Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:43:12 (1942969): wrapper (7.7.26015): starting
13:43:12 (1942969): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 13:43:12] Arguments: --nthreads 3
[2025-06-04 13:43:12] Threads: 3
[2025-06-04 13:43:12] Checking for CVMFS
[2025-06-04 13:43:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:43:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:43:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:43:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:43:12] 2.9.2.0 1595201 1171 62800 146779 3 55 29390043 36864001 0 130560 0 930016 99.991 306929 38724 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:43:12] CVMFS is ok
[2025-06-04 13:43:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:43:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:43:12] Further information can be found at the LHC@home message board.
[2025-06-04 13:43:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:43:12] Checking for apptainer binary...
[2025-06-04 13:43:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:43:12] Running /usr/bin/apptainer --version
[2025-06-04 13:43:12] apptainer version 1.3.6-6.1
[2025-06-04 13:43:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:43:12] thA389a
[2025-06-04 13:43:12] apptainer works
[2025-06-04 13:43:12] Set ATHENA_PROC_NUMBER=3
[2025-06-04 13:43:12] Set ATHENA_CORE_NUMBER=3
[2025-06-04 13:43:12] Starting ATLAS job with PandaID=6678153253
[2025-06-04 13:43:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:03:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:03:27]  is_tar=False
[2025-06-04 15:03:27]  lfn=log.45006595._047271.job.log.tgz.1
[2025-06-04 15:03:27]  mtime=0
[2025-06-04 15:03:27]  protocol_id=None
[2025-06-04 15:03:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 15:03:27]  replicas=None
[2025-06-04 15:03:27]  scope=mc23_13p6TeV
[2025-06-04 15:03:27]  status=None
[2025-06-04 15:03:27]  status_code=0
[2025-06-04 15:03:27]  storage_token=
[2025-06-04 15:03:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678153253/log.45006595._047271.job.log.tgz.1
[2025-06-04 15:03:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/8f/log.45006595._047271.job.log.tgz.1
[2025-06-04 15:03:27]  workdir=None
[2025-06-04 15:03:27] ]
[2025-06-04 15:03:27] 2025-06-04 13:02:58,088 | INFO     | transferring file log.45006595._047271.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678153253/log.45006595._047271.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 15:03:27] 2025-06-04 13:02:58,088 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678153253/log.45006595._047271.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0472
[2025-06-04 15:03:27] 2025-06-04 13:02:58,100 | INFO     | adding to output.list: log.45006595._047271.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/8f/log.45006595._047271.job.log.tg
[2025-06-04 15:03:27] 2025-06-04 13:02:58,101 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:03:27] 2025-06-04 13:02:58,101 | INFO     | summary of transferred files:
[2025-06-04 15:03:27] 2025-06-04 13:02:58,101 | INFO     |  -- lfn=log.45006595._047271.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:03:27] 2025-06-04 13:02:58,101 | INFO     | stage-out finished correctly
[2025-06-04 15:03:27] 2025-06-04 13:03:00,472 | WARNING  | process 1953124 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:03:27] 2025-06-04 13:03:00,472 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678153253/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:03:27] 2025-06-04 13:03:00,505 | INFO     | number of running child processes to parent process 1953124: 1
[2025-06-04 15:03:27] 2025-06-04 13:03:00,505 | INFO     | maximum number of monitored processes: 6
[2025-06-04 15:03:27] 2025-06-04 13:03:01,285 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:03:27] 2025-06-04 13:03:02,250 | INFO     | job 6678153253 has state=finished
[2025-06-04 15:03:27] 2025-06-04 13:03:02,251 | INFO     | preparing for final server update for job 6678153253 in state='finished'
[2025-06-04 15:03:27] 2025-06-04 13:03:02,252 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:03:27] 2025-06-04 13:03:02,252 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:03:27] 2025-06-04 13:03:02,252 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:03:27] 2025-06-04 13:03:02,252 | INFO     | job 6678153253 has finished - writing final server update
[2025-06-04 15:03:27] 2025-06-04 13:03:02,253 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:03:27] 2025-06-04 13:03:02,256 | INFO     | executing command: lscpu
[2025-06-04 15:03:27] 2025-06-04 13:03:02,273 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:03:27] 2025-06-04 13:03:03,008 | INFO     | monitor loop #368: job 0:6678153253 is in state 'finished'
[2025-06-04 15:03:27] 2025-06-04 13:03:03,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:03:27] 2025-06-04 13:03:05,511 | INFO     | monitor loop #369: job 0:6678153253 is in state 'finished'
[2025-06-04 15:03:27] 2025-06-04 13:03:05,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,767 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678153253/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | INFO     | extracted standard info from prmon json
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:03:27] 2025-06-04 13:03:07,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | sum of square deviations: 110960220.0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | sum of deviations: -11388092623.0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | mean x: 1749039865.0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | mean y: 2456961.7887323946
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | -- intersect: 179510284036.56757
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | intersect: 179510284036.56757
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | chi2: 0.08131517640626308
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | -- intersect: 179510284036.56757
[2025-06-04 15:03:27] 2025-06-04 13:03:07,769 | INFO     | current memory leak: -102.63 B/s (using 71 data points, chi2=0.08)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | ..............................
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . Timing measurements:
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . get job = 0 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . initial setup = 1 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . payload setup = 4 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . stage-in = 0 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . payload execution = 4752 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . stage-out = 0 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | . log creation = 0 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,770 | INFO     | ..............................
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | 
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | job summary report
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | --------------------------------------------------
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | PanDA job id: 6678153253
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | task id: 45006595
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | errors: (none)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | pilot state: finished 
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | transexitcode: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | exeerrorcode: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | exeerrordiag: 
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | exitcode: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | exitmsg: OK
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | cpuconsumptiontime: 13665 s
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | nevents: 400
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | neventsw: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | pid: 1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:07,802 | INFO     | pgrp: 1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | corecount: 3
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | event service: False
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | sizes: {0: 2397345, 5: 2397551, 11: 2397607, 4761: 2432724, 4765: 2432724, 4771: 2432894}
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | --------------------------------------------------
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | 
[2025-06-04 15:03:27] 2025-06-04 13:03:07,803 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 15:03:27] 2025-06-04 13:03:07,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | job 6678153253 has completed (purged errors)
[2025-06-04 15:03:27] 2025-06-04 13:03:07,815 | INFO     | overall cleanup function is called
[2025-06-04 15:03:27] 2025-06-04 13:03:08,821 | INFO     | --- collectZombieJob: --- 10, [1953124]
[2025-06-04 15:03:27] 2025-06-04 13:03:08,822 | INFO     | zombie collector waiting for pid 1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:08,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:03:27] 2025-06-04 13:03:08,822 | INFO     | collected zombie processes
[2025-06-04 15:03:27] 2025-06-04 13:03:08,822 | INFO     | will attempt to kill all subprocesses of pid=1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:08,895 | INFO     | process IDs to be killed: [1953124] (in reverse order)
[2025-06-04 15:03:27] 2025-06-04 13:03:08,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:03:27] 2025-06-04 13:03:08,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:03:27] 2025-06-04 13:03:08,921 | INFO     | did not find any defunct processes belonging to 1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:08,922 | INFO     | did not find any defunct processes belonging to 1953124
[2025-06-04 15:03:27] 2025-06-04 13:03:08,922 | INFO     | ready for new job
[2025-06-04 15:03:27] 2025-06-04 13:03:08,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | **************************************
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | **************************************
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | 
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | architecture information:
[2025-06-04 15:03:27] 2025-06-04 13:03:08,923 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:03:27] 2025-06-04 13:03:08,933 | INFO     | cat /etc/os-release:
[2025-06-04 15:03:27] NAME="CentOS Linux"
[2025-06-04 15:03:27] VERSION="7 (Core)"
[2025-06-04 15:03:27] ID="centos"
[2025-06-04 15:03:27] ID_LIKE="rhel fedora"
[2025-06-04 15:03:27] VERSION_ID="7"
[2025-06-04 15:03:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:03:27] ANSI_COLOR="0;31"
[2025-06-04 15:03:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:03:27] HOME_URL="https://www.centos.org/"
[2025-06-04 15:03:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:03:27] 
[2025-06-04 15:03:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:03:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:03:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:03:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:03:27] 
[2025-06-04 15:03:27] 2025-06-04 13:03:08,933 | INFO     | **************************************
[2025-06-04 15:03:27] 2025-06-04 13:03:09,437 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | INFO     | sufficient remaining disk space (226232369152 B)
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | INFO     | update_server=False
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:03:27] 2025-06-04 13:03:09,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | INFO     | aborting loop
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:03:27] 2025-06-04 13:03:09,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:03:27] 2025-06-04 13:03:09,713 | INFO     | all data control threads have been joined
[2025-06-04 15:03:27] 2025-06-04 13:03:10,279 | INFO     | all job control threads have been joined
[2025-06-04 15:03:27] 2025-06-04 13:03:10,456 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:10,457 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:10,458 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:10,714 | INFO     | all payload control threads have been joined
[2025-06-04 15:03:27] 2025-06-04 13:03:10,719 | INFO     | [data] control thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:10,726 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,237 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,285 | INFO     | [job] control thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,342 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,453 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,456 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,481 | INFO     | [job] validate thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,709 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,720 | INFO     | [payload] control thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:11,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:03:27] 2025-06-04 13:03:11,899 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:15,834 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:20,307 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:03:27] 2025-06-04 13:03:21,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:03:27] 2025-06-04 13:03:22,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589621126976)>', '<ExcThread(monitor, started 140589270017792)>']
[2025-06-04 15:03:27] 2025-06-04 13:03:22,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:03:27] 2025-06-04 13:03:22,519 | INFO     | [monitor] control thread has ended
[2025-06-04 15:03:27] 2025-06-04 13:03:27,179 | INFO     | all workflow threads have been joined
[2025-06-04 15:03:27] 2025-06-04 13:03:27,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:03:27] 2025-06-04 13:03:27,182 | INFO     | traces error code: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:27,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:03:27] 2025-06-04 13:03:27,231 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:03:27] 2025-06-04 13:03:27,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:03:27] 2025-06-04 13:03:27,237 [wrapper] pilotpid: 1946621
[2025-06-04 15:03:27] 2025-06-04 13:03:27,240 [wrapper] Pilot exit status: 0
[2025-06-04 15:03:27] 2025-06-04 13:03:27,249 [wrapper] pandaids: 6678153253
[2025-06-04 15:03:27] 2025-06-04 13:03:27,266 [wrapper] cleanup supervisor_pilot 1965372 1946622
[2025-06-04 15:03:27] 2025-06-04 13:03:27,268 [wrapper] Test setup, not cleaning
[2025-06-04 15:03:27] 2025-06-04 13:03:27,271 [wrapper] apfmon messages muted
[2025-06-04 15:03:27] 2025-06-04 13:03:27,273 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:03:27] 2025-06-04 13:03:27,275 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:03:27]  *** Error codes and diagnostics ***
[2025-06-04 15:03:27]     "exeErrorCode": 0,
[2025-06-04 15:03:27]     "exeErrorDiag": "",
[2025-06-04 15:03:27]     "pilotErrorCode": 0,
[2025-06-04 15:03:27]     "pilotErrorDiag": "",
[2025-06-04 15:03:27]  *** Listing of results directory ***
[2025-06-04 15:03:27] total 386620
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 15:03:27] -rwx------ 1 boinc boinc     37140 Jun  4 00:36 runpilot2-wrapper.sh
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:36 queuedata.json
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:03:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:43 run_atlas
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:43 job.xml
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc 213241969 Jun  4 13:43 EVNT.45006593._001895.pool.root.1
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc      6680 Jun  4 13:43 init_data.xml
[2025-06-04 15:03:27] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:43 shared
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc    508876 Jun  4 13:43 input.tar.gz
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:43 start_atlas.sh
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:43 boinc_lockfile
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc      2525 Jun  4 13:43 pandaJob.out
[2025-06-04 15:03:27] -rw------- 1 boinc boinc    986812 Jun  4 13:43 agis_schedconf.cvmfs.json
[2025-06-04 15:03:27] -rw------- 1 boinc boinc   1598969 Jun  4 13:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:03:27] drwx------ 4 boinc boinc      4096 Jun  4 13:43 pilot3
[2025-06-04 15:03:27] -rw------- 1 boinc boinc 177430188 Jun  4 15:02 HITS.45006595._047271.pool.root.1
[2025-06-04 15:03:27] -rw------- 1 boinc boinc        95 Jun  4 15:02 pilot_heartbeat.json
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc       529 Jun  4 15:02 boinc_task_state.xml
[2025-06-04 15:03:27] -rw------- 1 boinc boinc      1023 Jun  4 15:02 memory_monitor_summary.json
[2025-06-04 15:03:27] -rw------- 1 boinc boinc    230568 Jun  4 15:02 log.45006595._047271.job.log.tgz.1
[2025-06-04 15:03:27] -rw------- 1 boinc boinc      7665 Jun  4 15:03 heartbeat.json
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc      8192 Jun  4 15:03 boinc_mmap_file
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc        27 Jun  4 15:03 wrapper_checkpoint.txt
[2025-06-04 15:03:27] -rw------- 1 boinc boinc      4552 Jun  4 15:03 pilotlog.txt
[2025-06-04 15:03:27] -rw------- 1 boinc boinc    466376 Jun  4 15:03 log.45006595._047271.job.log.1
[2025-06-04 15:03:27] -rw------- 1 boinc boinc       357 Jun  4 15:03 output.list
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc       620 Jun  4 15:03 runtime_log
[2025-06-04 15:03:27] -rw------- 1 boinc boinc    716800 Jun  4 15:03 result.tar.gz
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc      8738 Jun  4 15:03 runtime_log.err
[2025-06-04 15:03:27] -rw------- 1 boinc boinc       659 Jun  4 15:03 mPsMDmBQpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8NmKDm2fHoGm.diag
[2025-06-04 15:03:27] -rw-r--r-- 1 boinc boinc     21481 Jun  4 15:03 stderr.txt
[2025-06-04 15:03:27] HITS file was successfully produced:
[2025-06-04 15:03:27] -rw------- 1 boinc boinc 177430188 Jun  4 15:02 shared/HITS.pool.root.1
[2025-06-04 15:03:27]  *** Contents of shared directory: ***
[2025-06-04 15:03:27] total 382744
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc 213241969 Jun  4 13:43 ATLAS.root_0
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc    508876 Jun  4 13:43 input.tar.gz
[2025-06-04 15:03:27] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:43 start_atlas.sh
[2025-06-04 15:03:27] -rw------- 1 boinc boinc 177430188 Jun  4 15:02 HITS.pool.root.1
[2025-06-04 15:03:27] -rw------- 1 boinc boinc    716800 Jun  4 15:03 result.tar.gz
15:03:29 (1942969): run_atlas exited; CPU time 13687.285731
15:03:29 (1942969): called boinc_finish(0)

</stderr_txt>
]]>

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