Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:32:10 (250797): wrapper (7.7.26015): starting
07:32:10 (250797): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 07:32:10] Arguments: --nthreads 4
[2025-06-06 07:32:10] Threads: 4
[2025-06-06 07:32:10] Checking for CVMFS
[2025-06-06 07:32:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:32:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:32:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:32:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:32:10] 2.13.0.0 142616 193 46228 146833 3 56 3507608 4096000 6 130560 0 279149 99.989 144206 1263 http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-06-06 07:32:10] CVMFS is ok
[2025-06-06 07:32:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:32:10] Checking for apptainer binary...
[2025-06-06 07:32:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 07:32:10] Running /usr/bin/apptainer --version
[2025-06-06 07:32:10] apptainer version 1.4.0
[2025-06-06 07:32:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:32:10] Zen
[2025-06-06 07:32:10] apptainer works
[2025-06-06 07:32:10] Set ATHENA_PROC_NUMBER=4
[2025-06-06 07:32:10] Set ATHENA_CORE_NUMBER=4
[2025-06-06 07:32:10] Starting ATLAS job with PandaID=6678154413
[2025-06-06 07:32:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:05:38]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:05:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 09:05:38]  is_altstaged=None
[2025-06-06 09:05:38]  is_tar=False
[2025-06-06 09:05:38]  lfn=log.45006595._047733.job.log.tgz.1
[2025-06-06 09:05:38]  mtime=0
[2025-06-06 09:05:38]  protocol_id=None
[2025-06-06 09:05:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 09:05:38]  replicas=None
[2025-06-06 09:05:38]  scope=mc23_13p6TeV
[2025-06-06 09:05:38]  status=None
[2025-06-06 09:05:38]  status_code=0
[2025-06-06 09:05:38]  storage_token=
[2025-06-06 09:05:38]  surl=/home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678154413/log.45006595._047733.job.log.tgz.1
[2025-06-06 09:05:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/bc/log.45006595._047733.job.log.tgz.1
[2025-06-06 09:05:38]  workdir=None
[2025-06-06 09:05:38] ]
[2025-06-06 09:05:38] 2025-06-05 23:05:09,972 | INFO     | transferring file log.45006595._047733.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678154413/log.45006595._047733.job.log.tgz.1 to /home/mic
[2025-06-06 09:05:38] 2025-06-05 23:05:09,972 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678154413/log.45006595._047733.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/26/
[2025-06-06 09:05:38] 2025-06-05 23:05:10,007 | INFO     | adding to output.list: log.45006595._047733.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/bc/log.45006595._047733.job.log.tg
[2025-06-06 09:05:38] 2025-06-05 23:05:10,008 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 09:05:38] 2025-06-05 23:05:10,008 | INFO     | summary of transferred files:
[2025-06-06 09:05:38] 2025-06-05 23:05:10,008 | INFO     |  -- lfn=log.45006595._047733.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 09:05:38] 2025-06-05 23:05:10,008 | INFO     | stage-out finished correctly
[2025-06-06 09:05:38] 2025-06-05 23:05:10,898 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 09:05:38] 2025-06-05 23:05:12,251 | INFO     | monitor loop #418: job 0:6678154413 is in state 'finished'
[2025-06-06 09:05:38] 2025-06-05 23:05:12,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:05:38] 2025-06-05 23:05:13,428 | INFO     | job 6678154413 has state=finished
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | preparing for final server update for job 6678154413 in state='finished'
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | this job has now completed (state=finished)
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | log transfer has been attempted: DONE
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | job 6678154413 has finished - writing final server update
[2025-06-06 09:05:38] 2025-06-05 23:05:13,429 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:05:38] 2025-06-05 23:05:13,442 | INFO     | executing command: lscpu
[2025-06-06 09:05:38] 2025-06-05 23:05:13,502 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:05:38] 2025-06-05 23:05:14,753 | INFO     | monitor loop #419: job 0:6678154413 is in state 'finished'
[2025-06-06 09:05:38] 2025-06-05 23:05:14,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:05:38] 2025-06-05 23:05:17,256 | INFO     | monitor loop #420: job 0:6678154413 is in state 'finished'
[2025-06-06 09:05:38] 2025-06-05 23:05:17,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,250 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:05:38] 2025-06-05 23:05:19,250 | INFO     | using path: /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678154413/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,251 | INFO     | extracted standard info from prmon json
[2025-06-06 09:05:38] 2025-06-05 23:05:19,251 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:05:38] 2025-06-05 23:05:19,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:05:38] 2025-06-05 23:05:19,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:05:38] 2025-06-05 23:05:19,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:05:38] 2025-06-05 23:05:19,252 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | sum of square deviations: 183761585.0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | sum of deviations: -5704156116.0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | mean x: 1749162005.5
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | mean y: 2371518.0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | -- intersect: 54298230750.75341
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | intersect: 54298230750.75341
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | chi2: 0.02257473237831271
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | -- intersect: 54298230750.75341
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | current memory leak: -31.04 B/s (using 84 data points, chi2=0.02)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,253 | INFO     | ..............................
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . Timing measurements:
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . get job = 0 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . initial setup = 10 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . payload setup = 4 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . stage-in = 0 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . payload execution = 5540 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . stage-out = 0 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | . log creation = 0 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,254 | INFO     | ..............................
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | 
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | job summary report
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | --------------------------------------------------
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | PanDA job id: 6678154413
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | task id: 45006595
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | errors: (none)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | pilot state: finished 
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | transexitcode: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | exeerrorcode: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | exeerrordiag: 
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | exitcode: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | exitmsg: OK
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | cpuconsumptiontime: 21113 s
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | nevents: 400
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | neventsw: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | pid: 281494
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | pgrp: 281494
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | corecount: 4
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | event service: False
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | sizes: {0: 2397183, 1: 2397382, 3: 2397588, 11: 2397616, 5549: 2424179, 5550: 2433144, 5551: 2433328, 5559: 2433498}
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | --------------------------------------------------
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | 
[2025-06-06 09:05:38] 2025-06-05 23:05:19,311 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/26
[2025-06-06 09:05:38] 2025-06-05 23:05:19,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:05:38] 2025-06-05 23:05:19,361 | INFO     | job 6678154413 has completed (purged errors)
[2025-06-06 09:05:38] 2025-06-05 23:05:19,361 | INFO     | overall cleanup function is called
[2025-06-06 09:05:38] 2025-06-05 23:05:20,367 | INFO     | --- collectZombieJob: --- 10, [281494]
[2025-06-06 09:05:38] 2025-06-05 23:05:20,367 | INFO     | zombie collector waiting for pid 281494
[2025-06-06 09:05:38] 2025-06-05 23:05:20,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:05:38] 2025-06-05 23:05:20,368 | INFO     | collected zombie processes
[2025-06-06 09:05:38] 2025-06-05 23:05:20,368 | INFO     | will attempt to kill all subprocesses of pid=281494
[2025-06-06 09:05:38] 2025-06-05 23:05:20,487 | INFO     | process IDs to be killed: [281494] (in reverse order)
[2025-06-06 09:05:38] 2025-06-05 23:05:20,553 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:05:38] 2025-06-05 23:05:20,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:05:38] 2025-06-05 23:05:20,556 | INFO     | did not find any defunct processes belonging to 281494
[2025-06-06 09:05:38] 2025-06-05 23:05:20,559 | INFO     | did not find any defunct processes belonging to 281494
[2025-06-06 09:05:38] 2025-06-05 23:05:20,559 | INFO     | ready for new job
[2025-06-06 09:05:38] 2025-06-05 23:05:20,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:05:38] 2025-06-05 23:05:20,560 | INFO     | **************************************
[2025-06-06 09:05:38] 2025-06-05 23:05:20,560 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:05:38] 2025-06-05 23:05:20,560 | INFO     | **************************************
[2025-06-06 09:05:38] 2025-06-05 23:05:20,560 | INFO     | 
[2025-06-06 09:05:38] 2025-06-05 23:05:20,561 | INFO     | architecture information:
[2025-06-06 09:05:38] 2025-06-05 23:05:20,561 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:05:38] 2025-06-05 23:05:20,588 | INFO     | cat /etc/os-release:
[2025-06-06 09:05:38] NAME="CentOS Linux"
[2025-06-06 09:05:38] VERSION="7 (Core)"
[2025-06-06 09:05:38] ID="centos"
[2025-06-06 09:05:38] ID_LIKE="rhel fedora"
[2025-06-06 09:05:38] VERSION_ID="7"
[2025-06-06 09:05:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:05:38] ANSI_COLOR="0;31"
[2025-06-06 09:05:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:05:38] HOME_URL="https://www.centos.org/"
[2025-06-06 09:05:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:05:38] 
[2025-06-06 09:05:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:05:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:05:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:05:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:05:38] 
[2025-06-06 09:05:38] 2025-06-05 23:05:20,588 | INFO     | **************************************
[2025-06-06 09:05:38] 2025-06-05 23:05:21,091 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/26
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | INFO     | sufficient remaining disk space (358710509568 B)
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | INFO     | update_server=False
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:05:38] 2025-06-05 23:05:21,116 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:05:38] 2025-06-05 23:05:21,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:05:38] 2025-06-05 23:05:21,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:05:38] 2025-06-05 23:05:21,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:05:38] 2025-06-05 23:05:21,118 | INFO     | aborting loop
[2025-06-06 09:05:38] 2025-06-05 23:05:21,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:05:38] 2025-06-05 23:05:21,131 | INFO     | all job control threads have been joined
[2025-06-06 09:05:38] 2025-06-05 23:05:21,274 | INFO     | all data control threads have been joined
[2025-06-06 09:05:38] 2025-06-05 23:05:21,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:05:38] 2025-06-05 23:05:22,120 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,122 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,123 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,137 | INFO     | [job] control thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,279 | INFO     | [data] control thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,331 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,361 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,405 | INFO     | [job] validate thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,540 | INFO     | all payload control threads have been joined
[2025-06-06 09:05:38] 2025-06-05 23:05:22,557 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:22,844 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:23,123 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:23,354 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:23,545 | INFO     | [payload] control thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:25,465 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:31,382 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:05:38] 2025-06-05 23:05:32,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:05:38] 2025-06-05 23:05:33,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131703324632896)>', '<ExcThread(monitor, started 131703035098880)>']
[2025-06-06 09:05:38] 2025-06-05 23:05:33,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:05:38] 2025-06-05 23:05:33,177 | INFO     | [monitor] control thread has ended
[2025-06-06 09:05:38] 2025-06-05 23:05:38,053 | INFO     | all workflow threads have been joined
[2025-06-06 09:05:38] 2025-06-05 23:05:38,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:05:38] 2025-06-05 23:05:38,053 | INFO     | traces error code: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:38,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:05:38] 2025-06-05 23:05:38,120 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:05:38] 2025-06-05 23:05:38,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:05:38] 2025-06-05 23:05:38,132 [wrapper] pilotpid: 261492
[2025-06-06 09:05:38] 2025-06-05 23:05:38,142 [wrapper] Pilot exit status: 0
[2025-06-06 09:05:38] 2025-06-05 23:05:38,150 [wrapper] pandaids: 6678154413
[2025-06-06 09:05:38] 2025-06-05 23:05:38,179 [wrapper] cleanup supervisor_pilot  328577 261494
[2025-06-06 09:05:38] 2025-06-05 23:05:38,185 [wrapper] Test setup, not cleaning
[2025-06-06 09:05:38] 2025-06-05 23:05:38,201 [wrapper] apfmon messages muted
[2025-06-06 09:05:38] 2025-06-05 23:05:38,216 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:05:38] 2025-06-05 23:05:38,231 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:05:38]  *** Error codes and diagnostics ***
[2025-06-06 09:05:38]     "exeErrorCode": 0,
[2025-06-06 09:05:38]     "exeErrorDiag": "",
[2025-06-06 09:05:38]     "pilotErrorCode": 0,
[2025-06-06 09:05:38]     "pilotErrorDiag": "",
[2025-06-06 09:05:38]  *** Listing of results directory ***
[2025-06-06 09:05:38] total 395208
[2025-06-06 09:05:38] -rw-r--r-- 1 michael michael    495897 Jun  4 08:42 pilot3.tar.gz
[2025-06-06 09:05:38] -rw-r--r-- 1 michael michael      5111 Jun  4 08:55 queuedata.json
[2025-06-06 09:05:38] -rwx------ 1 michael michael     37140 Jun  4 08:55 runpilot2-wrapper.sh
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael       100 Jun  6 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:05:38] -rwxr-xr-x 1 michael michael      7986 Jun  6 07:32 run_atlas
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael       105 Jun  6 07:32 job.xml
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael 215917550 Jun  6 07:32 EVNT.45006593._001915.pool.root.1
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael     15093 Jun  6 07:32 start_atlas.sh
[2025-06-06 09:05:38] drwxrwx--x 2 michael michael      4096 Jun  6 07:32 shared
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael    508875 Jun  6 07:32 input.tar.gz
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael      9802 Jun  6 07:32 init_data.xml
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael         0 Jun  6 07:32 boinc_lockfile
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael      2525 Jun  6 07:32 pandaJob.out
[2025-06-06 09:05:38] -rw------- 1 michael michael    987599 Jun  6 07:32 agis_schedconf.cvmfs.json
[2025-06-06 09:05:38] -rw------- 1 michael michael   1598969 Jun  6 07:32 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:05:38] drwx------ 4 michael michael      4096 Jun  6 07:32 pilot3
[2025-06-06 09:05:38] -rw------- 1 michael michael 183291935 Jun  6 09:04 HITS.45006595._047733.pool.root.1
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael       529 Jun  6 09:04 boinc_task_state.xml
[2025-06-06 09:05:38] -rw------- 1 michael michael      1017 Jun  6 09:05 memory_monitor_summary.json
[2025-06-06 09:05:38] -rw------- 1 michael michael    266210 Jun  6 09:05 log.45006595._047733.job.log.tgz.1
[2025-06-06 09:05:38] -rw------- 1 michael michael        95 Jun  6 09:05 pilot_heartbeat.json
[2025-06-06 09:05:38] -rw------- 1 michael michael      7639 Jun  6 09:05 heartbeat.json
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael      8192 Jun  6 09:05 boinc_mmap_file
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael        27 Jun  6 09:05 wrapper_checkpoint.txt
[2025-06-06 09:05:38] -rw------- 1 michael michael      4561 Jun  6 09:05 pilotlog.txt
[2025-06-06 09:05:38] -rw------- 1 michael michael    555353 Jun  6 09:05 log.45006595._047733.job.log.1
[2025-06-06 09:05:38] -rw------- 1 michael michael       357 Jun  6 09:05 output.list
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael       620 Jun  6 09:05 runtime_log
[2025-06-06 09:05:38] -rw------- 1 michael michael    839680 Jun  6 09:05 result.tar.gz
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael      8767 Jun  6 09:05 runtime_log.err
[2025-06-06 09:05:38] -rw------- 1 michael michael       641 Jun  6 09:05 3OsLDm4ipg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDDaKDmrH4fOm.diag
[2025-06-06 09:05:38] -rw-rw-r-- 1 michael michael     21072 Jun  6 09:05 stderr.txt
[2025-06-06 09:05:38] HITS file was successfully produced:
[2025-06-06 09:05:38] -rw------- 1 michael michael 183291935 Jun  6 09:04 shared/HITS.pool.root.1
[2025-06-06 09:05:38]  *** Contents of shared directory: ***
[2025-06-06 09:05:38] total 391204
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael 215917550 Jun  6 07:32 ATLAS.root_0
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael     15093 Jun  6 07:32 start_atlas.sh
[2025-06-06 09:05:38] -rw-r--r-- 2 michael michael    508875 Jun  6 07:32 input.tar.gz
[2025-06-06 09:05:38] -rw------- 1 michael michael 183291935 Jun  6 09:04 HITS.pool.root.1
[2025-06-06 09:05:38] -rw------- 1 michael michael    839680 Jun  6 09:05 result.tar.gz
09:05:39 (250797): run_atlas exited; CPU time 21165.760324
09:05:39 (250797): called boinc_finish(0)

</stderr_txt>
]]>

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