-- 2 boinc boinc 215269445 Jun  5 13:33 ATLAS.root_0
[2025-06-05 18:23:46] -rw------- 1 boinc boinc 175186096 Jun  5 18:20 HITS.pool.root.1
[2025-06-05 18:23:46] -rw------- 1 boinc boinc   2099200 Jun  5 18:23 result.tar.gz
18:23:48 (912392): run_atlas exited; CPU time 30761.806804
18:23:48 (912392): called boinc_finish(0)

</stderr_txt>
]]>

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