Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:57:20 (3105740): wrapper (7.7.26015): starting
23:57:20 (3105740): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:57:20] Arguments: --nthreads 8
[2025-06-03 23:57:20] Threads: 8
[2025-06-03 23:57:20] Checking for CVMFS
[2025-06-03 23:57:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:57:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:57:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:57:21] 2.12.6.0 4082173 23254 313700 146767 1 617 26291116 40960001 26120 16776704 1 320112938 99.792 170921706 27379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:57:21] CVMFS is ok
[2025-06-03 23:57:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:57:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:57:21] Further information can be found at the LHC@home message board.
[2025-06-03 23:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:57:21] Checking for apptainer binary...
[2025-06-03 23:57:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:57:21] Running /usr/bin/apptainer --version
[2025-06-03 23:57:21] apptainer version 1.4.1-1.el9
[2025-06-03 23:57:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:57:21] c8-7-6.aglt2.org
[2025-06-03 23:57:21] apptainer works
[2025-06-03 23:57:21] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:57:21] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:57:21] Starting ATLAS job with PandaID=6666950113
[2025-06-03 23:57:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:04:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:04:06]  guid=9bb6cf2e-be97-4356-a434-10f4d2b450ab
[2025-06-04 01:04:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 01:04:06]  is_altstaged=None
[2025-06-04 01:04:06]  is_tar=False
[2025-06-04 01:04:06]  lfn=log.44871837._067228.job.log.tgz.1
[2025-06-04 01:04:06]  mtime=0
[2025-06-04 01:04:06]  protocol_id=None
[2025-06-04 01:04:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:04:06]  replicas=None
[2025-06-04 01:04:06]  scope=mc23_13p6TeV
[2025-06-04 01:04:06]  status=None
[2025-06-04 01:04:06]  status_code=0
[2025-06-04 01:04:06]  storage_token=
[2025-06-04 01:04:06]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6666950113/log.44871837._067228.job.log.tgz.1
[2025-06-04 01:04:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/62/log.44871837._067228.job.log.tgz.1
[2025-06-04 01:04:06]  workdir=None
[2025-06-04 01:04:06] ]
[2025-06-04 01:04:06] 2025-06-04 05:03:38,788 | INFO     | transferring file log.44871837._067228.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6666950113/log.44871837._067228.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:04:06] 2025-06-04 05:03:38,788 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6666950113/log.44871837._067228.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._067228.job
[2025-06-04 01:04:06] 2025-06-04 05:03:38,808 | INFO     | adding to output.list: log.44871837._067228.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/62/log.44871837._067228.job.log.tg
[2025-06-04 01:04:06] 2025-06-04 05:03:38,808 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:04:06] 2025-06-04 05:03:38,808 | INFO     | summary of transferred files:
[2025-06-04 01:04:06] 2025-06-04 05:03:38,808 | INFO     |  -- lfn=log.44871837._067228.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:04:06] 2025-06-04 05:03:38,809 | INFO     | stage-out finished correctly
[2025-06-04 01:04:06] 2025-06-04 05:03:39,671 | INFO     | monitor loop #292: job 0:6666950113 is in state 'finished'
[2025-06-04 01:04:06] 2025-06-04 05:03:39,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:04:06] 2025-06-04 05:03:39,978 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:04:06] 2025-06-04 05:03:42,174 | INFO     | monitor loop #293: job 0:6666950113 is in state 'finished'
[2025-06-04 01:04:06] 2025-06-04 05:03:42,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:04:06] 2025-06-04 05:03:42,309 | INFO     | job 6666950113 has state=finished
[2025-06-04 01:04:06] 2025-06-04 05:03:42,309 | INFO     | preparing for final server update for job 6666950113 in state='finished'
[2025-06-04 01:04:06] 2025-06-04 05:03:42,309 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:04:06] 2025-06-04 05:03:42,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:04:06] 2025-06-04 05:03:42,310 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:04:06] 2025-06-04 05:03:42,310 | INFO     | job 6666950113 has finished - writing final server update
[2025-06-04 01:04:06] 2025-06-04 05:03:42,310 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:04:06] 2025-06-04 05:03:42,328 | INFO     | executing command: lscpu
[2025-06-04 01:04:06] 2025-06-04 05:03:42,404 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:04:06] 2025-06-04 05:03:44,679 | INFO     | monitor loop #294: job 0:6666950113 is in state 'finished'
[2025-06-04 01:04:06] 2025-06-04 05:03:44,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,305 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:04:06] 2025-06-04 05:03:46,305 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666950113/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,306 | INFO     | extracted standard info from prmon json
[2025-06-04 01:04:06] 2025-06-04 05:03:46,306 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:04:06] 2025-06-04 05:03:46,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:04:06] 2025-06-04 05:03:46,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:04:06] 2025-06-04 05:03:46,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:04:06] 2025-06-04 05:03:46,307 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:04:06] 2025-06-04 05:03:46,307 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 01:04:06] 2025-06-04 05:03:46,307 | INFO     | sum of deviations: 5482848024.500001
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | mean x: 1749011519.5
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | mean y: 2435744.8448275863
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | -- intersect: -158547325783.8824
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | intersect: -158547325783.8824
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | chi2: 0.762593195333282
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | -- intersect: -158547325783.8824
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | current memory leak: 90.65 B/s (using 58 data points, chi2=0.76)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | ..............................
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . Timing measurements:
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . get job = 0 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . initial setup = 2 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . payload setup = 6 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . stage-in = 0 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . payload execution = 3943 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . stage-out = 0 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | . log creation = 0 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,308 | INFO     | ..............................
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | 
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | job summary report
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | --------------------------------------------------
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | PanDA job id: 6666950113
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | task id: 44871837
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | errors: (none)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | pilot state: finished 
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | transexitcode: 0
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | exeerrorcode: 0
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | exeerrordiag: 
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | exitcode: 0
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | exitmsg: OK
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | cpuconsumptiontime: 26805 s
[2025-06-04 01:04:06] 2025-06-04 05:03:46,361 | INFO     | nevents: 400
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | neventsw: 0
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | pid: 3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | pgrp: 3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | corecount: 8
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | event service: False
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 3952: 2431244, 3953: 2440185, 3954: 2440241, 3960: 2440539}
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | --------------------------------------------------
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | 
[2025-06-04 01:04:06] 2025-06-04 05:03:46,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | job 6666950113 has completed (purged errors)
[2025-06-04 01:04:06] 2025-06-04 05:03:46,378 | INFO     | overall cleanup function is called
[2025-06-04 01:04:06] 2025-06-04 05:03:47,385 | INFO     | --- collectZombieJob: --- 10, [3130088]
[2025-06-04 01:04:06] 2025-06-04 05:03:47,386 | INFO     | zombie collector waiting for pid 3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:47,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:04:06] 2025-06-04 05:03:47,386 | INFO     | collected zombie processes
[2025-06-04 01:04:06] 2025-06-04 05:03:47,386 | INFO     | will attempt to kill all subprocesses of pid=3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:47,813 | INFO     | process IDs to be killed: [3130088] (in reverse order)
[2025-06-04 01:04:06] 2025-06-04 05:03:47,965 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:04:06] 2025-06-04 05:03:47,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:04:06] 2025-06-04 05:03:47,993 | INFO     | did not find any defunct processes belonging to 3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:48,018 | INFO     | did not find any defunct processes belonging to 3130088
[2025-06-04 01:04:06] 2025-06-04 05:03:48,018 | INFO     | ready for new job
[2025-06-04 01:04:06] 2025-06-04 05:03:48,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:04:06] 2025-06-04 05:03:48,020 | INFO     | **************************************
[2025-06-04 01:04:06] 2025-06-04 05:03:48,020 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:04:06] 2025-06-04 05:03:48,020 | INFO     | **************************************
[2025-06-04 01:04:06] 2025-06-04 05:03:48,020 | INFO     | 
[2025-06-04 01:04:06] 2025-06-04 05:03:48,038 | INFO     | architecture information:
[2025-06-04 01:04:06] 2025-06-04 05:03:48,038 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:04:06] 2025-06-04 05:03:48,053 | INFO     | cat /etc/os-release:
[2025-06-04 01:04:06] NAME="CentOS Linux"
[2025-06-04 01:04:06] VERSION="7 (Core)"
[2025-06-04 01:04:06] ID="centos"
[2025-06-04 01:04:06] ID_LIKE="rhel fedora"
[2025-06-04 01:04:06] VERSION_ID="7"
[2025-06-04 01:04:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:04:06] ANSI_COLOR="0;31"
[2025-06-04 01:04:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:04:06] HOME_URL="https://www.centos.org/"
[2025-06-04 01:04:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:04:06] 
[2025-06-04 01:04:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:04:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:04:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:04:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:04:06] 
[2025-06-04 01:04:06] 2025-06-04 05:03:48,054 | INFO     | **************************************
[2025-06-04 01:04:06] 2025-06-04 05:03:48,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | INFO     | sufficient remaining disk space (172062932992 B)
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | INFO     | update_server=False
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:04:06] 2025-06-04 05:03:48,572 | INFO     | aborting loop
[2025-06-04 01:04:06] 2025-06-04 05:03:48,674 | INFO     | all job control threads have been joined
[2025-06-04 01:04:06] 2025-06-04 05:03:48,962 | INFO     | all data control threads have been joined
[2025-06-04 01:04:06] 2025-06-04 05:03:49,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:04:06] 2025-06-04 05:03:49,464 | INFO     | all payload control threads have been joined
[2025-06-04 01:04:06] 2025-06-04 05:03:49,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:04:06] 2025-06-04 05:03:49,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:04:06] 2025-06-04 05:03:49,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:04:06] 2025-06-04 05:03:49,577 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,577 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,598 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,680 | INFO     | [job] control thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,715 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,880 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:49,967 | INFO     | [data] control thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,050 | INFO     | [job] validate thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,144 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,330 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,343 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,469 | INFO     | [payload] control thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:50,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:04:06] 2025-06-04 05:03:51,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:04:06] 2025-06-04 05:03:51,379 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:52,372 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:54,551 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:03:58,804 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:04:06] 2025-06-04 05:03:59,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:04:06] 2025-06-04 05:04:01,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466145859392)>', '<ExcThread(monitor, started 140465202513664)>']
[2025-06-04 01:04:06] 2025-06-04 05:04:01,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:04:06] 2025-06-04 05:04:01,601 | INFO     | [monitor] control thread has ended
[2025-06-04 01:04:06] 2025-06-04 05:04:06,072 | INFO     | all workflow threads have been joined
[2025-06-04 01:04:06] 2025-06-04 05:04:06,073 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:04:06] 2025-06-04 05:04:06,073 | INFO     | traces error code: 0
[2025-06-04 01:04:06] 2025-06-04 05:04:06,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:04:06] 2025-06-04 05:04:06,184 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:04:06] 2025-06-04 05:04:06,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:04:06] 2025-06-04 05:04:06,190 [wrapper] pilotpid: 3110969
[2025-06-04 01:04:06] 2025-06-04 05:04:06,192 [wrapper] Pilot exit status: 0
[2025-06-04 01:04:06] 2025-06-04 05:04:06,202 [wrapper] pandaids: 6666950113
[2025-06-04 01:04:06] 2025-06-04 05:04:06,315 [wrapper] cleanup supervisor_pilot 4078718 3110970
[2025-06-04 01:04:06] 2025-06-04 05:04:06,317 [wrapper] Test setup, not cleaning
[2025-06-04 01:04:06] 2025-06-04 05:04:06,320 [wrapper] apfmon messages muted
[2025-06-04 01:04:06] 2025-06-04 05:04:06,323 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:04:06] 2025-06-04 05:04:06,325 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:04:06]  *** Error codes and diagnostics ***
[2025-06-04 01:04:06]     "exeErrorCode": 0,
[2025-06-04 01:04:06]     "exeErrorDiag": "",
[2025-06-04 01:04:06]     "pilotErrorCode": 0,
[2025-06-04 01:04:06]     "pilotErrorDiag": "",
[2025-06-04 01:04:06]  *** Listing of results directory ***
[2025-06-04 01:04:06] total 422468
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas    495897 May 27 07:59 pilot3.tar.gz
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas      5111 May 27 08:13 queuedata.json
[2025-06-04 01:04:06] -rwx------. 1 boincer umatlas     37140 May 27 08:15 runpilot2-wrapper.sh
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:04:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:57 run_atlas
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:57 job.xml
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas 223145270 Jun  3 23:57 EVNT.44871834._002647.pool.root.1
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:57 start_atlas.sh
[2025-06-04 01:04:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:57 shared
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 23:57 input.tar.gz
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:57 boinc_lockfile
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 23:57 pandaJob.out
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas    986077 Jun  3 23:57 agis_schedconf.cvmfs.json
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:04:06] drwx------. 4 boincer umatlas      4096 Jun  3 23:57 pilot3
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 01:02 init_data.xml
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas        95 Jun  4 01:02 pilot_heartbeat.json
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas 204234305 Jun  4 01:03 HITS.44871837._067228.pool.root.1
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas       529 Jun  4 01:03 boinc_task_state.xml
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas      1034 Jun  4 01:03 memory_monitor_summary.json
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas    300003 Jun  4 01:03 log.44871837._067228.job.log.tgz.1
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas      7689 Jun  4 01:03 heartbeat.json
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:04 boinc_mmap_file
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:04 wrapper_checkpoint.txt
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas      4426 Jun  4 01:04 pilotlog.txt
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas    397973 Jun  4 01:04 log.44871837._067228.job.log.1
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas       357 Jun  4 01:04 output.list
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:04 runtime_log
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas    716800 Jun  4 01:04 result.tar.gz
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 01:04 runtime_log.err
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas       649 Jun  4 01:04 FeNMDmwO8d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMOZKDmCxIM2m.diag
[2025-06-04 01:04:06] -rw-r--r--. 1 boincer umatlas     21285 Jun  4 01:04 stderr.txt
[2025-06-04 01:04:06] HITS file was successfully produced:
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas 204234305 Jun  4 01:03 shared/HITS.pool.root.1
[2025-06-04 01:04:06]  *** Contents of shared directory: ***
[2025-06-04 01:04:06] total 418584
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas 223145270 Jun  3 23:57 ATLAS.root_0
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:57 start_atlas.sh
[2025-06-04 01:04:06] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 23:57 input.tar.gz
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas 204234305 Jun  4 01:03 HITS.pool.root.1
[2025-06-04 01:04:06] -rw-------. 1 boincer umatlas    716800 Jun  4 01:04 result.tar.gz
01:04:07 (3105740): run_atlas exited; CPU time 26916.960072
01:04:07 (3105740): called boinc_finish(0)

</stderr_txt>
]]>

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