Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:24:31 (1090453): wrapper (7.7.26015): starting
21:24:31 (1090453): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:24:31] Arguments: --nthreads 12
[2025-06-03 21:24:31] Threads: 12
[2025-06-03 21:24:31] Checking for CVMFS
[2025-06-03 21:24:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:24:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:24:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:24:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:24:33] 2.11.5.0 3710071 23180 384952 146768 1 600 35017780 45568001 16441 130560 0 230834112 99.823 122044724 26556 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:24:33] CVMFS is ok
[2025-06-03 21:24:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:24:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:24:33] Further information can be found at the LHC@home message board.
[2025-06-03 21:24:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:24:33] Checking for apptainer binary...
[2025-06-03 21:24:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:24:33] Running /usr/bin/apptainer --version
[2025-06-03 21:24:33] apptainer version 1.4.0-1.el9
[2025-06-03 21:24:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:24:33] wns0041.triumf.lcg
[2025-06-03 21:24:33] apptainer works
[2025-06-03 21:24:33] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:24:33] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:24:33] Starting ATLAS job with PandaID=6678246231
[2025-06-03 21:24:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:31:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246231/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard info from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | wrong length of table data, x=[1749011248.0], y=[1449.0] (must be same and length>=4)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . Timing measurements:
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . get job = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . initial setup = 4 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . payload setup = 44 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-in = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . payload execution = 82 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-out = 1 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . log creation = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246231/pilotlog.txt
[2025-06-03 21:31:07] 2025-06-04 04:30:49,545 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:31:07] - Log from pilotlog.txt -
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246231/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard info from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | wrong length of table data, x=[1749011248.0], y=[1449.0] (must be same and length>=4)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . Timing measurements:
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . get job = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . initial setup = 4 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . payload setup = 44 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-in = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . payload execution = 82 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-out = 1 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . log creation = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246231/pilotlog.txt
[2025-06-03 21:31:07] 2025-06-04 04:30:49,546 | WARNING  | 
[2025-06-03 21:31:07] [begin log extracts]
[2025-06-03 21:31:07] - Log from pilotlog.txt -
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:31:07] 2025-06-04 04:30:49,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678246231/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard info from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:31:07] 2025-06-04 04:30:49,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | WARNING  | wrong length of table data, x=[1749011248.0], y=[1449.0] (must be same and length>=4)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . Timing measurements:
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . get job = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . initial setup = 4 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,516 | INFO     | . payload setup = 44 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-in = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . payload execution = 82 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . stage-out = 1 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | . log creation = 0 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | ..............................
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:31:07] 2025-06-04 04:30:49,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678246231/pilotlog.txt
[2025-06-03 21:31:07] [end log extracts]
[2025-06-03 21:31:07] 2025-06-04 04:30:49,546 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,547 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:31:07] 2025-06-04 04:30:49,893 | INFO     | 
[2025-06-03 21:31:07] 2025-06-04 04:30:49,909 | INFO     | job summary report
[2025-06-03 21:31:07] 2025-06-04 04:30:49,909 | INFO     | --------------------------------------------------
[2025-06-03 21:31:07] 2025-06-04 04:30:49,909 | INFO     | PanDA job id: 6678246231
[2025-06-03 21:31:07] 2025-06-04 04:30:49,909 | INFO     | task id: 45006595
[2025-06-03 21:31:07] 2025-06-04 04:30:49,909 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:28:19,630 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | pilot state: failed 
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | transexitcode: 65
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | exeerrorcode: 65
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | exitcode: 65
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | nevents: 0
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | neventsw: 0
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | pid: 1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | pgrp: 1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | corecount: 12
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | event service: False
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | sizes: {0: 2404356, 1: 2405038, 2: 2405237, 13: 2405237, 24: 2405293, 29: 2405527, 35: 2405683, 131: 2428864, 134: 2433099, 136: 2433127, 271: 2433269}
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | --------------------------------------------------
[2025-06-03 21:31:07] 2025-06-04 04:30:49,910 | INFO     | 
[2025-06-03 21:31:07] 2025-06-04 04:30:49,911 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:31:07] 2025-06-04 04:30:50,014 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:31:07] 2025-06-04 04:30:50,016 | INFO     | job 6678246231 has completed (purged errors)
[2025-06-03 21:31:07] 2025-06-04 04:30:50,016 | INFO     | overall cleanup function is called
[2025-06-03 21:31:07] 2025-06-04 04:30:51,023 | INFO     | --- collectZombieJob: --- 10, [1110098]
[2025-06-03 21:31:07] 2025-06-04 04:30:51,023 | INFO     | zombie collector waiting for pid 1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:51,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:31:07] 2025-06-04 04:30:51,023 | INFO     | collected zombie processes
[2025-06-03 21:31:07] 2025-06-04 04:30:51,023 | INFO     | will attempt to kill all subprocesses of pid=1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:51,755 | INFO     | process IDs to be killed: [1110098] (in reverse order)
[2025-06-03 21:31:07] 2025-06-04 04:30:51,846 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:31:07] 2025-06-04 04:30:51,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:31:07] 2025-06-04 04:30:51,889 | INFO     | did not find any defunct processes belonging to 1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:51,920 | INFO     | did not find any defunct processes belonging to 1110098
[2025-06-03 21:31:07] 2025-06-04 04:30:51,920 | INFO     | ready for new job
[2025-06-03 21:31:07] 2025-06-04 04:30:51,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:31:07] 2025-06-04 04:30:51,922 | INFO     | **************************************
[2025-06-03 21:31:07] 2025-06-04 04:30:51,922 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:31:07] 2025-06-04 04:30:51,922 | INFO     | **************************************
[2025-06-03 21:31:07] 2025-06-04 04:30:51,922 | INFO     | 
[2025-06-03 21:31:07] 2025-06-04 04:30:51,924 | INFO     | architecture information:
[2025-06-03 21:31:07] 2025-06-04 04:30:51,949 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:31:07] 2025-06-04 04:30:52,068 | INFO     | cat /etc/os-release:
[2025-06-03 21:31:07] NAME="CentOS Linux"
[2025-06-03 21:31:07] VERSION="7 (Core)"
[2025-06-03 21:31:07] ID="centos"
[2025-06-03 21:31:07] ID_LIKE="rhel fedora"
[2025-06-03 21:31:07] VERSION_ID="7"
[2025-06-03 21:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:31:07] ANSI_COLOR="0;31"
[2025-06-03 21:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:31:07] HOME_URL="https://www.centos.org/"
[2025-06-03 21:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:31:07] 
[2025-06-03 21:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:31:07] 
[2025-06-03 21:31:07] 2025-06-04 04:30:52,068 | INFO     | **************************************
[2025-06-03 21:31:07] 2025-06-04 04:30:52,572 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:31:07] 2025-06-04 04:30:52,615 | INFO     | sufficient remaining disk space (1971531546624 B)
[2025-06-03 21:31:07] 2025-06-04 04:30:52,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:31:07] 2025-06-04 04:30:52,616 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:31:07] 2025-06-04 04:30:52,616 | INFO     | update_server=False
[2025-06-03 21:31:07] 2025-06-04 04:30:52,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:31:07] 2025-06-04 04:30:52,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:31:07] 2025-06-04 04:30:52,620 | INFO     | aborting loop
[2025-06-03 21:31:07] 2025-06-04 04:30:52,790 | INFO     | all data control threads have been joined
[2025-06-03 21:31:07] 2025-06-04 04:30:53,125 | INFO     | all job control threads have been joined
[2025-06-03 21:31:07] 2025-06-04 04:30:53,382 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:31:07] 2025-06-04 04:30:53,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:31:07] 2025-06-04 04:30:53,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:31:07] 2025-06-04 04:30:53,611 | INFO     | all payload control threads have been joined
[2025-06-03 21:31:07] 2025-06-04 04:30:53,622 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:53,626 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:53,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:31:07] 2025-06-04 04:30:53,797 | INFO     | [data] control thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,011 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,049 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,079 | INFO     | [job] validate thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,132 | INFO     | [job] control thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,303 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,414 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,528 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,617 | INFO     | [payload] control thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:54,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:31:07] 2025-06-04 04:30:54,848 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:55,650 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:55,667 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:30:56,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:31:07] 2025-06-04 04:31:00,095 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:31:07] 2025-06-04 04:31:01,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407979009856)>', '<ExcThread(monitor, started 140407287564032)>']
[2025-06-03 21:31:07] 2025-06-04 04:31:01,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:31:07] 2025-06-04 04:31:01,428 | INFO     | [monitor] control thread has ended
[2025-06-03 21:31:07] 2025-06-04 04:31:06,403 | INFO     | all workflow threads have been joined
[2025-06-03 21:31:07] 2025-06-04 04:31:06,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:31:07] 2025-06-04 04:31:06,403 | INFO     | traces error code: 0
[2025-06-03 21:31:07] 2025-06-04 04:31:06,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:31:07] 2025-06-04 04:31:06,694 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:31:07] 2025-06-04 04:31:06,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:31:07] 2025-06-04 04:31:06,743 [wrapper] pilotpid: 1102593
[2025-06-03 21:31:07] 2025-06-04 04:31:06,771 [wrapper] Pilot exit status: 0
[2025-06-03 21:31:07] 2025-06-04 04:31:06,856 [wrapper] pandaids: 6678246231
[2025-06-03 21:31:07] 2025-06-04 04:31:07,211 [wrapper] cleanup supervisor_pilot 1102599 1102594
[2025-06-03 21:31:07] 2025-06-04 04:31:07,224 [wrapper] Test setup, not cleaning
[2025-06-03 21:31:07] 2025-06-04 04:31:07,239 [wrapper] apfmon messages muted
[2025-06-03 21:31:07] 2025-06-04 04:31:07,265 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:31:07] 2025-06-04 04:31:07,292 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:31:07]  *** Error codes and diagnostics ***
[2025-06-03 21:31:07]     "exeErrorCode": 65,
[2025-06-03 21:31:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:31:07]     "pilotErrorCode": 1305,
[2025-06-03 21:31:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:31:08]  *** Listing of results directory ***
[2025-06-03 21:31:08] total 212888
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:59 pilot3.tar.gz
[2025-06-03 21:31:08] -rwx------. 1 boinc boinc     37140 Jun  3 18:55 runpilot2-wrapper.sh
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:55 queuedata.json
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:31:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:24 run_atlas
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:24 job.xml
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc 213952437 Jun  3 21:24 EVNT.45006593._002002.pool.root.1
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc      6602 Jun  3 21:24 init_data.xml
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:24 start_atlas.sh
[2025-06-03 21:31:08] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:24 shared
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc    508881 Jun  3 21:24 input.tar.gz
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:24 boinc_lockfile
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:24 pandaJob.out
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc    986745 Jun  3 21:25 agis_schedconf.cvmfs.json
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc   1603667 Jun  3 21:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:31:08] drwx------. 4 boinc boinc      4096 Jun  3 21:25 pilot3
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc       525 Jun  3 21:28 boinc_task_state.xml
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc       957 Jun  3 21:28 memory_monitor_summary.json
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc     20875 Jun  3 21:28 log.45006595._049938.job.log.tgz.1
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc        95 Jun  3 21:30 pilot_heartbeat.json
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc      8321 Jun  3 21:30 heartbeat.json
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc        23 Jun  3 21:31 wrapper_checkpoint.txt
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:31 boinc_mmap_file
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc      4352 Jun  3 21:31 pilotlog.txt
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc     83165 Jun  3 21:31 log.45006595._049938.job.log.1
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc       188 Jun  3 21:31 output.list
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:31 runtime_log
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc    122880 Jun  3 21:31 result.tar.gz
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:31 runtime_log.err
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc       645 Jun  3 21:31 EojMDmjWsg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNTaKDmGJNqWm.diag
[2025-06-03 21:31:08] -rw-r--r--. 1 boinc boinc     21682 Jun  3 21:31 stderr.txt
[2025-06-03 21:31:08] No HITS result produced
[2025-06-03 21:31:08]  *** Contents of shared directory: ***
[2025-06-03 21:31:08] total 209580
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc 213952437 Jun  3 21:24 ATLAS.root_0
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:24 start_atlas.sh
[2025-06-03 21:31:08] -rw-r--r--. 2 boinc boinc    508881 Jun  3 21:24 input.tar.gz
[2025-06-03 21:31:08] -rw-------. 1 boinc boinc    122880 Jun  3 21:31 result.tar.gz
21:31:09 (1090453): run_atlas exited; CPU time 32.469792
21:31:09 (1090453): called boinc_finish(0)

</stderr_txt>
]]>

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