Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:50:41 (6184): wrapper (7.7.26015): starting
13:50:41 (6184): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:50:41] Arguments: --nthreads 8
[2025-06-04 13:50:41] Threads: 8
[2025-06-04 13:50:41] Checking for CVMFS
[2025-06-04 13:50:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:50:43] 2.11.2.0 15360 33164 100740 146779 0 103 13275782 25165825 2745 130560 0 17240012 99.780 19056042 2134 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 13:50:43] CVMFS is ok
[2025-06-04 13:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:50:43] Checking for apptainer binary...
[2025-06-04 13:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:50:43] Running /usr/bin/apptainer --version
[2025-06-04 13:50:43] apptainer version 1.3.2-1.el7
[2025-06-04 13:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:52:16] cg-vwn250.simple-grid.lan
[2025-06-04 13:52:16] apptainer works
[2025-06-04 13:52:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:52:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:52:16] Starting ATLAS job with PandaID=6667098699
[2025-06-04 13:52:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:01:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:01:57] 2025-06-04 17:33:31,568 | INFO     | extracted standard info from prmon json
[2025-06-04 20:01:57] 2025-06-04 17:33:31,569 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:01:57] 2025-06-04 17:33:31,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:01:57] 2025-06-04 17:33:31,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:01:57] 2025-06-04 17:33:31,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:01:57] 2025-06-04 17:33:31,577 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:01:57] 2025-06-04 17:33:31,578 | INFO     | sum of square deviations: 10546523325.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,581 | INFO     | sum of deviations: 145313113407.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,582 | INFO     | mean x: 1749048428.5
[2025-06-04 20:01:57] 2025-06-04 17:33:31,582 | INFO     | mean y: 2459264.9135802467
[2025-06-04 20:01:57] 2025-06-04 17:33:31,582 | INFO     | -- intersect: -24096446584.228477
[2025-06-04 20:01:57] 2025-06-04 17:33:31,582 | INFO     | intersect: -24096446584.228477
[2025-06-04 20:01:57] 2025-06-04 17:33:31,583 | INFO     | chi2: 6.315425593618701
[2025-06-04 20:01:57] 2025-06-04 17:33:31,583 | INFO     | sum of square deviations: 10065751520.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,587 | INFO     | sum of deviations: 164267254837.00003
[2025-06-04 20:01:57] 2025-06-04 17:33:31,587 | INFO     | mean x: 1749048276.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,587 | INFO     | mean y: 2465191.3072100314
[2025-06-04 20:01:57] 2025-06-04 17:33:31,587 | INFO     | -- intersect: -28540993119.285736
[2025-06-04 20:01:57] 2025-06-04 17:33:31,587 | INFO     | intersect: -28540993119.285736
[2025-06-04 20:01:57] 2025-06-04 17:33:31,588 | INFO     | chi2: 5.578701664875989
[2025-06-04 20:01:57] 2025-06-04 17:33:31,588 | INFO     | current chi2=5.578701664875989 (change=11.665467636688188 %)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,588 | INFO     | right removable region: 318
[2025-06-04 20:01:57] 2025-06-04 17:33:31,589 | INFO     | sum of square deviations: 10065751520.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,592 | INFO     | sum of deviations: 33224545358.00001
[2025-06-04 20:01:57] 2025-06-04 17:33:31,593 | INFO     | mean x: 1749048581.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,593 | INFO     | mean y: 2494794.0564263323
[2025-06-04 20:01:57] 2025-06-04 17:33:31,593 | INFO     | -- intersect: -5770680094.804735
[2025-06-04 20:01:57] 2025-06-04 17:33:31,593 | INFO     | intersect: -5770680094.804735
[2025-06-04 20:01:57] 2025-06-04 17:33:31,594 | INFO     | chi2: 1.7507746534906539
[2025-06-04 20:01:57] 2025-06-04 17:33:31,594 | INFO     | current chi2=1.7507746534906539 (change=72.27780412360981 %)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,594 | INFO     | sum of square deviations: 9599817202.5
[2025-06-04 20:01:57] 2025-06-04 17:33:31,598 | INFO     | sum of deviations: -10047094334.500004
[2025-06-04 20:01:57] 2025-06-04 17:33:31,598 | INFO     | mean x: 1749048733.5
[2025-06-04 20:01:57] 2025-06-04 17:33:31,598 | INFO     | mean y: 2508874.187898089
[2025-06-04 20:01:57] 2025-06-04 17:33:31,599 | INFO     | -- intersect: 1833049732.4592314
[2025-06-04 20:01:57] 2025-06-04 17:33:31,599 | INFO     | intersect: 1833049732.4592314
[2025-06-04 20:01:57] 2025-06-04 17:33:31,600 | INFO     | chi2: 0.8041225790671507
[2025-06-04 20:01:57] 2025-06-04 17:33:31,600 | INFO     | current chi2=0.8041225790671507 (change=54.07046946539295 %)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,600 | INFO     | sum of square deviations: 9148487810.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,604 | INFO     | sum of deviations: -8823173407.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,604 | INFO     | mean x: 1749048886.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,604 | INFO     | mean y: 2508465.5275080907
[2025-06-04 20:01:57] 2025-06-04 17:33:31,604 | INFO     | -- intersect: 1689362286.5086799
[2025-06-04 20:01:57] 2025-06-04 17:33:31,604 | INFO     | intersect: 1689362286.5086799
[2025-06-04 20:01:57] 2025-06-04 17:33:31,605 | INFO     | chi2: 0.7883413719602991
[2025-06-04 20:01:57] 2025-06-04 17:33:31,605 | INFO     | current chi2=0.7883413719602991 (change=1.9625374933706152 %)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,605 | INFO     | left removable region: 30
[2025-06-04 20:01:57] 2025-06-04 17:33:31,606 | INFO     | sum of square deviations: 7407141672.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,609 | INFO     | sum of deviations: 7016288076.0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,609 | INFO     | mean x: 1749049160.5
[2025-06-04 20:01:57] 2025-06-04 17:33:31,609 | INFO     | mean y: 2517110.201388889
[2025-06-04 20:01:57] 2025-06-04 17:33:31,609 | INFO     | -- intersect: -1654239748.5938401
[2025-06-04 20:01:57] 2025-06-04 17:33:31,609 | INFO     | intersect: -1654239748.5938401
[2025-06-04 20:01:57] 2025-06-04 17:33:31,610 | INFO     | chi2: 0.00029532255746122154
[2025-06-04 20:01:57] 2025-06-04 17:33:31,610 | INFO     | -- intersect: -1654239748.5938401
[2025-06-04 20:01:57] 2025-06-04 17:33:31,610 | INFO     | current memory leak: 0.95 B/s (using 288 data points, chi2=0.00)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,611 | INFO     | ..............................
[2025-06-04 20:01:57] 2025-06-04 17:33:31,611 | INFO     | . Timing measurements:
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . get job = 0 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . initial setup = 9 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . payload setup = 126 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . stage-in = 0 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . payload execution = 19882 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . stage-out = 4 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | . log creation = 1 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,612 | INFO     | ..............................
[2025-06-04 20:01:57] 2025-06-04 17:33:31,806 | INFO     | 
[2025-06-04 20:01:57] 2025-06-04 17:33:31,806 | INFO     | job summary report
[2025-06-04 20:01:57] 2025-06-04 17:33:31,806 | INFO     | --------------------------------------------------
[2025-06-04 20:01:57] 2025-06-04 17:33:31,806 | INFO     | PanDA job id: 6667098699
[2025-06-04 20:01:57] 2025-06-04 17:33:31,806 | INFO     | task id: 44871837
[2025-06-04 20:01:57] 2025-06-04 17:33:31,807 | INFO     | errors: (none)
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | pilot state: finished 
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | transexitcode: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | exeerrorcode: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | exeerrordiag: 
[2025-06-04 20:01:57] 2025-06-04 17:33:31,810 | INFO     | exitcode: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | exitmsg: OK
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | cpuconsumptiontime: 74178 s
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | nevents: 400
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | neventsw: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | pid: 26552
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | pgrp: 26552
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | corecount: 8
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | event service: False
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | sizes: {0: 2396563, 1: 2397249, 2: 2397448, 13: 2397448, 23: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 88: 2397828, 93: 2398342, 98
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | --------------------------------------------------
[2025-06-04 20:01:57] 2025-06-04 17:33:31,811 | INFO     | 
[2025-06-04 20:01:57] 2025-06-04 17:33:31,812 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 20:01:57] 2025-06-04 17:33:32,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:01:57] 2025-06-04 17:33:32,307 | INFO     | job 6667098699 has completed (purged errors)
[2025-06-04 20:01:57] 2025-06-04 17:33:32,310 | INFO     | overall cleanup function is called
[2025-06-04 20:01:57] 2025-06-04 17:33:33,318 | INFO     | --- collectZombieJob: --- 10, [26552]
[2025-06-04 20:01:57] 2025-06-04 17:33:33,318 | INFO     | zombie collector waiting for pid 26552
[2025-06-04 20:01:57] 2025-06-04 17:33:33,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:01:57] 2025-06-04 17:33:33,318 | INFO     | collected zombie processes
[2025-06-04 20:01:57] 2025-06-04 17:33:33,319 | INFO     | will attempt to kill all subprocesses of pid=26552
[2025-06-04 20:01:57] 2025-06-04 17:33:33,466 | INFO     | process IDs to be killed: [26552] (in reverse order)
[2025-06-04 20:01:57] 2025-06-04 17:33:34,153 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:01:57] 2025-06-04 17:33:34,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:01:57] 2025-06-04 17:33:34,158 | INFO     | did not find any defunct processes belonging to 26552
[2025-06-04 20:01:57] 2025-06-04 17:33:34,161 | INFO     | did not find any defunct processes belonging to 26552
[2025-06-04 20:01:57] 2025-06-04 17:33:34,162 | INFO     | ready for new job
[2025-06-04 20:01:57] 2025-06-04 17:33:34,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:01:57] 2025-06-04 17:33:34,164 | INFO     | **************************************
[2025-06-04 20:01:57] 2025-06-04 17:33:34,164 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:01:57] 2025-06-04 17:33:34,165 | INFO     | **************************************
[2025-06-04 20:01:57] 2025-06-04 17:33:34,165 | INFO     | 
[2025-06-04 20:01:57] 2025-06-04 17:33:34,165 | INFO     | pilot is running in a VM
[2025-06-04 20:01:57] 2025-06-04 17:33:34,165 | INFO     | architecture information:
[2025-06-04 20:01:57] 2025-06-04 17:33:34,178 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:01:57] 2025-06-04 17:33:34,465 | INFO     | cat /etc/os-release:
[2025-06-04 20:01:57] NAME="CentOS Linux"
[2025-06-04 20:01:57] VERSION="7 (Core)"
[2025-06-04 20:01:57] ID="centos"
[2025-06-04 20:01:57] ID_LIKE="rhel fedora"
[2025-06-04 20:01:57] VERSION_ID="7"
[2025-06-04 20:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:01:57] ANSI_COLOR="0;31"
[2025-06-04 20:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:01:57] HOME_URL="https://www.centos.org/"
[2025-06-04 20:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:01:57] 
[2025-06-04 20:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:01:57] 
[2025-06-04 20:01:57] 2025-06-04 17:33:34,466 | INFO     | **************************************
[2025-06-04 20:01:57] 2025-06-04 17:33:34,969 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 20:01:57] 2025-06-04 17:33:35,271 | INFO     | sufficient remaining disk space (496832086016 B)
[2025-06-04 20:01:57] 2025-06-04 17:33:35,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:01:57] 2025-06-04 17:33:35,272 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:01:57] 2025-06-04 17:33:35,272 | INFO     | update_server=False
[2025-06-04 20:01:57] 2025-06-04 17:33:35,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:01:57] 2025-06-04 17:33:35,273 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:01:57] 2025-06-04 17:33:35,273 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:01:57] 2025-06-04 17:33:35,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:01:57] 2025-06-04 17:33:35,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:01:57] 2025-06-04 17:33:35,653 | INFO     | all data control threads have been joined
[2025-06-04 20:01:57] 2025-06-04 17:33:35,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:01:57] 2025-06-04 17:33:35,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:01:57] 2025-06-04 17:33:35,849 | INFO     | aborting loop
[2025-06-04 20:01:57] 2025-06-04 17:33:36,005 | INFO     | all payload control threads have been joined
[2025-06-04 20:01:57] 2025-06-04 17:33:36,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:01:57] 2025-06-04 17:33:36,278 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:36,659 | INFO     | [data] control thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:36,717 | INFO     | all job control threads have been joined
[2025-06-04 20:01:57] 2025-06-04 17:33:36,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:01:57] 2025-06-04 17:33:36,855 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:36,983 | INFO     | [job] validate thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,011 | INFO     | [payload] control thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,016 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,171 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,446 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,466 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,523 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,693 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,722 | INFO     | [job] control thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,784 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:37,837 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:40,217 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:01:57] 2025-06-04 17:33:41,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257820407616)>', '<ExcThread(monitor, started 140257240536832)>']
[2025-06-04 20:01:57] 2025-06-04 17:33:41,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:01:57] 2025-06-04 17:33:41,309 | INFO     | [monitor] control thread has ended
[2025-06-04 20:01:57] 2025-06-04 17:33:46,306 | INFO     | all workflow threads have been joined
[2025-06-04 20:01:57] 2025-06-04 17:33:46,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:01:57] 2025-06-04 17:33:46,306 | INFO     | traces error code: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:46,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:01:57] 2025-06-04 17:33:46,762 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:01:57] 2025-06-04 17:33:46,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:01:57] 2025-06-04 17:33:46,941 [wrapper] pilotpid: 17932
[2025-06-04 20:01:57] 2025-06-04 17:33:46,993 [wrapper] Pilot exit status: 0
[2025-06-04 20:01:57] 2025-06-04 17:33:47,426 [wrapper] pandaids: 6667098699
[2025-06-04 20:01:57] 2025-06-04 17:33:48,359 [wrapper] cleanup supervisor_pilot 21889 17933
[2025-06-04 20:01:57] 2025-06-04 17:33:48,403 [wrapper] Test setup, not cleaning
[2025-06-04 20:01:57] 2025-06-04 17:33:48,511 [wrapper] apfmon messages muted
[2025-06-04 20:01:57] 2025-06-04 17:33:48,599 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:01:57] 2025-06-04 17:33:48,662 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:01:57]  *** Error codes and diagnostics ***
[2025-06-04 20:01:57]     "exeErrorCode": 0,
[2025-06-04 20:01:57]     "exeErrorDiag": "",
[2025-06-04 20:01:57]     "pilotErrorCode": 0,
[2025-06-04 20:01:57]     "pilotErrorDiag": "",
[2025-06-04 20:01:57]  *** Listing of results directory ***
[2025-06-04 20:01:57] total 423832
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc      5111 May 27 15:41 queuedata.json
[2025-06-04 20:01:57] -rwx------. 1 boinc boinc     37140 May 27 15:43 runpilot2-wrapper.sh
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc    495897 May 27 15:43 pilot3.tar.gz
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:01:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:50 run_atlas
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:50 job.xml
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc      6393 Jun  4 13:50 init_data.xml
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc 223297447 Jun  4 13:50 EVNT.44871834._002681.pool.root.1
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:50 start_atlas.sh
[2025-06-04 20:01:57] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:50 shared
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc    508877 Jun  4 13:50 input.tar.gz
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:50 boinc_lockfile
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc      2558 Jun  4 13:52 pandaJob.out
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc    986812 Jun  4 13:55 agis_schedconf.cvmfs.json
[2025-06-04 20:01:57] drwx------. 4 boinc boinc      4096 Jun  4 13:55 pilot3
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc 202526978 Jun  4 19:30 HITS.44871837._068180.pool.root.1
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:30 boinc_task_state.xml
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc      1017 Jun  4 19:31 memory_monitor_summary.json
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc   1598969 Jun  4 19:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc    443932 Jun  4 19:32 log.44871837._068180.job.log.tgz.1
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc        95 Jun  4 19:33 pilot_heartbeat.json
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc      7689 Jun  4 19:33 heartbeat.json
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc      4540 Jun  4 19:33 pilotlog.txt
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc   1735079 Jun  4 19:33 log.44871837._068180.job.log.1
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc       357 Jun  4 19:33 output.list
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:33 runtime_log
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc   2201600 Jun  4 19:33 result.tar.gz
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc      8673 Jun  4 19:33 runtime_log.err
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc       658 Jun  4 19:33 pOMLDm1l9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVYZKDmgsCwWm.diag
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc        28 Jun  4 20:01 wrapper_checkpoint.txt
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:01 boinc_mmap_file
[2025-06-04 20:01:57] -rw-r--r--. 1 boinc boinc     20526 Jun  4 20:01 stderr.txt
[2025-06-04 20:01:57] HITS file was successfully produced:
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc 202526978 Jun  4 19:30 shared/HITS.pool.root.1
[2025-06-04 20:01:57]  *** Contents of shared directory: ***
[2025-06-04 20:01:57] total 418516
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc 223297447 Jun  4 13:50 ATLAS.root_0
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:50 start_atlas.sh
[2025-06-04 20:01:57] -rw-r--r--. 2 boinc boinc    508877 Jun  4 13:50 input.tar.gz
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc 202526978 Jun  4 19:30 HITS.pool.root.1
[2025-06-04 20:01:57] -rw-------. 1 boinc boinc   2201600 Jun  4 19:33 result.tar.gz
20:01:59 (6184): run_atlas exited; CPU time 74464.795501
20:01:59 (6184): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN