Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:32:22 (30943): wrapper (7.7.26015): starting
15:32:22 (30943): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:32:22] Arguments: --nthreads 8
[2025-06-04 15:32:22] Threads: 8
[2025-06-04 15:32:22] Checking for CVMFS
[2025-06-04 15:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:32:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:32:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:32:24] 2.11.2.0 13342 33260 99300 146781 1 16 20208201 25165824 3134 130560 0 17191873 99.769 18342091 2001 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:32:24] CVMFS is ok
[2025-06-04 15:32:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:32:24] Checking for apptainer binary...
[2025-06-04 15:32:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:32:24] Running /usr/bin/apptainer --version
[2025-06-04 15:32:24] apptainer version 1.3.2-1.el7
[2025-06-04 15:32:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:43:52] cg-vwn278.simple-grid.lan
[2025-06-04 15:43:52] apptainer works
[2025-06-04 15:43:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:43:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:43:52] Starting ATLAS job with PandaID=6667435949
[2025-06-04 15:43:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:53:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:53:40] 2025-06-04 19:24:06,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:53:40] 2025-06-04 19:24:06,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:53:40] 2025-06-04 19:24:06,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:53:40] 2025-06-04 19:24:06,073 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:53:40] 2025-06-04 19:24:06,074 | INFO     | sum of square deviations: 10352419220.5
[2025-06-04 21:53:40] 2025-06-04 19:24:06,077 | INFO     | sum of deviations: 121004418756.00003
[2025-06-04 21:53:40] 2025-06-04 19:24:06,078 | INFO     | mean x: 1749055114.5
[2025-06-04 21:53:40] 2025-06-04 19:24:06,078 | INFO     | mean y: 2460276.50310559
[2025-06-04 21:53:40] 2025-06-04 19:24:06,078 | INFO     | -- intersect: -20441398593.043297
[2025-06-04 21:53:40] 2025-06-04 19:24:06,078 | INFO     | intersect: -20441398593.043297
[2025-06-04 21:53:40] 2025-06-04 19:24:06,078 | INFO     | chi2: 7.8412703172346845
[2025-06-04 21:53:40] 2025-06-04 19:24:06,079 | INFO     | sum of square deviations: 9877610318.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,089 | INFO     | sum of deviations: 140352318480.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,089 | INFO     | mean x: 1749054962.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,089 | INFO     | mean y: 2466404.1419558357
[2025-06-04 21:53:40] 2025-06-04 19:24:06,089 | INFO     | -- intersect: -24850095213.75283
[2025-06-04 21:53:40] 2025-06-04 19:24:06,089 | INFO     | intersect: -24850095213.75283
[2025-06-04 21:53:40] 2025-06-04 19:24:06,090 | INFO     | chi2: 7.12541472118062
[2025-06-04 21:53:40] 2025-06-04 19:24:06,090 | INFO     | current chi2=7.12541472118062 (change=9.12933194613445 %)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,090 | INFO     | right removable region: 316
[2025-06-04 21:53:40] 2025-06-04 19:24:06,091 | INFO     | sum of square deviations: 9877610318.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,094 | INFO     | sum of deviations: 2398849338.999996
[2025-06-04 21:53:40] 2025-06-04 19:24:06,094 | INFO     | mean x: 1749055267.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,094 | INFO     | mean y: 2498366.094637224
[2025-06-04 21:53:40] 2025-06-04 19:24:06,094 | INFO     | -- intersect: -422272396.87740856
[2025-06-04 21:53:40] 2025-06-04 19:24:06,094 | INFO     | intersect: -422272396.87740856
[2025-06-04 21:53:40] 2025-06-04 19:24:06,095 | INFO     | chi2: 2.564641231563345
[2025-06-04 21:53:40] 2025-06-04 19:24:06,095 | INFO     | current chi2=2.564641231563345 (change=67.2930389107183 %)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,095 | INFO     | sum of square deviations: 9417545878.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,098 | INFO     | sum of deviations: -58864321130.999985
[2025-06-04 21:53:40] 2025-06-04 19:24:06,099 | INFO     | mean x: 1749055419.5
[2025-06-04 21:53:40] 2025-06-04 19:24:06,099 | INFO     | mean y: 2518601.294871795
[2025-06-04 21:53:40] 2025-06-04 19:24:06,099 | INFO     | -- intersect: 10934980329.979204
[2025-06-04 21:53:40] 2025-06-04 19:24:06,099 | INFO     | intersect: 10934980329.979204
[2025-06-04 21:53:40] 2025-06-04 19:24:06,100 | INFO     | chi2: 1.0002302653659663
[2025-06-04 21:53:40] 2025-06-04 19:24:06,100 | INFO     | current chi2=1.0002302653659663 (change=60.99921294814988 %)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,101 | INFO     | sum of square deviations: 8971993338.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,108 | INFO     | sum of deviations: -65355222184.99999
[2025-06-04 21:53:40] 2025-06-04 19:24:06,108 | INFO     | mean x: 1749055572.0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,109 | INFO     | mean y: 2520814.035830619
[2025-06-04 21:53:40] 2025-06-04 19:24:06,109 | INFO     | -- intersect: 12743269855.592047
[2025-06-04 21:53:40] 2025-06-04 19:24:06,109 | INFO     | intersect: 12743269855.592047
[2025-06-04 21:53:40] 2025-06-04 19:24:06,109 | INFO     | chi2: 0.9676475478840294
[2025-06-04 21:53:40] 2025-06-04 19:24:06,109 | INFO     | current chi2=0.9676475478840294 (change=3.257521653777936 %)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,110 | INFO     | left removable region: 30
[2025-06-04 21:53:40] 2025-06-04 19:24:06,110 | INFO     | sum of square deviations: 7253894147.5
[2025-06-04 21:53:40] 2025-06-04 19:24:06,113 | INFO     | sum of deviations: -13133316348.000004
[2025-06-04 21:53:40] 2025-06-04 19:24:06,113 | INFO     | mean x: 1749055846.5
[2025-06-04 21:53:40] 2025-06-04 19:24:06,113 | INFO     | mean y: 2516529.5734265735
[2025-06-04 21:53:40] 2025-06-04 19:24:06,113 | INFO     | -- intersect: 3169216136.0627475
[2025-06-04 21:53:40] 2025-06-04 19:24:06,114 | INFO     | intersect: 3169216136.0627475
[2025-06-04 21:53:40] 2025-06-04 19:24:06,114 | INFO     | chi2: 0.09493284797697436
[2025-06-04 21:53:40] 2025-06-04 19:24:06,114 | INFO     | -- intersect: 3169216136.0627475
[2025-06-04 21:53:40] 2025-06-04 19:24:06,114 | INFO     | current memory leak: -1.81 B/s (using 286 data points, chi2=0.09)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,115 | INFO     | ..............................
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . Timing measurements:
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . get job = 0 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . initial setup = 10 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . payload setup = 160 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . stage-in = 0 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . payload execution = 19781 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . stage-out = 3 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | . log creation = 1 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,116 | INFO     | ..............................
[2025-06-04 21:53:40] 2025-06-04 19:24:06,308 | INFO     | 
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | job summary report
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | --------------------------------------------------
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | PanDA job id: 6667435949
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | task id: 44871837
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | errors: (none)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | pilot state: finished 
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | transexitcode: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | exeerrorcode: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | exeerrordiag: 
[2025-06-04 21:53:40] 2025-06-04 19:24:06,309 | INFO     | exitcode: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | exitmsg: OK
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | cpuconsumptiontime: 73560 s
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | nevents: 400
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | neventsw: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | pid: 19290
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | pgrp: 19290
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | corecount: 8
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | event service: False
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | sizes: {0: 2396558, 1: 2397414, 12: 2397414, 23: 2397442, 34: 2397470, 44: 2397498, 55: 2397654, 66: 2397682, 77: 2397710, 87: 2397766, 92: 2398000, 98: 2398308, 1
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | --------------------------------------------------
[2025-06-04 21:53:40] 2025-06-04 19:24:06,310 | INFO     | 
[2025-06-04 21:53:40] 2025-06-04 19:24:06,311 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:53:40] 2025-06-04 19:24:06,790 | INFO     | job 6667435949 has completed (purged errors)
[2025-06-04 21:53:40] 2025-06-04 19:24:06,790 | INFO     | overall cleanup function is called
[2025-06-04 21:53:40] 2025-06-04 19:24:07,074 | INFO     | PID=12658 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 21:53:40] 2025-06-04 19:24:07,075 | INFO     | .. there are 9 such processes running
[2025-06-04 21:53:40] 2025-06-04 19:24:07,799 | INFO     | --- collectZombieJob: --- 10, [19290]
[2025-06-04 21:53:40] 2025-06-04 19:24:07,799 | INFO     | zombie collector waiting for pid 19290
[2025-06-04 21:53:40] 2025-06-04 19:24:07,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:53:40] 2025-06-04 19:24:07,800 | INFO     | collected zombie processes
[2025-06-04 21:53:40] 2025-06-04 19:24:07,800 | INFO     | will attempt to kill all subprocesses of pid=19290
[2025-06-04 21:53:40] 2025-06-04 19:24:07,915 | INFO     | process IDs to be killed: [19290] (in reverse order)
[2025-06-04 21:53:40] 2025-06-04 19:24:08,643 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:53:40] 2025-06-04 19:24:08,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:53:40] 2025-06-04 19:24:08,647 | INFO     | did not find any defunct processes belonging to 19290
[2025-06-04 21:53:40] 2025-06-04 19:24:08,650 | INFO     | did not find any defunct processes belonging to 19290
[2025-06-04 21:53:40] 2025-06-04 19:24:08,651 | INFO     | ready for new job
[2025-06-04 21:53:40] 2025-06-04 19:24:08,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:53:40] 2025-06-04 19:24:08,653 | INFO     | **************************************
[2025-06-04 21:53:40] 2025-06-04 19:24:08,654 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:53:40] 2025-06-04 19:24:08,654 | INFO     | **************************************
[2025-06-04 21:53:40] 2025-06-04 19:24:08,654 | INFO     | 
[2025-06-04 21:53:40] 2025-06-04 19:24:08,655 | INFO     | pilot is running in a VM
[2025-06-04 21:53:40] 2025-06-04 19:24:08,655 | INFO     | architecture information:
[2025-06-04 21:53:40] 2025-06-04 19:24:08,665 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:53:40] 2025-06-04 19:24:08,896 | INFO     | cat /etc/os-release:
[2025-06-04 21:53:40] NAME="CentOS Linux"
[2025-06-04 21:53:40] VERSION="7 (Core)"
[2025-06-04 21:53:40] ID="centos"
[2025-06-04 21:53:40] ID_LIKE="rhel fedora"
[2025-06-04 21:53:40] VERSION_ID="7"
[2025-06-04 21:53:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:53:40] ANSI_COLOR="0;31"
[2025-06-04 21:53:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:53:40] HOME_URL="https://www.centos.org/"
[2025-06-04 21:53:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:53:40] 
[2025-06-04 21:53:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:53:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:53:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:53:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:53:40] 
[2025-06-04 21:53:40] 2025-06-04 19:24:08,897 | INFO     | **************************************
[2025-06-04 21:53:40] 2025-06-04 19:24:09,400 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 21:53:40] 2025-06-04 19:24:09,618 | INFO     | sufficient remaining disk space (496897097728 B)
[2025-06-04 21:53:40] 2025-06-04 19:24:09,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:53:40] 2025-06-04 19:24:09,619 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:53:40] 2025-06-04 19:24:09,619 | INFO     | update_server=False
[2025-06-04 21:53:40] 2025-06-04 19:24:09,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:53:40] 2025-06-04 19:24:09,620 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:53:40] 2025-06-04 19:24:09,621 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:53:40] 2025-06-04 19:24:09,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:53:40] 2025-06-04 19:24:09,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:53:40] 2025-06-04 19:24:09,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:53:40] 2025-06-04 19:24:09,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:53:40] 2025-06-04 19:24:10,144 | INFO     | all data control threads have been joined
[2025-06-04 21:53:40] 2025-06-04 19:24:10,185 | INFO     | all payload control threads have been joined
[2025-06-04 21:53:40] 2025-06-04 19:24:10,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:53:40] 2025-06-04 19:24:10,379 | INFO     | aborting loop
[2025-06-04 21:53:40] 2025-06-04 19:24:10,625 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:10,790 | INFO     | all job control threads have been joined
[2025-06-04 21:53:40] 2025-06-04 19:24:10,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:10,923 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,150 | INFO     | [data] control thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,191 | INFO     | [payload] control thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,210 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:53:40] 2025-06-04 19:24:11,385 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,628 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,733 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,750 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:11,796 | INFO     | [job] control thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:12,022 | INFO     | [job] validate thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:12,060 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:12,061 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:12,328 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:13,637 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:53:40] 2025-06-04 19:24:14,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863499827008)>', '<ExcThread(monitor, started 139862766241536)>']
[2025-06-04 21:53:40] 2025-06-04 19:24:14,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:53:40] 2025-06-04 19:24:14,650 | INFO     | [monitor] control thread has ended
[2025-06-04 21:53:40] 2025-06-04 19:24:19,443 | INFO     | all workflow threads have been joined
[2025-06-04 21:53:40] 2025-06-04 19:24:19,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:53:40] 2025-06-04 19:24:19,443 | INFO     | traces error code: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:19,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:53:40] 2025-06-04 19:24:19,849 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:53:40] 2025-06-04 19:24:19,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:53:40] 2025-06-04 19:24:20,026 [wrapper] pilotpid: 12658
[2025-06-04 21:53:40] 2025-06-04 19:24:20,148 [wrapper] Pilot exit status: 0
[2025-06-04 21:53:40] 2025-06-04 19:24:20,353 [wrapper] pandaids: 6667435949
[2025-06-04 21:53:40] 2025-06-04 19:24:20,683 [wrapper] cleanup supervisor_pilot 17781 12659
[2025-06-04 21:53:40] 2025-06-04 19:24:20,767 [wrapper] Test setup, not cleaning
[2025-06-04 21:53:40] 2025-06-04 19:24:20,861 [wrapper] apfmon messages muted
[2025-06-04 21:53:40] 2025-06-04 19:24:20,964 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:53:40] 2025-06-04 19:24:21,061 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:53:40]  *** Error codes and diagnostics ***
[2025-06-04 21:53:40]     "exeErrorCode": 0,
[2025-06-04 21:53:40]     "exeErrorDiag": "",
[2025-06-04 21:53:40]     "pilotErrorCode": 0,
[2025-06-04 21:53:40]     "pilotErrorDiag": "",
[2025-06-04 21:53:40]  *** Listing of results directory ***
[2025-06-04 21:53:40] total 420172
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc    495897 May 27 21:34 pilot3.tar.gz
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc      5111 May 27 21:52 queuedata.json
[2025-06-04 21:53:40] -rwx------. 1 boinc boinc     37140 May 27 21:53 runpilot2-wrapper.sh
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:53:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:32 run_atlas
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:32 job.xml
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc      6391 Jun  4 15:32 init_data.xml
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc 221813724 Jun  4 15:32 EVNT.44871834._002851.pool.root.1
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:32 start_atlas.sh
[2025-06-04 21:53:40] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:32 shared
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:32 input.tar.gz
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:32 boinc_lockfile
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc      2556 Jun  4 15:43 pandaJob.out
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc    986819 Jun  4 15:46 agis_schedconf.cvmfs.json
[2025-06-04 21:53:40] drwx------. 4 boinc boinc      4096 Jun  4 15:47 pilot3
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc 200385948 Jun  4 21:21 HITS.44871837._072608.pool.root.1
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:21 boinc_task_state.xml
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc      1030 Jun  4 21:22 memory_monitor_summary.json
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc   1598969 Jun  4 21:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc    420441 Jun  4 21:22 log.44871837._072608.job.log.tgz.1
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc        95 Jun  4 21:23 pilot_heartbeat.json
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc      7688 Jun  4 21:24 heartbeat.json
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc      4539 Jun  4 21:24 pilotlog.txt
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc   1703457 Jun  4 21:24 log.44871837._072608.job.log.1
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc       357 Jun  4 21:24 output.list
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:24 runtime_log
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc   2140160 Jun  4 21:24 result.tar.gz
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc       657 Jun  4 21:24 tI3MDmfXFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMHaKDmcmWTYm.diag
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc      8659 Jun  4 21:24 runtime_log.err
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:53 boinc_mmap_file
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:53 wrapper_checkpoint.txt
[2025-06-04 21:53:40] -rw-r--r--. 1 boinc boinc     20386 Jun  4 21:53 stderr.txt
[2025-06-04 21:53:40] HITS file was successfully produced:
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc 200385948 Jun  4 21:21 shared/HITS.pool.root.1
[2025-06-04 21:53:40]  *** Contents of shared directory: ***
[2025-06-04 21:53:40] total 414916
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc 221813724 Jun  4 15:32 ATLAS.root_0
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:32 start_atlas.sh
[2025-06-04 21:53:40] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:32 input.tar.gz
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc 200385948 Jun  4 21:21 HITS.pool.root.1
[2025-06-04 21:53:40] -rw-------. 1 boinc boinc   2140160 Jun  4 21:24 result.tar.gz
21:53:42 (30943): run_atlas exited; CPU time 73843.144058
21:53:42 (30943): called boinc_finish(0)

</stderr_txt>
]]>

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