Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:43 (2673864): wrapper (7.7.26015): starting
23:47:43 (2673864): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:47:43] Arguments: --nthreads 8
[2025-06-03 23:47:43] Threads: 8
[2025-06-03 23:47:43] Checking for CVMFS
[2025-06-03 23:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:47:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:47:43] 2.12.6.0 267692 23951 246680 146767 3 537 40565361 40960001 24874 16776704 1 309602587 99.788 171705997 36792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:47:43] CVMFS is ok
[2025-06-03 23:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:47:43] Further information can be found at the LHC@home message board.
[2025-06-03 23:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:47:43] Checking for apptainer binary...
[2025-06-03 23:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:47:43] Running /usr/bin/apptainer --version
[2025-06-03 23:47:43] apptainer version 1.4.1-1.el9
[2025-06-03 23:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:47:43] c8-16-1.aglt2.org
[2025-06-03 23:47:43] apptainer works
[2025-06-03 23:47:43] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:47:43] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:47:43] Starting ATLAS job with PandaID=6678154381
[2025-06-03 23:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:36:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:36:59]  filesize=294507
[2025-06-04 00:36:59]  filetype=log
[2025-06-04 00:36:59]  guid=472bc1f7-92ed-4506-8797-25447d027bfb
[2025-06-04 00:36:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 00:36:59]  is_altstaged=None
[2025-06-04 00:36:59]  is_tar=False
[2025-06-04 00:36:59]  lfn=log.45006595._047701.job.log.tgz.1
[2025-06-04 00:36:59]  mtime=0
[2025-06-04 00:36:59]  protocol_id=None
[2025-06-04 00:36:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:36:59]  replicas=None
[2025-06-04 00:36:59]  scope=mc23_13p6TeV
[2025-06-04 00:36:59]  status=None
[2025-06-04 00:36:59]  status_code=0
[2025-06-04 00:36:59]  storage_token=
[2025-06-04 00:36:59]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6678154381/log.45006595._047701.job.log.tgz.1
[2025-06-04 00:36:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/78/log.45006595._047701.job.log.tgz.1
[2025-06-04 00:36:59]  workdir=None
[2025-06-04 00:36:59] ]
[2025-06-04 00:36:59] 2025-06-04 04:36:38,641 | INFO     | transferring file log.45006595._047701.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6678154381/log.45006595._047701.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:36:59] 2025-06-04 04:36:38,641 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6678154381/log.45006595._047701.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._047701.job
[2025-06-04 00:36:59] 2025-06-04 04:36:38,659 | INFO     | adding to output.list: log.45006595._047701.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/78/log.45006595._047701.job.log.tg
[2025-06-04 00:36:59] 2025-06-04 04:36:38,659 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:36:59] 2025-06-04 04:36:38,659 | INFO     | summary of transferred files:
[2025-06-04 00:36:59] 2025-06-04 04:36:38,659 | INFO     |  -- lfn=log.45006595._047701.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:36:59] 2025-06-04 04:36:38,660 | INFO     | stage-out finished correctly
[2025-06-04 00:36:59] 2025-06-04 04:36:38,713 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:36:59] 2025-06-04 04:36:39,742 | INFO     | job 6678154381 has state=finished
[2025-06-04 00:36:59] 2025-06-04 04:36:39,742 | INFO     | preparing for final server update for job 6678154381 in state='finished'
[2025-06-04 00:36:59] 2025-06-04 04:36:39,742 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:36:59] 2025-06-04 04:36:39,743 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:36:59] 2025-06-04 04:36:39,743 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:36:59] 2025-06-04 04:36:39,743 | INFO     | job 6678154381 has finished - writing final server update
[2025-06-04 00:36:59] 2025-06-04 04:36:39,743 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:36:59] 2025-06-04 04:36:39,759 | INFO     | executing command: lscpu
[2025-06-04 00:36:59] 2025-06-04 04:36:39,846 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:36:59] 2025-06-04 04:36:43,475 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 00:36:59] 2025-06-04 04:36:43,476 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6678154381/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:36:59] 2025-06-04 04:36:43,476 | INFO     | extracted standard info from prmon json
[2025-06-04 00:36:59] 2025-06-04 04:36:43,477 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:36:59] 2025-06-04 04:36:43,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:36:59] 2025-06-04 04:36:43,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:36:59] 2025-06-04 04:36:43,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | sum of deviations: 3462315287.0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | mean x: 1749010423.0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | mean y: 2441973.0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | -- intersect: -283520005004.89435
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | intersect: -283520005004.89435
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | chi2: 0.7324286304075437
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | -- intersect: -283520005004.89435
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | current memory leak: 162.10 B/s (using 41 data points, chi2=0.73)
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | ..............................
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | . Timing measurements:
[2025-06-04 00:36:59] 2025-06-04 04:36:43,479 | INFO     | . get job = 0 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . initial setup = 2 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . payload setup = 5 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . stage-in = 0 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . payload execution = 2901 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . stage-out = 0 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | . log creation = 0 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,480 | INFO     | ..............................
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | 
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | job summary report
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | --------------------------------------------------
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | PanDA job id: 6678154381
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | task id: 45006595
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | errors: (none)
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | pilot state: finished 
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | transexitcode: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | exeerrorcode: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | exeerrordiag: 
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | exitcode: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | exitmsg: OK
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | cpuconsumptiontime: 18915 s
[2025-06-04 00:36:59] 2025-06-04 04:36:43,530 | INFO     | nevents: 400
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | neventsw: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | pid: 2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | pgrp: 2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | corecount: 8
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | event service: False
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 2910: 2430751, 2911: 2439748, 2916: 2439862}
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | --------------------------------------------------
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | 
[2025-06-04 00:36:59] 2025-06-04 04:36:43,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 00:36:59] 2025-06-04 04:36:43,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:36:59] 2025-06-04 04:36:43,547 | INFO     | job 6678154381 has completed (purged errors)
[2025-06-04 00:36:59] 2025-06-04 04:36:43,548 | INFO     | overall cleanup function is called
[2025-06-04 00:36:59] 2025-06-04 04:36:44,554 | INFO     | --- collectZombieJob: --- 10, [2695358]
[2025-06-04 00:36:59] 2025-06-04 04:36:44,555 | INFO     | zombie collector waiting for pid 2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:44,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:36:59] 2025-06-04 04:36:44,555 | INFO     | collected zombie processes
[2025-06-04 00:36:59] 2025-06-04 04:36:44,555 | INFO     | will attempt to kill all subprocesses of pid=2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:45,616 | WARNING  | process 2695358 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:36:59] 2025-06-04 04:36:45,618 | INFO     | process IDs to be killed: [2695358] (in reverse order)
[2025-06-04 00:36:59] 2025-06-04 04:36:45,770 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:36:59] 2025-06-04 04:36:45,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:36:59] 2025-06-04 04:36:45,830 | INFO     | did not find any defunct processes belonging to 2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:45,891 | INFO     | did not find any defunct processes belonging to 2695358
[2025-06-04 00:36:59] 2025-06-04 04:36:45,891 | INFO     | ready for new job
[2025-06-04 00:36:59] 2025-06-04 04:36:45,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:36:59] 2025-06-04 04:36:45,893 | INFO     | **************************************
[2025-06-04 00:36:59] 2025-06-04 04:36:45,893 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:36:59] 2025-06-04 04:36:45,893 | INFO     | **************************************
[2025-06-04 00:36:59] 2025-06-04 04:36:45,893 | INFO     | 
[2025-06-04 00:36:59] 2025-06-04 04:36:45,911 | INFO     | architecture information:
[2025-06-04 00:36:59] 2025-06-04 04:36:45,912 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:36:59] 2025-06-04 04:36:45,926 | INFO     | cat /etc/os-release:
[2025-06-04 00:36:59] NAME="CentOS Linux"
[2025-06-04 00:36:59] VERSION="7 (Core)"
[2025-06-04 00:36:59] ID="centos"
[2025-06-04 00:36:59] ID_LIKE="rhel fedora"
[2025-06-04 00:36:59] VERSION_ID="7"
[2025-06-04 00:36:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:36:59] ANSI_COLOR="0;31"
[2025-06-04 00:36:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:36:59] HOME_URL="https://www.centos.org/"
[2025-06-04 00:36:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:36:59] 
[2025-06-04 00:36:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:36:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:36:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:36:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:36:59] 
[2025-06-04 00:36:59] 2025-06-04 04:36:45,926 | INFO     | **************************************
[2025-06-04 00:36:59] 2025-06-04 04:36:46,013 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:36:59] 2025-06-04 04:36:46,406 | INFO     | number of running child processes to parent process 2695358: 1
[2025-06-04 00:36:59] 2025-06-04 04:36:46,407 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:36:59] 2025-06-04 04:36:46,407 | INFO     | aborting job monitoring since job object (job id=6678154381) has expired
[2025-06-04 00:36:59] 2025-06-04 04:36:46,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 00:36:59] 2025-06-04 04:36:46,445 | INFO     | sufficient remaining disk space (171997921280 B)
[2025-06-04 00:36:59] 2025-06-04 04:36:46,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:36:59] 2025-06-04 04:36:46,445 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:36:59] 2025-06-04 04:36:46,446 | INFO     | update_server=False
[2025-06-04 00:36:59] 2025-06-04 04:36:46,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:36:59] 2025-06-04 04:36:46,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:36:59] 2025-06-04 04:36:46,446 | INFO     | will abort loop
[2025-06-04 00:36:59] 2025-06-04 04:36:46,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:36:59] 2025-06-04 04:36:46,804 | INFO     | all job control threads have been joined
[2025-06-04 00:36:59] 2025-06-04 04:36:47,248 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:36:59] 2025-06-04 04:36:47,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:36:59] 2025-06-04 04:36:47,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:36:59] 2025-06-04 04:36:47,316 | INFO     | all data control threads have been joined
[2025-06-04 00:36:59] 2025-06-04 04:36:47,451 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:47,451 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:47,542 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:47,766 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:47,810 | INFO     | [job] control thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:47,905 | INFO     | all payload control threads have been joined
[2025-06-04 00:36:59] 2025-06-04 04:36:48,109 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,320 | INFO     | [data] control thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:36:59] 2025-06-04 04:36:48,612 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,727 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,752 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,773 | INFO     | [job] validate thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,907 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:48,909 | INFO     | [payload] control thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:49,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:36:59] 2025-06-04 04:36:49,545 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:53,281 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:36:59] 2025-06-04 04:36:54,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374055823168)>', '<ExcThread(monitor, started 140373405980416)>']
[2025-06-04 00:36:59] 2025-06-04 04:36:54,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:36:59] 2025-06-04 04:36:54,281 | INFO     | [monitor] control thread has ended
[2025-06-04 00:36:59] 2025-06-04 04:36:59,256 | INFO     | all workflow threads have been joined
[2025-06-04 00:36:59] 2025-06-04 04:36:59,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:36:59] 2025-06-04 04:36:59,257 | INFO     | traces error code: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:59,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:36:59] 2025-06-04 04:36:59,378 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:36:59] 2025-06-04 04:36:59,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:36:59] 2025-06-04 04:36:59,384 [wrapper] pilotpid: 2682188
[2025-06-04 00:36:59] 2025-06-04 04:36:59,386 [wrapper] Pilot exit status: 0
[2025-06-04 00:36:59] 2025-06-04 04:36:59,396 [wrapper] pandaids: 6678154381
[2025-06-04 00:36:59] 2025-06-04 04:36:59,503 [wrapper] cleanup supervisor_pilot 3291827 2682190
[2025-06-04 00:36:59] 2025-06-04 04:36:59,505 [wrapper] Test setup, not cleaning
[2025-06-04 00:36:59] 2025-06-04 04:36:59,507 [wrapper] apfmon messages muted
[2025-06-04 00:36:59] 2025-06-04 04:36:59,509 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:36:59] 2025-06-04 04:36:59,511 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:36:59]  *** Error codes and diagnostics ***
[2025-06-04 00:36:59]     "exeErrorCode": 0,
[2025-06-04 00:36:59]     "exeErrorDiag": "",
[2025-06-04 00:36:59]     "pilotErrorCode": 0,
[2025-06-04 00:36:59]     "pilotErrorDiag": "",
[2025-06-04 00:36:59]  *** Listing of results directory ***
[2025-06-04 00:36:59] total 385072
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:55 queuedata.json
[2025-06-04 00:36:59] -rwx------. 1 boincer umatlas     37140 Jun  3 18:55 runpilot2-wrapper.sh
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:36:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:47 run_atlas
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:47 job.xml
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas 215689064 Jun  3 23:47 EVNT.45006593._001914.pool.root.1
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 23:47 input.tar.gz
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:47 start_atlas.sh
[2025-06-04 00:36:59] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:47 shared
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:47 boinc_lockfile
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 23:47 pandaJob.out
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas    986077 Jun  3 23:47 agis_schedconf.cvmfs.json
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:36:59] drwx------. 4 boincer umatlas      4096 Jun  3 23:47 pilot3
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas      7161 Jun  4 00:30 init_data.xml
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas        95 Jun  4 00:35 pilot_heartbeat.json
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas 173583295 Jun  4 00:36 HITS.45006595._047701.pool.root.1
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas       529 Jun  4 00:36 boinc_task_state.xml
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas      1028 Jun  4 00:36 memory_monitor_summary.json
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas    294507 Jun  4 00:36 log.45006595._047701.job.log.tgz.1
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas      7684 Jun  4 00:36 heartbeat.json
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:36 boinc_mmap_file
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:36 wrapper_checkpoint.txt
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas      4761 Jun  4 00:36 pilotlog.txt
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas    308052 Jun  4 00:36 log.45006595._047701.job.log.1
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas       357 Jun  4 00:36 output.list
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:36 runtime_log
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas    624640 Jun  4 00:36 result.tar.gz
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 00:36 runtime_log.err
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas       651 Jun  4 00:36 5J0NDm3ipg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiCaKDmBEX4cn.diag
[2025-06-04 00:36:59] -rw-r--r--. 1 boincer umatlas     21102 Jun  4 00:36 stderr.txt
[2025-06-04 00:36:59] HITS file was successfully produced:
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas 173583295 Jun  4 00:36 shared/HITS.pool.root.1
[2025-06-04 00:36:59]  *** Contents of shared directory: ***
[2025-06-04 00:36:59] total 381284
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas 215689064 Jun  3 23:47 ATLAS.root_0
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 23:47 input.tar.gz
[2025-06-04 00:36:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:47 start_atlas.sh
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas 173583295 Jun  4 00:36 HITS.pool.root.1
[2025-06-04 00:36:59] -rw-------. 1 boincer umatlas    624640 Jun  4 00:36 result.tar.gz
00:37:00 (2673864): run_atlas exited; CPU time 18987.546291
00:37:00 (2673864): called boinc_finish(0)

</stderr_txt>
]]>

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