Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:52 (825981): wrapper (7.7.26015): starting
00:05:52 (825981): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 00:05:52] Arguments: --nthreads 10
[2025-06-04 00:05:52] Threads: 10
[2025-06-04 00:05:52] Checking for CVMFS
[2025-06-04 00:05:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:05:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:05:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:05:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:05:52] 2.12.6.0 3581464 139020 257160 146767 1 530 18754398 32935936 13565 130560 0 362157830 99.604 384448299 28096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:05:52] CVMFS is ok
[2025-06-04 00:05:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:05:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:05:52] Further information can be found at the LHC@home message board.
[2025-06-04 00:05:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:05:52] Checking for apptainer binary...
[2025-06-04 00:05:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:05:52] Running /usr/bin/apptainer --version
[2025-06-04 00:05:52] apptainer version 1.4.1-1.el9
[2025-06-04 00:05:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:05:52] c-6-6.aglt2.org
[2025-06-04 00:05:52] apptainer works
[2025-06-04 00:05:52] Set ATHENA_PROC_NUMBER=10
[2025-06-04 00:05:52] Set ATHENA_CORE_NUMBER=10
[2025-06-04 00:05:52] Starting ATLAS job with PandaID=6678155192
[2025-06-04 00:05:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:50:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:50:05] 2025-06-04 06:49:53,692 | INFO     | sum of deviations: 36925988893.78259
[2025-06-04 02:50:05] 2025-06-04 06:49:53,692 | INFO     | mean x: 1749014874.0434783
[2025-06-04 02:50:05] 2025-06-04 06:49:53,692 | INFO     | mean y: 2196162.602484472
[2025-06-04 02:50:05] 2025-06-04 06:49:53,692 | INFO     | -- intersect: -49907074100.736435
[2025-06-04 02:50:05] 2025-06-04 06:49:53,692 | INFO     | intersect: -49907074100.736435
[2025-06-04 02:50:05] 2025-06-04 06:49:53,693 | INFO     | chi2: 3.850199327279623
[2025-06-04 02:50:05] 2025-06-04 06:49:53,694 | INFO     | sum of square deviations: 1177174346.6858943
[2025-06-04 02:50:05] 2025-06-04 06:49:53,694 | INFO     | sum of deviations: 44474041774.999985
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | mean x: 1749014721.5448718
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | mean y: 2205715.0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | -- intersect: -66076157282.008286
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | intersect: -66076157282.008286
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | chi2: 3.17957992803896
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | current chi2=3.17957992803896 (change=17.41778391807295 %)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,695 | INFO     | right removable region: 155
[2025-06-04 02:50:05] 2025-06-04 06:49:53,696 | INFO     | sum of square deviations: 1177170076.6858943
[2025-06-04 02:50:05] 2025-06-04 06:49:53,697 | INFO     | sum of deviations: 4605739653.499989
[2025-06-04 02:50:05] 2025-06-04 06:49:53,697 | INFO     | mean x: 1749015026.5448718
[2025-06-04 02:50:05] 2025-06-04 06:49:53,697 | INFO     | mean y: 2238143.5
[2025-06-04 02:50:05] 2025-06-04 06:49:53,698 | INFO     | -- intersect: -6840874862.73938
[2025-06-04 02:50:05] 2025-06-04 06:49:53,698 | INFO     | intersect: -6840874862.73938
[2025-06-04 02:50:05] 2025-06-04 06:49:53,698 | INFO     | chi2: 1.7114514063799673
[2025-06-04 02:50:05] 2025-06-04 06:49:53,698 | INFO     | current chi2=1.7114514063799673 (change=55.54901809228663 %)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,699 | INFO     | sum of square deviations: 1067565886.6754953
[2025-06-04 02:50:05] 2025-06-04 06:49:53,699 | INFO     | sum of deviations: -16003738223.105951
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | mean x: 1749015179.0463576
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | mean y: 2266831.4437086093
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | -- intersect: 26221520765.140232
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | intersect: 26221520765.140232
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | chi2: 0.8872728004847756
[2025-06-04 02:50:05] 2025-06-04 06:49:53,700 | INFO     | current chi2=0.8872728004847756 (change=48.15670505296321 %)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,701 | INFO     | sum of square deviations: 964985084.1643844
[2025-06-04 02:50:05] 2025-06-04 06:49:53,698 | INFO     | sufficient remaining disk space (76575408128 B)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,702 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,702 | INFO     | sum of deviations: -20026730408.84932
[2025-06-04 02:50:05] 2025-06-04 06:49:53,703 | INFO     | mean x: 1749015331.5479453
[2025-06-04 02:50:05] 2025-06-04 06:49:53,703 | INFO     | mean y: 2272679.335616438
[2025-06-04 02:50:05] 2025-06-04 06:49:53,703 | INFO     | -- intersect: 36300303706.60908
[2025-06-04 02:50:05] 2025-06-04 06:49:53,703 | INFO     | intersect: 36300303706.60908
[2025-06-04 02:50:05] 2025-06-04 06:49:53,704 | INFO     | chi2: 0.7890477561162343
[2025-06-04 02:50:05] 2025-06-04 06:49:53,704 | INFO     | current chi2=0.7890477561162343 (change=11.070444660861291 %)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,703 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678155192: 3640954 B (within 2537553920 B limit)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,704 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678155192/HITS.45006595._047860.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,705 | INFO     | total size of present files: 0 B (workdir size: 3640954 B)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,705 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678155192/HITS.45006595._047860.pool.root.1 since it does not exist
[2025-06-04 02:50:05] 2025-06-04 06:49:53,704 | INFO     | left removable region: 30
[2025-06-04 02:50:05] 2025-06-04 06:49:53,708 | INFO     | sum of square deviations: 605606541.7120006
[2025-06-04 02:50:05] 2025-06-04 06:49:53,709 | INFO     | sum of deviations: -7906319884.399996
[2025-06-04 02:50:05] 2025-06-04 06:49:53,709 | INFO     | mean x: 1749015606.048
[2025-06-04 02:50:05] 2025-06-04 06:49:53,709 | INFO     | mean y: 2279653.4
[2025-06-04 02:50:05] 2025-06-04 06:49:53,709 | INFO     | -- intersect: 22836043676.377354
[2025-06-04 02:50:05] 2025-06-04 06:49:53,709 | INFO     | intersect: 22836043676.377354
[2025-06-04 02:50:05] 2025-06-04 06:49:53,710 | INFO     | chi2: 0.08567840631021238
[2025-06-04 02:50:05] 2025-06-04 06:49:53,710 | INFO     | -- intersect: 22836043676.377354
[2025-06-04 02:50:05] 2025-06-04 06:49:53,710 | INFO     | current memory leak: -13.06 B/s (using 125 data points, chi2=0.09)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | ..............................
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . Timing measurements:
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . get job = 0 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . initial setup = 2 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . payload setup = 8 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . stage-in = 0 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . payload execution = 9791 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,711 | INFO     | . stage-out = 1 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,712 | INFO     | . log creation = 0 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,712 | INFO     | ..............................
[2025-06-04 02:50:05] 2025-06-04 06:49:53,852 | INFO     | 
[2025-06-04 02:50:05] 2025-06-04 06:49:53,853 | INFO     | job summary report
[2025-06-04 02:50:05] 2025-06-04 06:49:53,853 | INFO     | --------------------------------------------------
[2025-06-04 02:50:05] 2025-06-04 06:49:53,853 | INFO     | PanDA job id: 6678155192
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | task id: 45006595
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | errors: (none)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | pilot state: finished 
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | transexitcode: 0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,854 | INFO     | exeerrorcode: 0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | exeerrordiag: 
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | exitcode: 0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | exitmsg: OK
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | cpuconsumptiontime: 45649 s
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | nevents: 400
[2025-06-04 02:50:05] 2025-06-04 06:49:53,855 | INFO     | neventsw: 0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | pid: 865383
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | pgrp: 865383
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | corecount: 10
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | event service: False
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | sizes: {0: 2405011, 1: 2405210, 5: 2405416, 12: 2405472, 9803: 2433857, 9804: 2433856, 9805: 2443037, 9814: 2443179}
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | --------------------------------------------------
[2025-06-04 02:50:05] 2025-06-04 06:49:53,856 | INFO     | 
[2025-06-04 02:50:05] 2025-06-04 06:49:53,857 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:50:05] 2025-06-04 06:49:53,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:50:05] 2025-06-04 06:49:53,888 | INFO     | job 6678155192 has completed (purged errors)
[2025-06-04 02:50:05] 2025-06-04 06:49:53,889 | INFO     | overall cleanup function is called
[2025-06-04 02:50:05] 2025-06-04 06:49:54,292 | INFO     | number of running child processes to parent process 865383: 1
[2025-06-04 02:50:05] 2025-06-04 06:49:54,293 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:50:05] 2025-06-04 06:49:54,293 | INFO     | aborting job monitoring since job object (job id=6678155192) has expired
[2025-06-04 02:50:05] 2025-06-04 06:49:54,897 | INFO     | --- collectZombieJob: --- 10, [865383]
[2025-06-04 02:50:05] 2025-06-04 06:49:54,897 | INFO     | zombie collector waiting for pid 865383
[2025-06-04 02:50:05] 2025-06-04 06:49:54,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:50:05] 2025-06-04 06:49:54,898 | INFO     | collected zombie processes
[2025-06-04 02:50:05] 2025-06-04 06:49:54,898 | INFO     | will attempt to kill all subprocesses of pid=865383
[2025-06-04 02:50:05] 2025-06-04 06:49:55,324 | INFO     | process IDs to be killed: [865383] (in reverse order)
[2025-06-04 02:50:05] 2025-06-04 06:49:55,453 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:50:05] 2025-06-04 06:49:55,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:50:05] 2025-06-04 06:49:55,469 | INFO     | did not find any defunct processes belonging to 865383
[2025-06-04 02:50:05] 2025-06-04 06:49:55,486 | INFO     | did not find any defunct processes belonging to 865383
[2025-06-04 02:50:05] 2025-06-04 06:49:55,486 | INFO     | ready for new job
[2025-06-04 02:50:05] 2025-06-04 06:49:55,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:50:05] 2025-06-04 06:49:55,488 | INFO     | **************************************
[2025-06-04 02:50:05] 2025-06-04 06:49:55,488 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:50:05] 2025-06-04 06:49:55,489 | INFO     | **************************************
[2025-06-04 02:50:05] 2025-06-04 06:49:55,489 | INFO     | 
[2025-06-04 02:50:05] 2025-06-04 06:49:55,502 | INFO     | architecture information:
[2025-06-04 02:50:05] 2025-06-04 06:49:55,502 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:50:05] 2025-06-04 06:49:55,518 | INFO     | cat /etc/os-release:
[2025-06-04 02:50:05] NAME="CentOS Linux"
[2025-06-04 02:50:05] VERSION="7 (Core)"
[2025-06-04 02:50:05] ID="centos"
[2025-06-04 02:50:05] ID_LIKE="rhel fedora"
[2025-06-04 02:50:05] VERSION_ID="7"
[2025-06-04 02:50:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:50:05] ANSI_COLOR="0;31"
[2025-06-04 02:50:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:50:05] HOME_URL="https://www.centos.org/"
[2025-06-04 02:50:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:50:05] 
[2025-06-04 02:50:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:50:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:50:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:50:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:50:05] 
[2025-06-04 02:50:05] 2025-06-04 06:49:55,518 | INFO     | **************************************
[2025-06-04 02:50:05] 2025-06-04 06:49:56,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:50:05] 2025-06-04 06:49:56,039 | INFO     | sufficient remaining disk space (76579602432 B)
[2025-06-04 02:50:05] 2025-06-04 06:49:56,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:50:05] 2025-06-04 06:49:56,039 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:50:05] 2025-06-04 06:49:56,039 | INFO     | update_server=False
[2025-06-04 02:50:05] 2025-06-04 06:49:56,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:50:05] 2025-06-04 06:49:56,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:50:05] 2025-06-04 06:49:56,040 | INFO     | aborting loop
[2025-06-04 02:50:05] 2025-06-04 06:49:56,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:50:05] 2025-06-04 06:49:56,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:50:05] 2025-06-04 06:49:56,201 | INFO     | all payload control threads have been joined
[2025-06-04 02:50:05] 2025-06-04 06:49:56,297 | INFO     | all job control threads have been joined
[2025-06-04 02:50:05] 2025-06-04 06:49:56,447 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:50:05] 2025-06-04 06:49:56,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:50:05] 2025-06-04 06:49:56,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:50:05] 2025-06-04 06:49:56,938 | INFO     | all data control threads have been joined
[2025-06-04 02:50:05] 2025-06-04 06:49:57,044 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,045 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,206 | INFO     | [payload] control thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,302 | INFO     | [job] control thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,416 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,441 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,588 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,695 | INFO     | [job] validate thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,763 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:57,943 | INFO     | [data] control thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:58,015 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:58,039 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:58,045 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:49:58,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:50:05] 2025-06-04 06:49:59,871 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:50:00,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:50:05] 2025-06-04 06:50:00,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181160683328)>', '<ExcThread(monitor, started 140180652537600)>']
[2025-06-04 02:50:05] 2025-06-04 06:50:01,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:50:05] 2025-06-04 06:50:01,480 | INFO     | [monitor] control thread has ended
[2025-06-04 02:50:05] 2025-06-04 06:50:05,590 | INFO     | all workflow threads have been joined
[2025-06-04 02:50:05] 2025-06-04 06:50:05,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:50:05] 2025-06-04 06:50:05,591 | INFO     | traces error code: 0
[2025-06-04 02:50:05] 2025-06-04 06:50:05,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:50:05] 2025-06-04 06:50:05,764 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:50:05] 2025-06-04 06:50:05,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:50:05] 2025-06-04 06:50:05,771 [wrapper] pilotpid: 834181
[2025-06-04 02:50:05] 2025-06-04 06:50:05,775 [wrapper] Pilot exit status: 0
[2025-06-04 02:50:05] 2025-06-04 06:50:05,790 [wrapper] pandaids: 6678155192
[2025-06-04 02:50:05] 2025-06-04 06:50:05,882 [wrapper] cleanup supervisor_pilot 2199646 834182
[2025-06-04 02:50:05] 2025-06-04 06:50:05,885 [wrapper] Test setup, not cleaning
[2025-06-04 02:50:05] 2025-06-04 06:50:05,890 [wrapper] apfmon messages muted
[2025-06-04 02:50:05] 2025-06-04 06:50:05,894 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:50:05] 2025-06-04 06:50:05,899 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:50:05]  *** Error codes and diagnostics ***
[2025-06-04 02:50:05]     "exeErrorCode": 0,
[2025-06-04 02:50:05]     "exeErrorDiag": "",
[2025-06-04 02:50:05]     "pilotErrorCode": 0,
[2025-06-04 02:50:05]     "pilotErrorDiag": "",
[2025-06-04 02:50:05]  *** Listing of results directory ***
[2025-06-04 02:50:05] total 399932
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 02:50:05] -rwx------. 1 boincer umatlas     37140 Jun  3 19:16 runpilot2-wrapper.sh
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:16 queuedata.json
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:50:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:05 run_atlas
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:05 job.xml
[2025-06-04 02:50:05] -rw-r--r--. 2 boincer umatlas 217423943 Jun  4 00:05 EVNT.45006593._001922.pool.root.1
[2025-06-04 02:50:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:05 start_atlas.sh
[2025-06-04 02:50:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:05 shared
[2025-06-04 02:50:05] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 00:05 input.tar.gz
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:05 boinc_lockfile
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 00:05 pandaJob.out
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas    986077 Jun  4 00:06 agis_schedconf.cvmfs.json
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:50:05] drwx------. 4 boincer umatlas      4096 Jun  4 00:06 pilot3
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:49 boinc_task_state.xml
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas 185732507 Jun  4 02:49 HITS.45006595._047860.pool.root.1
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas      6673 Jun  4 02:49 init_data.xml
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas      1043 Jun  4 02:49 memory_monitor_summary.json
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas    375634 Jun  4 02:49 log.45006595._047860.job.log.tgz.1
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas        95 Jun  4 02:49 pilot_heartbeat.json
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas      7717 Jun  4 02:49 heartbeat.json
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:50 boinc_mmap_file
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:50 wrapper_checkpoint.txt
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas      4353 Jun  4 02:50 pilotlog.txt
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas    895415 Jun  4 02:50 log.45006595._047860.job.log.1
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas       357 Jun  4 02:50 output.list
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:50 runtime_log
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas   1290240 Jun  4 02:50 result.tar.gz
[2025-06-04 02:50:05] -rw-------. 1 boincer umatlas       651 Jun  4 02:50 WjpKDmS3pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEEaKDm56nYZm.diag
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas      8646 Jun  4 02:50 runtime_log.err
[2025-06-04 02:50:05] -rw-r--r--. 1 boincer umatlas     21206 Jun  4 02:50 stderr.txt
[2025-06-04 02:50:06] HITS file was successfully produced:
[2025-06-04 02:50:06] -rw-------. 1 boincer umatlas 185732507 Jun  4 02:49 shared/HITS.pool.root.1
[2025-06-04 02:50:06]  *** Contents of shared directory: ***
[2025-06-04 02:50:06] total 395492
[2025-06-04 02:50:06] -rw-r--r--. 2 boincer umatlas 217423943 Jun  4 00:05 ATLAS.root_0
[2025-06-04 02:50:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:05 start_atlas.sh
[2025-06-04 02:50:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 00:05 input.tar.gz
[2025-06-04 02:50:06] -rw-------. 1 boincer umatlas 185732507 Jun  4 02:49 HITS.pool.root.1
[2025-06-04 02:50:06] -rw-------. 1 boincer umatlas   1290240 Jun  4 02:50 result.tar.gz
02:50:07 (825981): run_atlas exited; CPU time 45973.653975
02:50:07 (825981): called boinc_finish(0)

</stderr_txt>
]]>

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