Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:33 (5314): wrapper (7.7.26015): starting
13:04:33 (5314): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:04:33] Arguments: --nthreads 8
[2025-06-04 13:04:33] Threads: 8
[2025-06-04 13:04:33] Checking for CVMFS
[2025-06-04 13:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:04:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:04:34] 2.11.2.0 14280 33124 96224 146777 2 241 19214421 25165824 2934 130560 0 17571303 99.791 17831833 1911 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 13:04:34] CVMFS is ok
[2025-06-04 13:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:04:34] Checking for apptainer binary...
[2025-06-04 13:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:04:34] Running /usr/bin/apptainer --version
[2025-06-04 13:04:34] apptainer version 1.3.2-1.el7
[2025-06-04 13:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:04:35] cg-vwn302.simple-grid.lan
[2025-06-04 13:04:35] apptainer works
[2025-06-04 13:04:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:04:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:04:35] Starting ATLAS job with PandaID=6678154396
[2025-06-04 13:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:29:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:29:49] 2025-06-04 14:56:55,995 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6678154396/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:29:49] 2025-06-04 14:56:55,996 | INFO     | extracted standard info from prmon json
[2025-06-04 18:29:49] 2025-06-04 14:56:55,996 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:29:49] 2025-06-04 14:56:55,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:29:49] 2025-06-04 14:56:55,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:29:49] 2025-06-04 14:56:55,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:29:49] 2025-06-04 14:56:56,007 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:29:49] 2025-06-04 14:56:56,008 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,010 | INFO     | sum of deviations: 29642947316.000004
[2025-06-04 18:29:49] 2025-06-04 14:56:56,011 | INFO     | mean x: 1749042035.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,011 | INFO     | mean y: 2458907.368888889
[2025-06-04 18:29:49] 2025-06-04 14:56:56,011 | INFO     | -- intersect: -14676803352.314857
[2025-06-04 18:29:49] 2025-06-04 14:56:56,011 | INFO     | intersect: -14676803352.314857
[2025-06-04 18:29:49] 2025-06-04 14:56:56,011 | INFO     | chi2: 2.4595905426770526
[2025-06-04 18:29:49] 2025-06-04 14:56:56,012 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,014 | INFO     | sum of deviations: 43544311736.00001
[2025-06-04 18:29:49] 2025-06-04 14:56:56,014 | INFO     | mean x: 1749041882.5
[2025-06-04 18:29:49] 2025-06-04 14:56:56,014 | INFO     | mean y: 2467935.4545454546
[2025-06-04 18:29:49] 2025-06-04 14:56:56,014 | INFO     | -- intersect: -23064693037.782806
[2025-06-04 18:29:49] 2025-06-04 14:56:56,014 | INFO     | intersect: -23064693037.782806
[2025-06-04 18:29:49] 2025-06-04 14:56:56,015 | INFO     | chi2: 1.6842733062948247
[2025-06-04 18:29:49] 2025-06-04 14:56:56,015 | INFO     | current chi2=1.6842733062948247 (change=31.522207575996035 %)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,015 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,017 | INFO     | sum of deviations: 42233345974.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,017 | INFO     | mean x: 1749041730.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,017 | INFO     | mean y: 2467026.7395348838
[2025-06-04 18:29:49] 2025-06-04 14:56:56,018 | INFO     | -- intersect: -23967710643.687416
[2025-06-04 18:29:49] 2025-06-04 14:56:56,018 | INFO     | intersect: -23967710643.687416
[2025-06-04 18:29:49] 2025-06-04 14:56:56,018 | INFO     | chi2: 1.6851478671432887
[2025-06-04 18:29:49] 2025-06-04 14:56:56,018 | INFO     | current chi2=1.6851478671432887 (change=-0.05192511483708371 %)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,018 | INFO     | right removable region: 214
[2025-06-04 18:29:49] 2025-06-04 14:56:56,019 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,021 | INFO     | sum of deviations: -9737744119.5
[2025-06-04 18:29:49] 2025-06-04 14:56:56,021 | INFO     | mean x: 1749042187.5
[2025-06-04 18:29:49] 2025-06-04 14:56:56,021 | INFO     | mean y: 2484771.7954545454
[2025-06-04 18:29:49] 2025-06-04 14:56:56,021 | INFO     | -- intersect: 5160957631.635545
[2025-06-04 18:29:49] 2025-06-04 14:56:56,021 | INFO     | intersect: 5160957631.635545
[2025-06-04 18:29:49] 2025-06-04 14:56:56,022 | INFO     | chi2: 0.8401251208401291
[2025-06-04 18:29:49] 2025-06-04 14:56:56,022 | INFO     | current chi2=0.8401251208401291 (change=65.84288700648014 %)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,022 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,024 | INFO     | sum of deviations: -14031200175.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,024 | INFO     | mean x: 1749042340.0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,024 | INFO     | mean y: 2487710.6139534884
[2025-06-04 18:29:49] 2025-06-04 14:56:56,024 | INFO     | -- intersect: 7966111493.35936
[2025-06-04 18:29:49] 2025-06-04 14:56:56,025 | INFO     | intersect: 7966111493.35936
[2025-06-04 18:29:49] 2025-06-04 14:56:56,025 | INFO     | chi2: 0.8102494082708379
[2025-06-04 18:29:49] 2025-06-04 14:56:56,025 | INFO     | current chi2=0.8102494082708379 (change=3.5561027551961986 %)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,025 | INFO     | left removable region: 20
[2025-06-04 18:29:49] 2025-06-04 14:56:56,026 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 18:29:49] 2025-06-04 14:56:56,027 | INFO     | sum of deviations: 1216448823.9999998
[2025-06-04 18:29:49] 2025-06-04 14:56:56,027 | INFO     | mean x: 1749042309.5
[2025-06-04 18:29:49] 2025-06-04 14:56:56,027 | INFO     | mean y: 2496437.680412371
[2025-06-04 18:29:49] 2025-06-04 14:56:56,028 | INFO     | -- intersect: -937274658.953356
[2025-06-04 18:29:49] 2025-06-04 14:56:56,028 | INFO     | intersect: -937274658.953356
[2025-06-04 18:29:49] 2025-06-04 14:56:56,028 | INFO     | chi2: 0.012700593993626441
[2025-06-04 18:29:49] 2025-06-04 14:56:56,028 | INFO     | -- intersect: -937274658.953356
[2025-06-04 18:29:49] 2025-06-04 14:56:56,028 | INFO     | current memory leak: 0.54 B/s (using 194 data points, chi2=0.01)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,029 | INFO     | ..............................
[2025-06-04 18:29:49] 2025-06-04 14:56:56,029 | INFO     | . Timing measurements:
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . get job = 0 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . initial setup = 4 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . payload setup = 18 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . stage-in = 0 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . payload execution = 13746 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . stage-out = 3 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | . log creation = 1 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,030 | INFO     | ..............................
[2025-06-04 18:29:49] 2025-06-04 14:56:56,459 | INFO     | 
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | job summary report
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | --------------------------------------------------
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | PanDA job id: 6678154396
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | task id: 45006595
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | errors: (none)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | pilot state: finished 
[2025-06-04 18:29:49] 2025-06-04 14:56:56,460 | INFO     | transexitcode: 0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | exeerrorcode: 0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | exeerrordiag: 
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | exitcode: 0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | exitmsg: OK
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | cpuconsumptiontime: 52552 s
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | nevents: 400
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | neventsw: 0
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | pid: 24360
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | pgrp: 24360
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | corecount: 8
[2025-06-04 18:29:49] 2025-06-04 14:56:56,461 | INFO     | event service: False
[2025-06-04 18:29:49] 2025-06-04 14:56:56,462 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 28: 2405474, 34: 2405502, 13769: 2435254, 13770: 2435253, 13775: 2445303, 13777: 2445359, 13868: 2445529}
[2025-06-04 18:29:49] 2025-06-04 14:56:56,462 | INFO     | --------------------------------------------------
[2025-06-04 18:29:49] 2025-06-04 14:56:56,462 | INFO     | 
[2025-06-04 18:29:49] 2025-06-04 14:56:56,462 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 18:29:49] 2025-06-04 14:56:56,906 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | job 6678154396 has completed (purged errors)
[2025-06-04 18:29:49] 2025-06-04 14:56:56,909 | INFO     | overall cleanup function is called
[2025-06-04 18:29:49] 2025-06-04 14:56:57,918 | INFO     | --- collectZombieJob: --- 10, [24360]
[2025-06-04 18:29:49] 2025-06-04 14:56:57,919 | INFO     | zombie collector waiting for pid 24360
[2025-06-04 18:29:49] 2025-06-04 14:56:57,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:29:49] 2025-06-04 14:56:57,919 | INFO     | collected zombie processes
[2025-06-04 18:29:49] 2025-06-04 14:56:57,919 | INFO     | will attempt to kill all subprocesses of pid=24360
[2025-06-04 18:29:49] 2025-06-04 14:56:58,058 | INFO     | process IDs to be killed: [24360] (in reverse order)
[2025-06-04 18:29:49] 2025-06-04 14:56:58,709 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:29:49] 2025-06-04 14:56:58,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:29:49] 2025-06-04 14:56:58,713 | INFO     | did not find any defunct processes belonging to 24360
[2025-06-04 18:29:49] 2025-06-04 14:56:58,717 | INFO     | did not find any defunct processes belonging to 24360
[2025-06-04 18:29:49] 2025-06-04 14:56:58,717 | INFO     | ready for new job
[2025-06-04 18:29:49] 2025-06-04 14:56:58,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:29:49] 2025-06-04 14:56:58,719 | INFO     | **************************************
[2025-06-04 18:29:49] 2025-06-04 14:56:58,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:29:49] 2025-06-04 14:56:58,720 | INFO     | **************************************
[2025-06-04 18:29:49] 2025-06-04 14:56:58,720 | INFO     | 
[2025-06-04 18:29:49] 2025-06-04 14:56:58,721 | INFO     | pilot is running in a VM
[2025-06-04 18:29:49] 2025-06-04 14:56:58,721 | INFO     | architecture information:
[2025-06-04 18:29:49] 2025-06-04 14:56:58,730 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:29:49] 2025-06-04 14:56:58,980 | INFO     | cat /etc/os-release:
[2025-06-04 18:29:49] NAME="CentOS Linux"
[2025-06-04 18:29:49] VERSION="7 (Core)"
[2025-06-04 18:29:49] ID="centos"
[2025-06-04 18:29:49] ID_LIKE="rhel fedora"
[2025-06-04 18:29:49] VERSION_ID="7"
[2025-06-04 18:29:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:29:49] ANSI_COLOR="0;31"
[2025-06-04 18:29:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:29:49] HOME_URL="https://www.centos.org/"
[2025-06-04 18:29:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:29:49] 
[2025-06-04 18:29:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:29:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:29:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:29:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:29:49] 
[2025-06-04 18:29:49] 2025-06-04 14:56:58,980 | INFO     | **************************************
[2025-06-04 18:29:49] 2025-06-04 14:56:59,483 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 18:29:49] 2025-06-04 14:56:59,709 | INFO     | sufficient remaining disk space (496896049152 B)
[2025-06-04 18:29:49] 2025-06-04 14:56:59,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:29:49] 2025-06-04 14:56:59,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:29:49] 2025-06-04 14:56:59,710 | INFO     | update_server=False
[2025-06-04 18:29:49] 2025-06-04 14:56:59,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:29:49] 2025-06-04 14:56:59,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:29:49] 2025-06-04 14:56:59,711 | INFO     | aborting loop
[2025-06-04 18:29:49] 2025-06-04 14:57:00,190 | INFO     | all data control threads have been joined
[2025-06-04 18:29:49] 2025-06-04 14:57:00,668 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:29:49] 2025-06-04 14:57:00,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:29:49] 2025-06-04 14:57:00,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:29:49] 2025-06-04 14:57:00,715 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:00,717 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:00,752 | INFO     | all job control threads have been joined
[2025-06-04 18:29:49] 2025-06-04 14:57:00,912 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,002 | INFO     | all payload control threads have been joined
[2025-06-04 18:29:49] 2025-06-04 14:57:01,078 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,118 | INFO     | [job] validate thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:29:49] 2025-06-04 14:57:01,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:29:49] 2025-06-04 14:57:01,197 | INFO     | [data] control thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:29:49] 2025-06-04 14:57:01,240 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,587 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,748 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,758 | INFO     | [job] control thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:01,991 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:02,008 | INFO     | [payload] control thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:02,207 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:03,144 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:05,171 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:29:49] 2025-06-04 14:57:06,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718399817536)>', '<ExcThread(monitor, started 139717827880704)>']
[2025-06-04 18:29:49] 2025-06-04 14:57:07,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:29:49] 2025-06-04 14:57:07,710 | INFO     | [monitor] control thread has ended
[2025-06-04 18:29:49] 2025-06-04 14:57:11,931 | INFO     | all workflow threads have been joined
[2025-06-04 18:29:49] 2025-06-04 14:57:11,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:29:49] 2025-06-04 14:57:11,931 | INFO     | traces error code: 0
[2025-06-04 18:29:49] 2025-06-04 14:57:11,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:29:49] 2025-06-04 14:57:12,278 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:29:49] 2025-06-04 14:57:12,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:29:49] 2025-06-04 14:57:12,497 [wrapper] pilotpid: 11783
[2025-06-04 18:29:49] 2025-06-04 14:57:12,601 [wrapper] Pilot exit status: 0
[2025-06-04 18:29:49] 2025-06-04 14:57:13,027 [wrapper] pandaids: 6678154396
[2025-06-04 18:29:49] 2025-06-04 14:57:13,924 [wrapper] cleanup supervisor_pilot 12641 11784
[2025-06-04 18:29:49] 2025-06-04 14:57:14,058 [wrapper] Test setup, not cleaning
[2025-06-04 18:29:49] 2025-06-04 14:57:14,147 [wrapper] apfmon messages muted
[2025-06-04 18:29:49] 2025-06-04 14:57:14,201 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:29:49] 2025-06-04 14:57:14,313 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:29:49]  *** Error codes and diagnostics ***
[2025-06-04 18:29:49]     "exeErrorCode": 0,
[2025-06-04 18:29:49]     "exeErrorDiag": "",
[2025-06-04 18:29:49]     "pilotErrorCode": 0,
[2025-06-04 18:29:49]     "pilotErrorDiag": "",
[2025-06-04 18:29:49]  *** Listing of results directory ***
[2025-06-04 18:29:49] total 395812
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:55 queuedata.json
[2025-06-04 18:29:49] -rwx------. 1 boinc boinc     37140 Jun  4 00:55 runpilot2-wrapper.sh
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:29:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:04 run_atlas
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:04 job.xml
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc 215917550 Jun  4 13:04 EVNT.45006593._001915.pool.root.1
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc      6391 Jun  4 13:04 init_data.xml
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:04 start_atlas.sh
[2025-06-04 18:29:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:04 shared
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc    508875 Jun  4 13:04 input.tar.gz
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:04 boinc_lockfile
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc      2525 Jun  4 13:04 pandaJob.out
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc    986812 Jun  4 13:05 agis_schedconf.cvmfs.json
[2025-06-04 18:29:49] drwx------. 4 boinc boinc      4096 Jun  4 13:05 pilot3
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc 182422697 Jun  4 16:54 HITS.45006595._047716.pool.root.1
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:54 boinc_task_state.xml
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc      1014 Jun  4 16:55 memory_monitor_summary.json
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc   1598969 Jun  4 16:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc    378900 Jun  4 16:55 log.45006595._047716.job.log.tgz.1
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc        95 Jun  4 16:56 pilot_heartbeat.json
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc      7680 Jun  4 16:56 heartbeat.json
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc      4416 Jun  4 16:57 pilotlog.txt
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc   1196474 Jun  4 16:57 log.45006595._047716.job.log.1
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc       357 Jun  4 16:57 output.list
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:57 runtime_log
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc   1597440 Jun  4 16:57 result.tar.gz
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc       657 Jun  4 16:57 XAWKDm4ipg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwCaKDm6OyjIo.diag
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc      8659 Jun  4 16:57 runtime_log.err
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:29 boinc_mmap_file
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:29 wrapper_checkpoint.txt
[2025-06-04 18:29:49] -rw-r--r--. 1 boinc boinc     20529 Jun  4 18:29 stderr.txt
[2025-06-04 18:29:49] HITS file was successfully produced:
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc 182422697 Jun  4 16:54 shared/HITS.pool.root.1
[2025-06-04 18:29:49]  *** Contents of shared directory: ***
[2025-06-04 18:29:49] total 391084
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc 215917550 Jun  4 13:04 ATLAS.root_0
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:04 start_atlas.sh
[2025-06-04 18:29:49] -rw-r--r--. 2 boinc boinc    508875 Jun  4 13:04 input.tar.gz
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc 182422697 Jun  4 16:54 HITS.pool.root.1
[2025-06-04 18:29:49] -rw-------. 1 boinc boinc   1597440 Jun  4 16:57 result.tar.gz
18:29:51 (5314): run_atlas exited; CPU time 52742.512487
18:29:51 (5314): called boinc_finish(0)

</stderr_txt>
]]>

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