Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:00 (957520): wrapper (7.7.26015): starting
22:43:00 (957520): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 22:43:00] Arguments: --nthreads 4
[2025-06-05 22:43:00] Threads: 4
[2025-06-05 22:43:00] Checking for CVMFS
[2025-06-05 22:43:00] No cvmfs_config command found, will try listing directly
[2025-06-05 22:43:00] CVMFS is ok
[2025-06-05 22:43:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 22:43:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 22:43:00] Further information can be found at the LHC@home message board.
[2025-06-05 22:43:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:43:00] Checking for apptainer binary...
[2025-06-05 22:43:00] which: no apptainer in ((null))
[2025-06-05 22:43:00] apptainer is not installed, using version from CVMFS
[2025-06-05 22:43:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:43:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 22:43:00] apptainer works
[2025-06-05 22:43:00] Set ATHENA_PROC_NUMBER=4
[2025-06-05 22:43:00] Set ATHENA_CORE_NUMBER=4
[2025-06-05 22:43:00] Starting ATLAS job with PandaID=6678155119
[2025-06-05 22:43:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:13:23]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:13:23] 2025-06-05 23:11:48,914 | INFO     | executing command: lscpu
[2025-06-06 01:13:23] 2025-06-05 23:11:49,030 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 01:13:23] 2025-06-05 23:11:52,101 | WARNING  | process 971116 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 01:13:23] 2025-06-05 23:11:52,102 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6678155119/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:13:23] 2025-06-05 23:11:52,795 | INFO     | number of running child processes to parent process 971116: 1
[2025-06-06 01:13:23] 2025-06-05 23:11:52,795 | INFO     | maximum number of monitored processes: 6
[2025-06-06 01:13:23] 2025-06-05 23:11:55,041 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 01:13:23] 2025-06-05 23:11:55,042 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6678155119/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,043 | INFO     | extracted standard info from prmon json
[2025-06-06 01:13:23] 2025-06-05 23:11:55,043 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:13:23] 2025-06-05 23:11:55,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:13:23] 2025-06-05 23:11:55,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:13:23] 2025-06-05 23:11:55,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:13:23] 2025-06-05 23:11:55,046 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:13:23] 2025-06-05 23:11:55,047 | INFO     | sum of square deviations: 964976232.5
[2025-06-06 01:13:23] 2025-06-05 23:11:55,047 | INFO     | sum of deviations: 19078428198.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,047 | INFO     | mean x: 1749160650.5
[2025-06-06 01:13:23] 2025-06-05 23:11:55,048 | INFO     | mean y: 2292590.178082192
[2025-06-06 01:13:23] 2025-06-05 23:11:55,048 | INFO     | -- intersect: -34580150742.00131
[2025-06-06 01:13:23] 2025-06-05 23:11:55,048 | INFO     | intersect: -34580150742.00131
[2025-06-06 01:13:23] 2025-06-05 23:11:55,048 | INFO     | chi2: 1.7503357206698165
[2025-06-06 01:13:23] 2025-06-05 23:11:55,048 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,049 | INFO     | sum of deviations: 18390799110.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,049 | INFO     | mean x: 1749160498.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,049 | INFO     | mean y: 2291494.985815603
[2025-06-06 01:13:23] 2025-06-05 23:11:55,049 | INFO     | -- intersect: -37007474972.17277
[2025-06-06 01:13:23] 2025-06-05 23:11:55,050 | INFO     | intersect: -37007474972.17277
[2025-06-06 01:13:23] 2025-06-05 23:11:55,050 | INFO     | chi2: 1.7527600064056728
[2025-06-06 01:13:23] 2025-06-05 23:11:55,050 | INFO     | current chi2=1.7527600064056728 (change=-0.13850404280891712 %)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,050 | INFO     | right removable region: 140
[2025-06-06 01:13:23] 2025-06-05 23:11:55,052 | INFO     | sum of square deviations: 869188390.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,053 | INFO     | sum of deviations: -4849514517.999999
[2025-06-06 01:13:23] 2025-06-05 23:11:55,053 | INFO     | mean x: 1749160803.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,053 | INFO     | mean y: 2330180.631205674
[2025-06-06 01:13:23] 2025-06-05 23:11:55,054 | INFO     | -- intersect: 9761527158.014942
[2025-06-06 01:13:23] 2025-06-05 23:11:55,054 | INFO     | intersect: 9761527158.014942
[2025-06-06 01:13:23] 2025-06-05 23:11:55,054 | INFO     | chi2: 0.01829009936764155
[2025-06-06 01:13:23] 2025-06-05 23:11:55,054 | INFO     | current chi2=0.01829009936764155 (change=98.9550519279443 %)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,054 | INFO     | sum of square deviations: 779958810.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,055 | INFO     | sum of deviations: -4689164336.500001
[2025-06-06 01:13:23] 2025-06-05 23:11:55,055 | INFO     | mean x: 1749160955.5
[2025-06-06 01:13:23] 2025-06-05 23:11:55,055 | INFO     | mean y: 2329879.7720588236
[2025-06-06 01:13:23] 2025-06-05 23:11:55,055 | INFO     | -- intersect: 10518402095.596975
[2025-06-06 01:13:23] 2025-06-05 23:11:55,055 | INFO     | intersect: 10518402095.596975
[2025-06-06 01:13:23] 2025-06-05 23:11:55,056 | INFO     | chi2: 0.01635812655223449
[2025-06-06 01:13:23] 2025-06-05 23:11:55,056 | INFO     | current chi2=0.01635812655223449 (change=10.562943243627549 %)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,056 | INFO     | left removable region: 20
[2025-06-06 01:13:23] 2025-06-05 23:11:55,056 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | sum of deviations: -2006409132.999999
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | mean x: 1749161077.5
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | mean y: 2324839.033333333
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | -- intersect: 6552566141.145539
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | intersect: 6552566141.145539
[2025-06-06 01:13:23] 2025-06-05 23:11:55,057 | INFO     | chi2: 0.01193491591937567
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | -- intersect: 6552566141.145539
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | current memory leak: -3.74 B/s (using 120 data points, chi2=0.01)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | ..............................
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | . Timing measurements:
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | . get job = 0 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | . initial setup = 1 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,058 | INFO     | . payload setup = 9 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,059 | INFO     | . stage-in = 0 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,059 | INFO     | . payload execution = 8881 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,059 | INFO     | . stage-out = 0 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,059 | INFO     | . log creation = 0 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,059 | INFO     | ..............................
[2025-06-06 01:13:23] 2025-06-05 23:11:55,252 | INFO     | 
[2025-06-06 01:13:23] 2025-06-05 23:11:55,252 | INFO     | job summary report
[2025-06-06 01:13:23] 2025-06-05 23:11:55,252 | INFO     | --------------------------------------------------
[2025-06-06 01:13:23] 2025-06-05 23:11:55,252 | INFO     | PanDA job id: 6678155119
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | task id: 45006595
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | errors: (none)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | pilot state: finished 
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | transexitcode: 0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | exeerrorcode: 0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | exeerrordiag: 
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | exitcode: 0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | exitmsg: OK
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | cpuconsumptiontime: 33562 s
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | nevents: 400
[2025-06-06 01:13:23] 2025-06-05 23:11:55,253 | INFO     | neventsw: 0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | pid: 971116
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | pgrp: 971116
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | corecount: 4
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | event service: False
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | sizes: {0: 2397183, 1: 2397382, 7: 2397588, 11: 2397616, 8894: 2425939, 8895: 2425938, 8896: 2435143, 8903: 2435257}
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | --------------------------------------------------
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | 
[2025-06-06 01:13:23] 2025-06-05 23:11:55,254 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-06 01:13:23] 2025-06-05 23:11:55,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | job 6678155119 has completed (purged errors)
[2025-06-06 01:13:23] 2025-06-05 23:11:55,285 | INFO     | overall cleanup function is called
[2025-06-06 01:13:23] 2025-06-05 23:11:56,294 | INFO     | --- collectZombieJob: --- 10, [971116]
[2025-06-06 01:13:23] 2025-06-05 23:11:56,294 | INFO     | zombie collector waiting for pid 971116
[2025-06-06 01:13:23] 2025-06-05 23:11:56,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:13:23] 2025-06-05 23:11:56,295 | INFO     | collected zombie processes
[2025-06-06 01:13:23] 2025-06-05 23:11:56,295 | INFO     | will attempt to kill all subprocesses of pid=971116
[2025-06-06 01:13:23] 2025-06-05 23:11:56,961 | INFO     | PID=963762 has CPU usage=21.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 01:13:23] 2025-06-05 23:11:56,961 | INFO     | .. there are 14 such processes running
[2025-06-06 01:13:23] 2025-06-05 23:11:57,379 | INFO     | process IDs to be killed: [971116] (in reverse order)
[2025-06-06 01:13:23] 2025-06-05 23:11:57,605 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:13:23] 2025-06-05 23:11:57,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:13:23] 2025-06-05 23:11:57,632 | INFO     | did not find any defunct processes belonging to 971116
[2025-06-06 01:13:23] 2025-06-05 23:11:57,660 | INFO     | did not find any defunct processes belonging to 971116
[2025-06-06 01:13:23] 2025-06-05 23:11:57,660 | INFO     | ready for new job
[2025-06-06 01:13:23] 2025-06-05 23:11:57,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:13:23] 2025-06-05 23:11:57,662 | INFO     | **************************************
[2025-06-06 01:13:23] 2025-06-05 23:11:57,662 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:13:23] 2025-06-05 23:11:57,662 | INFO     | **************************************
[2025-06-06 01:13:23] 2025-06-05 23:11:57,662 | INFO     | 
[2025-06-06 01:13:23] 2025-06-05 23:11:57,670 | INFO     | architecture information:
[2025-06-06 01:13:23] 2025-06-05 23:11:57,671 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:13:23] 2025-06-05 23:11:57,695 | INFO     | cat /etc/os-release:
[2025-06-06 01:13:23] NAME="CentOS Linux"
[2025-06-06 01:13:23] VERSION="7 (Core)"
[2025-06-06 01:13:23] ID="centos"
[2025-06-06 01:13:23] ID_LIKE="rhel fedora"
[2025-06-06 01:13:23] VERSION_ID="7"
[2025-06-06 01:13:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:13:23] ANSI_COLOR="0;31"
[2025-06-06 01:13:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:13:23] HOME_URL="https://www.centos.org/"
[2025-06-06 01:13:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:13:23] 
[2025-06-06 01:13:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:13:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:13:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:13:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:13:23] 
[2025-06-06 01:13:23] 2025-06-05 23:11:57,695 | INFO     | **************************************
[2025-06-06 01:13:23] 2025-06-05 23:11:58,198 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-06 01:13:23] 2025-06-05 23:11:58,225 | INFO     | sufficient remaining disk space (3268444946432 B)
[2025-06-06 01:13:23] 2025-06-05 23:11:58,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:13:23] 2025-06-05 23:11:58,226 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:13:23] 2025-06-05 23:11:58,226 | INFO     | update_server=False
[2025-06-06 01:13:23] 2025-06-05 23:11:58,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:13:23] 2025-06-05 23:11:58,256 | INFO     | all payload control threads have been joined
[2025-06-06 01:13:23] 2025-06-05 23:11:58,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:13:23] 2025-06-05 23:11:58,553 | INFO     | all data control threads have been joined
[2025-06-06 01:13:23] 2025-06-05 23:11:58,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:13:23] 2025-06-05 23:11:58,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:13:23] 2025-06-05 23:11:58,814 | INFO     | aborting loop
[2025-06-06 01:13:23] 2025-06-05 23:11:58,967 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:13:23] 2025-06-05 23:11:58,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:13:23] 2025-06-05 23:11:58,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:13:23] 2025-06-05 23:11:59,232 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,262 | INFO     | [payload] control thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,491 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,519 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,558 | INFO     | [data] control thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,584 | INFO     | all job control threads have been joined
[2025-06-06 01:13:23] 2025-06-05 23:11:59,819 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:11:59,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,124 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:13:23] 2025-06-05 23:12:00,502 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,515 | INFO     | [job] validate thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,543 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,589 | INFO     | [job] control thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,670 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:00,730 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:01,167 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:02,777 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:13:23] 2025-06-05 23:12:03,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22548848813888)>', '<ExcThread(monitor, started 22548611827456)>']
[2025-06-06 01:13:23] 2025-06-05 23:12:03,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:13:23] 2025-06-05 23:12:03,992 | INFO     | [monitor] control thread has ended
[2025-06-06 01:13:23] 2025-06-05 23:12:08,107 | INFO     | all workflow threads have been joined
[2025-06-06 01:13:23] 2025-06-05 23:12:08,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:13:23] 2025-06-05 23:12:08,108 | INFO     | traces error code: 0
[2025-06-06 01:13:23] 2025-06-05 23:12:08,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:13:23] 2025-06-05 23:12:08,258 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:13:23] 2025-06-05 23:12:08,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:13:23] 2025-06-05 23:12:08,263 [wrapper] pilotpid: 963762
[2025-06-06 01:13:23] 2025-06-05 23:12:08,266 [wrapper] Pilot exit status: 0
[2025-06-06 01:13:23] 2025-06-05 23:12:08,279 [wrapper] pandaids: 6678155119
[2025-06-06 01:13:23] 2025-06-05 23:12:08,440 [wrapper] cleanup supervisor_pilot 1473786 963763
[2025-06-06 01:13:23] 2025-06-05 23:12:08,445 [wrapper] Test setup, not cleaning
[2025-06-06 01:13:23] 2025-06-05 23:12:08,449 [wrapper] apfmon messages muted
[2025-06-06 01:13:23] 2025-06-05 23:12:08,452 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:13:23] 2025-06-05 23:12:08,456 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:13:23]  *** Error codes and diagnostics ***
[2025-06-06 01:13:23]     "exeErrorCode": 0,
[2025-06-06 01:13:23]     "exeErrorDiag": "",
[2025-06-06 01:13:23]     "pilotErrorCode": 0,
[2025-06-06 01:13:23]     "pilotErrorDiag": "",
[2025-06-06 01:13:23]  *** Listing of results directory ***
[2025-06-06 01:13:23] total 397804
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:58 queuedata.json
[2025-06-06 01:13:23] -rwx------ 1 boinc boinc     37140 Jun  4 00:59 runpilot2-wrapper.sh
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc       100 Jun  5 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:13:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 22:42 run_atlas
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc       105 Jun  5 22:42 job.xml
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc      6688 Jun  5 22:43 init_data.xml
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc 215119636 Jun  5 22:43 EVNT.45006593._001919.pool.root.1
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:43 start_atlas.sh
[2025-06-06 01:13:23] drwxrwx--x 2 boinc boinc      4096 Jun  5 22:43 shared
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc    508882 Jun  5 22:43 input.tar.gz
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc         0 Jun  5 22:43 boinc_lockfile
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc      2525 Jun  5 22:43 pandaJob.out
[2025-06-06 01:13:23] -rw------- 1 boinc boinc    987599 Jun  5 22:43 agis_schedconf.cvmfs.json
[2025-06-06 01:13:23] -rw------- 1 boinc boinc   1598969 Jun  5 22:43 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:13:23] drwx------ 4 boinc boinc      4096 Jun  5 22:43 pilot3
[2025-06-06 01:13:23] -rw------- 1 boinc boinc        95 Jun  6 01:11 pilot_heartbeat.json
[2025-06-06 01:13:23] -rw------- 1 boinc boinc 186180668 Jun  6 01:11 HITS.45006595._047787.pool.root.1
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc       528 Jun  6 01:11 boinc_task_state.xml
[2025-06-06 01:13:23] -rw------- 1 boinc boinc      1027 Jun  6 01:11 memory_monitor_summary.json
[2025-06-06 01:13:23] -rw------- 1 boinc boinc    272096 Jun  6 01:11 log.45006595._047787.job.log.tgz.1
[2025-06-06 01:13:23] -rw------- 1 boinc boinc      7709 Jun  6 01:11 heartbeat.json
[2025-06-06 01:13:23] -rw------- 1 boinc boinc      4365 Jun  6 01:12 pilotlog.txt
[2025-06-06 01:13:23] -rw------- 1 boinc boinc    835263 Jun  6 01:12 log.45006595._047787.job.log.1
[2025-06-06 01:13:23] -rw------- 1 boinc boinc       357 Jun  6 01:12 output.list
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc       620 Jun  6 01:12 runtime_log
[2025-06-06 01:13:23] -rw------- 1 boinc boinc   1126400 Jun  6 01:12 result.tar.gz
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc      9040 Jun  6 01:12 runtime_log.err
[2025-06-06 01:13:23] -rw------- 1 boinc boinc       662 Jun  6 01:12 470NDmxmpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBUmKDmWV5ZEn.diag
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc        26 Jun  6 01:13 wrapper_checkpoint.txt
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc      8192 Jun  6 01:13 boinc_mmap_file
[2025-06-06 01:13:23] -rw-r--r-- 1 boinc boinc     21005 Jun  6 01:13 stderr.txt
[2025-06-06 01:13:23] HITS file was successfully produced:
[2025-06-06 01:13:23] -rw------- 1 boinc boinc 186180668 Jun  6 01:11 shared/HITS.pool.root.1
[2025-06-06 01:13:23]  *** Contents of shared directory: ***
[2025-06-06 01:13:23] total 393524
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc 215119636 Jun  5 22:43 ATLAS.root_0
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:43 start_atlas.sh
[2025-06-06 01:13:23] -rw-r--r-- 2 boinc boinc    508882 Jun  5 22:43 input.tar.gz
[2025-06-06 01:13:23] -rw------- 1 boinc boinc 186180668 Jun  6 01:11 HITS.pool.root.1
[2025-06-06 01:13:23] -rw------- 1 boinc boinc   1126400 Jun  6 01:12 result.tar.gz
01:13:24 (957520): run_atlas exited; CPU time 34052.065188
01:13:24 (957520): called boinc_finish(0)

</stderr_txt>
]]>

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