Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:29 (475): wrapper (7.7.26015): starting
00:06:29 (475): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:06:29] Arguments: --nthreads 8
[2025-06-04 00:06:29] Threads: 8
[2025-06-04 00:06:29] Checking for CVMFS
[2025-06-04 00:06:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:06:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:06:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:06:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:06:29] 2.11.2.0 3129 10936 72516 146767 0 56 19362334 20275201 1 130560 0 4100308 99.986 1848987 33673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:06:29] CVMFS is ok
[2025-06-04 00:06:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:06:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:06:29] Further information can be found at the LHC@home message board.
[2025-06-04 00:06:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:06:29] Checking for apptainer binary...
[2025-06-04 00:06:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:06:29] Running /usr/bin/apptainer --version
[2025-06-04 00:06:29] apptainer version 1.3.2-1.el7
[2025-06-04 00:06:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:06:31] c-204-31.aglt2.org
[2025-06-04 00:06:31] apptainer works
[2025-06-04 00:06:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:06:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:06:31] Starting ATLAS job with PandaID=6678071242
[2025-06-04 00:06:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:57:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:57:36] 2025-06-04 05:57:22,981 | INFO     | mean y: 2500419.053763441
[2025-06-04 01:57:36] 2025-06-04 05:57:22,981 | INFO     | -- intersect: -8001043457.365608
[2025-06-04 01:57:36] 2025-06-04 05:57:22,981 | INFO     | intersect: -8001043457.365608
[2025-06-04 01:57:36] 2025-06-04 05:57:22,981 | INFO     | chi2: 0.00047984141767475644
[2025-06-04 01:57:36] 2025-06-04 05:57:22,981 | INFO     | current chi2=0.00047984141767475644 (change=97.85707132091474 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,982 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,982 | INFO     | sum of deviations: 811825758.9999998
[2025-06-04 01:57:36] 2025-06-04 05:57:22,982 | INFO     | mean x: 1749013914.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,982 | INFO     | mean y: 2501732.8863636362
[2025-06-04 01:57:36] 2025-06-04 05:57:22,982 | INFO     | -- intersect: -6717753015.870622
[2025-06-04 01:57:36] 2025-06-04 05:57:22,983 | INFO     | intersect: -6717753015.870622
[2025-06-04 01:57:36] 2025-06-04 05:57:22,983 | INFO     | chi2: 0.0003520306595818765
[2025-06-04 01:57:36] 2025-06-04 05:57:22,983 | INFO     | current chi2=0.0003520306595818765 (change=26.63604128051988 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,983 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,983 | INFO     | sum of deviations: 532468512.0000001
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | mean x: 1749014067.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | mean y: 2502986.506024096
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | -- intersect: -5250862035.378671
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | intersect: -5250862035.378671
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | chi2: 0.0002271048505492745
[2025-06-04 01:57:36] 2025-06-04 05:57:22,984 | INFO     | current chi2=0.0002271048505492745 (change=35.487195683745924 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | sum of deviations: 265412281.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | mean x: 1749014219.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | mean y: 2504338.6923076925
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | -- intersect: -3152671093.198114
[2025-06-04 01:57:36] 2025-06-04 05:57:22,985 | INFO     | intersect: -3152671093.198114
[2025-06-04 01:57:36] 2025-06-04 05:57:22,986 | INFO     | chi2: 2.707584386998421e-05
[2025-06-04 01:57:36] 2025-06-04 05:57:22,986 | INFO     | current chi2=2.707584386998421e-05 (change=88.07782229023347 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,986 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,986 | INFO     | sum of deviations: 180768009.99999994
[2025-06-04 01:57:36] 2025-06-04 05:57:22,986 | INFO     | mean x: 1749014372.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | mean y: 2504819.7260273974
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | -- intersect: -2618992723.2445574
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | intersect: -2618992723.2445574
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | chi2: 1.0325546874382378e-05
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | current chi2=1.0325546874382378e-05 (change=61.864358045626446 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,987 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | sum of deviations: 124121885.00000001
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | mean x: 1749014524.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | mean y: 2505193.911764706
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | -- intersect: -2224547784.3949323
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | intersect: -2224547784.3949323
[2025-06-04 01:57:36] 2025-06-04 05:57:22,988 | INFO     | chi2: 6.146871647153907e-06
[2025-06-04 01:57:36] 2025-06-04 05:57:22,989 | INFO     | current chi2=6.146871647153907e-06 (change=40.46928727422409 %)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,989 | INFO     | left removable region not found
[2025-06-04 01:57:36] 2025-06-04 05:57:22,989 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,989 | INFO     | sum of deviations: 12241705334.0
[2025-06-04 01:57:36] 2025-06-04 05:57:22,989 | INFO     | mean x: 1749013121.5
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | mean y: 2465591.0196078434
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | -- intersect: -65070079793.7339
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | intersect: -65070079793.7339
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | chi2: 1.4905815221525354
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | -- intersect: -65070079793.7339
[2025-06-04 01:57:36] 2025-06-04 05:57:22,990 | INFO     | current memory leak: 37.21 B/s (using 102 data points, chi2=1.49)
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | ..............................
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . Timing measurements:
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . get job = 0 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . initial setup = 3 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . payload setup = 11 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . stage-in = 0 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,991 | INFO     | . payload execution = 6591 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,992 | INFO     | . stage-out = 0 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,992 | INFO     | . log creation = 0 s
[2025-06-04 01:57:36] 2025-06-04 05:57:22,992 | INFO     | ..............................
[2025-06-04 01:57:36] 2025-06-04 05:57:23,087 | INFO     | 
[2025-06-04 01:57:36] 2025-06-04 05:57:23,087 | INFO     | job summary report
[2025-06-04 01:57:36] 2025-06-04 05:57:23,087 | INFO     | --------------------------------------------------
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | PanDA job id: 6678071242
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | task id: 45006595
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | errors: (none)
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | pilot state: finished 
[2025-06-04 01:57:36] 2025-06-04 05:57:23,088 | INFO     | transexitcode: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | exeerrorcode: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | exeerrordiag: 
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | exitcode: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | exitmsg: OK
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | cpuconsumptiontime: 48731 s
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | nevents: 400
[2025-06-04 01:57:36] 2025-06-04 05:57:23,089 | INFO     | neventsw: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | pid: 10793
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | pgrp: 10793
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | corecount: 8
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | event service: False
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | sizes: {0: 2404962, 1: 2405161, 7: 2405367, 12: 2405395, 6606: 2432321, 6607: 2432320, 6608: 2441445, 6611: 2441501, 6619: 2441671}
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | --------------------------------------------------
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | 
[2025-06-04 01:57:36] 2025-06-04 05:57:23,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:57:36] 2025-06-04 05:57:23,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:57:36] 2025-06-04 05:57:23,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,122 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:57:36] 2025-06-04 05:57:23,122 | INFO     | job 6678071242 has completed (purged errors)
[2025-06-04 01:57:36] 2025-06-04 05:57:23,122 | INFO     | overall cleanup function is called
[2025-06-04 01:57:36] 2025-06-04 05:57:24,131 | INFO     | --- collectZombieJob: --- 10, [10793]
[2025-06-04 01:57:36] 2025-06-04 05:57:24,131 | INFO     | zombie collector waiting for pid 10793
[2025-06-04 01:57:36] 2025-06-04 05:57:24,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:57:36] 2025-06-04 05:57:24,131 | INFO     | collected zombie processes
[2025-06-04 01:57:36] 2025-06-04 05:57:24,131 | INFO     | will attempt to kill all subprocesses of pid=10793
[2025-06-04 01:57:36] 2025-06-04 05:57:24,221 | INFO     | process IDs to be killed: [10793] (in reverse order)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,272 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:57:36] 2025-06-04 05:57:24,276 | INFO     | did not find any defunct processes belonging to 10793
[2025-06-04 01:57:36] 2025-06-04 05:57:24,280 | INFO     | did not find any defunct processes belonging to 10793
[2025-06-04 01:57:36] 2025-06-04 05:57:24,280 | INFO     | ready for new job
[2025-06-04 01:57:36] 2025-06-04 05:57:24,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:57:36] 2025-06-04 05:57:24,282 | INFO     | **************************************
[2025-06-04 01:57:36] 2025-06-04 05:57:24,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:57:36] 2025-06-04 05:57:24,282 | INFO     | **************************************
[2025-06-04 01:57:36] 2025-06-04 05:57:24,282 | INFO     | 
[2025-06-04 01:57:36] 2025-06-04 05:57:24,282 | INFO     | architecture information:
[2025-06-04 01:57:36] 2025-06-04 05:57:24,283 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:57:36] 2025-06-04 05:57:24,300 | INFO     | cat /etc/os-release:
[2025-06-04 01:57:36] NAME="CentOS Linux"
[2025-06-04 01:57:36] VERSION="7 (Core)"
[2025-06-04 01:57:36] ID="centos"
[2025-06-04 01:57:36] ID_LIKE="rhel fedora"
[2025-06-04 01:57:36] VERSION_ID="7"
[2025-06-04 01:57:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:57:36] ANSI_COLOR="0;31"
[2025-06-04 01:57:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:57:36] HOME_URL="https://www.centos.org/"
[2025-06-04 01:57:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:57:36] 
[2025-06-04 01:57:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:57:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:57:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:57:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:57:36] 
[2025-06-04 01:57:36] 2025-06-04 05:57:24,300 | INFO     | **************************************
[2025-06-04 01:57:36] 2025-06-04 05:57:24,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:57:36] 2025-06-04 05:57:24,823 | INFO     | sufficient remaining disk space (18617466880 B)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:57:36] 2025-06-04 05:57:24,824 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:57:36] 2025-06-04 05:57:24,824 | INFO     | update_server=False
[2025-06-04 01:57:36] 2025-06-04 05:57:24,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:57:36] 2025-06-04 05:57:24,825 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,825 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:57:36] 2025-06-04 05:57:24,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:57:36] 2025-06-04 05:57:24,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:57:36] 2025-06-04 05:57:24,954 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 01:57:36] 2025-06-04 05:57:24,954 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 01:57:36] 2025-06-04 05:57:24,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:57:36] 2025-06-04 05:57:24,962 | INFO     | will abort loop
[2025-06-04 01:57:36] 2025-06-04 05:57:25,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:57:36] 2025-06-04 05:57:25,442 | INFO     | all job control threads have been joined
[2025-06-04 01:57:36] 2025-06-04 05:57:25,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:57:36] 2025-06-04 05:57:25,736 | INFO     | all payload control threads have been joined
[2025-06-04 01:57:36] 2025-06-04 05:57:25,830 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:25,831 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:25,836 | INFO     | all data control threads have been joined
[2025-06-04 01:57:36] 2025-06-04 05:57:25,873 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:25,968 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,002 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,448 | INFO     | [job] control thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,627 | INFO     | [job] validate thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,741 | INFO     | [payload] control thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,840 | INFO     | [data] control thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,898 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,899 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:26,900 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:27,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:27,399 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:29,686 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:57:36] 2025-06-04 05:57:31,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131267090240)>', '<ExcThread(monitor, started 140130530608896)>']
[2025-06-04 01:57:36] 2025-06-04 05:57:31,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:57:36] 2025-06-04 05:57:31,858 | INFO     | [monitor] control thread has ended
[2025-06-04 01:57:36] 2025-06-04 05:57:36,087 | INFO     | all workflow threads have been joined
[2025-06-04 01:57:36] 2025-06-04 05:57:36,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:57:36] 2025-06-04 05:57:36,091 | INFO     | traces error code: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:36,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:57:36] 2025-06-04 05:57:36,204 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:57:36] 2025-06-04 05:57:36,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:57:36] 2025-06-04 05:57:36,214 [wrapper] pilotpid: 4279
[2025-06-04 01:57:36] 2025-06-04 05:57:36,219 [wrapper] Pilot exit status: 0
[2025-06-04 01:57:36] 2025-06-04 05:57:36,236 [wrapper] pandaids: 6678071242
[2025-06-04 01:57:36] 2025-06-04 05:57:36,284 [wrapper] cleanup supervisor_pilot 22005 4280
[2025-06-04 01:57:36] 2025-06-04 05:57:36,289 [wrapper] Test setup, not cleaning
[2025-06-04 01:57:36] 2025-06-04 05:57:36,294 [wrapper] apfmon messages muted
[2025-06-04 01:57:36] 2025-06-04 05:57:36,298 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:57:36] 2025-06-04 05:57:36,303 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:57:36]  *** Error codes and diagnostics ***
[2025-06-04 01:57:36]     "exeErrorCode": 0,
[2025-06-04 01:57:36]     "exeErrorDiag": "",
[2025-06-04 01:57:36]     "pilotErrorCode": 0,
[2025-06-04 01:57:36]     "pilotErrorDiag": "",
[2025-06-04 01:57:36]  *** Listing of results directory ***
[2025-06-04 01:57:36] total 386060
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 16:36 pilot3.tar.gz
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 16:38 queuedata.json
[2025-06-04 01:57:36] -rwx------ 1 boincer umatlas     37140 Jun  3 16:39 runpilot2-wrapper.sh
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:57:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:06 run_atlas
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:06 job.xml
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas 213386422 Jun  4 00:06 EVNT.45006593._001809.pool.root.1
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:06 start_atlas.sh
[2025-06-04 01:57:36] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:06 shared
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 00:06 input.tar.gz
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:06 boinc_lockfile
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 00:06 pandaJob.out
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas    986077 Jun  4 00:06 agis_schedconf.cvmfs.json
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas   1603667 Jun  4 00:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:57:36] drwx------ 4 boincer umatlas      4096 Jun  4 00:06 pilot3
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 01:56 init_data.xml
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas 176212869 Jun  4 01:56 HITS.45006595._045104.pool.root.1
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:57 boinc_task_state.xml
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas      1050 Jun  4 01:57 memory_monitor_summary.json
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas    331858 Jun  4 01:57 log.45006595._045104.job.log.tgz.1
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas        95 Jun  4 01:57 pilot_heartbeat.json
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:57 wrapper_checkpoint.txt
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:57 boinc_mmap_file
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas      7749 Jun  4 01:57 heartbeat.json
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas      4662 Jun  4 01:57 pilotlog.txt
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas    614887 Jun  4 01:57 log.45006595._045104.job.log.1
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas       357 Jun  4 01:57 output.list
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:57 runtime_log
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas    962560 Jun  4 01:57 result.tar.gz
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 01:57 runtime_log.err
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas       659 Jun  4 01:57 A8JMDm4ang7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr4lKDmZJq3Cn.diag
[2025-06-04 01:57:36] -rw-r--r-- 1 boincer umatlas     20860 Jun  4 01:57 stderr.txt
[2025-06-04 01:57:36] HITS file was successfully produced:
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas 176212869 Jun  4 01:56 shared/HITS.pool.root.1
[2025-06-04 01:57:36]  *** Contents of shared directory: ***
[2025-06-04 01:57:36] total 381932
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas 213386422 Jun  4 00:06 ATLAS.root_0
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:06 start_atlas.sh
[2025-06-04 01:57:36] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 00:06 input.tar.gz
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas 176212869 Jun  4 01:56 HITS.pool.root.1
[2025-06-04 01:57:36] -rw------- 1 boincer umatlas    962560 Jun  4 01:57 result.tar.gz
01:57:37 (475): run_atlas exited; CPU time 48686.652368
01:57:37 (475): called boinc_finish(0)

</stderr_txt>
]]>

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