Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:05 (421141): wrapper (7.7.26015): starting
10:45:05 (421141): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 10:45:05] Arguments: --nthreads 4
[2025-06-06 10:45:05] Threads: 4
[2025-06-06 10:45:05] Checking for CVMFS
[2025-06-06 10:45:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 10:45:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 10:45:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 10:45:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 10:45:05] 2.13.0.0 142616 386 46920 146837 3 56 3530351 4096001 9 130560 0 702311 99.994 149546 922 http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-06-06 10:45:05] CVMFS is ok
[2025-06-06 10:45:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 10:45:05] Checking for apptainer binary...
[2025-06-06 10:45:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 10:45:05] Running /usr/bin/apptainer --version
[2025-06-06 10:45:05] apptainer version 1.4.0
[2025-06-06 10:45:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 10:45:05] Zen
[2025-06-06 10:45:05] apptainer works
[2025-06-06 10:45:05] Set ATHENA_PROC_NUMBER=4
[2025-06-06 10:45:05] Set ATHENA_CORE_NUMBER=4
[2025-06-06 10:45:05] Starting ATLAS job with PandaID=6678153358
[2025-06-06 10:45:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:17:51]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:17:51]  is_altstaged=None
[2025-06-06 12:17:51]  is_tar=False
[2025-06-06 12:17:51]  lfn=log.45006595._047376.job.log.tgz.1
[2025-06-06 12:17:51]  mtime=0
[2025-06-06 12:17:51]  protocol_id=None
[2025-06-06 12:17:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 12:17:51]  replicas=None
[2025-06-06 12:17:51]  scope=mc23_13p6TeV
[2025-06-06 12:17:51]  status=None
[2025-06-06 12:17:51]  status_code=0
[2025-06-06 12:17:51]  storage_token=
[2025-06-06 12:17:51]  surl=/home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678153358/log.45006595._047376.job.log.tgz.1
[2025-06-06 12:17:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/1c/log.45006595._047376.job.log.tgz.1
[2025-06-06 12:17:51]  workdir=None
[2025-06-06 12:17:51] ]
[2025-06-06 12:17:51] 2025-06-06 02:17:27,389 | INFO     | transferring file log.45006595._047376.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678153358/log.45006595._047376.job.log.tgz.1 to /home/mic
[2025-06-06 12:17:51] 2025-06-06 02:17:27,389 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678153358/log.45006595._047376.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/26/
[2025-06-06 12:17:51] 2025-06-06 02:17:27,420 | INFO     | adding to output.list: log.45006595._047376.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/1c/log.45006595._047376.job.log.tg
[2025-06-06 12:17:51] 2025-06-06 02:17:27,420 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 12:17:51] 2025-06-06 02:17:27,420 | INFO     | summary of transferred files:
[2025-06-06 12:17:51] 2025-06-06 02:17:27,420 | INFO     |  -- lfn=log.45006595._047376.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 12:17:51] 2025-06-06 02:17:27,420 | INFO     | stage-out finished correctly
[2025-06-06 12:17:51] 2025-06-06 02:17:27,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 12:17:51] 2025-06-06 02:17:28,909 | INFO     | job 6678153358 has state=finished
[2025-06-06 12:17:51] 2025-06-06 02:17:28,909 | INFO     | preparing for final server update for job 6678153358 in state='finished'
[2025-06-06 12:17:51] 2025-06-06 02:17:28,910 | INFO     | this job has now completed (state=finished)
[2025-06-06 12:17:51] 2025-06-06 02:17:28,910 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 12:17:51] 2025-06-06 02:17:28,910 | INFO     | log transfer has been attempted: DONE
[2025-06-06 12:17:51] 2025-06-06 02:17:28,910 | INFO     | job 6678153358 has finished - writing final server update
[2025-06-06 12:17:51] 2025-06-06 02:17:28,910 | INFO     | total number of processed events: 400 (read)
[2025-06-06 12:17:51] 2025-06-06 02:17:28,914 | INFO     | executing command: lscpu
[2025-06-06 12:17:51] 2025-06-06 02:17:28,939 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 12:17:51] 2025-06-06 02:17:31,991 | INFO     | PID=431868 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-06 12:17:51] 2025-06-06 02:17:31,991 | INFO     | .. there are 3 such processes running
[2025-06-06 12:17:51] 2025-06-06 02:17:32,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:17:51] 2025-06-06 02:17:32,768 | INFO     | using path: /home/michael/Boinc/BOINC/slots/26/PanDA_Pilot-6678153358/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:17:51] 2025-06-06 02:17:32,769 | INFO     | extracted standard info from prmon json
[2025-06-06 12:17:51] 2025-06-06 02:17:32,769 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:17:51] 2025-06-06 02:17:32,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:17:51] 2025-06-06 02:17:32,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:17:51] 2025-06-06 02:17:32,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:17:51] 2025-06-06 02:17:32,770 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:17:51] 2025-06-06 02:17:32,770 | INFO     | sum of square deviations: 183761585.0
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | sum of deviations: -4129258604.0000005
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | mean x: 1749173571.5
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | mean y: 2368038.761904762
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | -- intersect: 39307590727.202385
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | intersect: 39307590727.202385
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | chi2: 0.017008258326239766
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | -- intersect: 39307590727.202385
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | current memory leak: -22.47 B/s (using 84 data points, chi2=0.02)
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | ..............................
[2025-06-06 12:17:51] 2025-06-06 02:17:32,771 | INFO     | . Timing measurements:
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . get job = 0 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . initial setup = 4 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . payload setup = 3 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . stage-in = 0 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . payload execution = 5511 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . stage-out = 0 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | . log creation = 0 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,772 | INFO     | ..............................
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | 
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | job summary report
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | --------------------------------------------------
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | PanDA job id: 6678153358
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | task id: 45006595
[2025-06-06 12:17:51] 2025-06-06 02:17:32,826 | INFO     | errors: (none)
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | pilot state: finished 
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | transexitcode: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | exeerrorcode: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | exeerrordiag: 
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | exitcode: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | exitmsg: OK
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | cpuconsumptiontime: 21025 s
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | nevents: 400
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | neventsw: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | pid: 451491
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | pgrp: 451491
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | corecount: 4
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | event service: False
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | sizes: {0: 2397354, 2: 2397560, 10: 2397588, 5518: 2424152, 5519: 2433172, 5524: 2433286}
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | --------------------------------------------------
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | 
[2025-06-06 12:17:51] 2025-06-06 02:17:32,827 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/26
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | job 6678153358 has completed (purged errors)
[2025-06-06 12:17:51] 2025-06-06 02:17:32,848 | INFO     | overall cleanup function is called
[2025-06-06 12:17:51] 2025-06-06 02:17:32,862 | WARNING  | process 451491 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 12:17:51] 2025-06-06 02:17:32,933 | INFO     | using path: /home/michael/Boinc/BOINC/slots/26/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:17:51] 2025-06-06 02:17:33,045 | INFO     | number of running child processes to parent process 451491: 1
[2025-06-06 12:17:51] 2025-06-06 02:17:33,045 | INFO     | maximum number of monitored processes: 7
[2025-06-06 12:17:51] 2025-06-06 02:17:33,045 | INFO     | aborting job monitoring since job object (job id=6678153358) has expired
[2025-06-06 12:17:51] 2025-06-06 02:17:33,855 | INFO     | --- collectZombieJob: --- 10, [451491]
[2025-06-06 12:17:51] 2025-06-06 02:17:33,855 | INFO     | zombie collector waiting for pid 451491
[2025-06-06 12:17:51] 2025-06-06 02:17:33,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:17:51] 2025-06-06 02:17:33,856 | INFO     | collected zombie processes
[2025-06-06 12:17:51] 2025-06-06 02:17:33,856 | INFO     | will attempt to kill all subprocesses of pid=451491
[2025-06-06 12:17:51] 2025-06-06 02:17:33,960 | INFO     | process IDs to be killed: [451491] (in reverse order)
[2025-06-06 12:17:51] 2025-06-06 02:17:34,014 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:17:51] 2025-06-06 02:17:34,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:17:51] 2025-06-06 02:17:34,017 | INFO     | did not find any defunct processes belonging to 451491
[2025-06-06 12:17:51] 2025-06-06 02:17:34,020 | INFO     | did not find any defunct processes belonging to 451491
[2025-06-06 12:17:51] 2025-06-06 02:17:34,020 | INFO     | ready for new job
[2025-06-06 12:17:51] 2025-06-06 02:17:34,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:17:51] 2025-06-06 02:17:34,021 | INFO     | **************************************
[2025-06-06 12:17:51] 2025-06-06 02:17:34,021 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:17:51] 2025-06-06 02:17:34,021 | INFO     | **************************************
[2025-06-06 12:17:51] 2025-06-06 02:17:34,021 | INFO     | 
[2025-06-06 12:17:51] 2025-06-06 02:17:34,022 | INFO     | architecture information:
[2025-06-06 12:17:51] 2025-06-06 02:17:34,022 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:17:51] 2025-06-06 02:17:34,036 | INFO     | cat /etc/os-release:
[2025-06-06 12:17:51] NAME="CentOS Linux"
[2025-06-06 12:17:51] VERSION="7 (Core)"
[2025-06-06 12:17:51] ID="centos"
[2025-06-06 12:17:51] ID_LIKE="rhel fedora"
[2025-06-06 12:17:51] VERSION_ID="7"
[2025-06-06 12:17:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:17:51] ANSI_COLOR="0;31"
[2025-06-06 12:17:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:17:51] HOME_URL="https://www.centos.org/"
[2025-06-06 12:17:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:17:51] 
[2025-06-06 12:17:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:17:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:17:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:17:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:17:51] 
[2025-06-06 12:17:51] 2025-06-06 02:17:34,036 | INFO     | **************************************
[2025-06-06 12:17:51] 2025-06-06 02:17:34,538 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/26
[2025-06-06 12:17:51] 2025-06-06 02:17:34,554 | INFO     | sufficient remaining disk space (358763986944 B)
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | INFO     | update_server=False
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:17:51] 2025-06-06 02:17:34,555 | INFO     | aborting loop
[2025-06-06 12:17:51] 2025-06-06 02:17:34,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:17:51] 2025-06-06 02:17:34,742 | INFO     | all payload control threads have been joined
[2025-06-06 12:17:51] 2025-06-06 02:17:34,811 | INFO     | all data control threads have been joined
[2025-06-06 12:17:51] 2025-06-06 02:17:35,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:17:51] 2025-06-06 02:17:35,560 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:35,560 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:35,561 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:35,570 | INFO     | all job control threads have been joined
[2025-06-06 12:17:51] 2025-06-06 02:17:35,748 | INFO     | [payload] control thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:35,817 | INFO     | [data] control thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:35,928 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,263 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,325 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,575 | INFO     | [job] control thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,670 | INFO     | [job] validate thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,864 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,889 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:36,906 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:37,493 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:38,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:17:51] 2025-06-06 02:17:42,052 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:45,135 | INFO     | job.realtimelogging is not enabled
[2025-06-06 12:17:51] 2025-06-06 02:17:46,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:17:51] 2025-06-06 02:17:46,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138551346071360)>', '<ExcThread(monitor, started 138550855059200)>']
[2025-06-06 12:17:51] 2025-06-06 02:17:46,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:17:51] 2025-06-06 02:17:46,615 | INFO     | [monitor] control thread has ended
[2025-06-06 12:17:51] 2025-06-06 02:17:51,200 | INFO     | all workflow threads have been joined
[2025-06-06 12:17:51] 2025-06-06 02:17:51,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:17:51] 2025-06-06 02:17:51,201 | INFO     | traces error code: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:51,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:17:51] 2025-06-06 02:17:51,261 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:17:51] 2025-06-06 02:17:51,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:17:51] 2025-06-06 02:17:51,264 [wrapper] pilotpid: 431868
[2025-06-06 12:17:51] 2025-06-06 02:17:51,266 [wrapper] Pilot exit status: 0
[2025-06-06 12:17:51] 2025-06-06 02:17:51,274 [wrapper] pandaids: 6678153358
[2025-06-06 12:17:51] 2025-06-06 02:17:51,295 [wrapper] cleanup supervisor_pilot  490355 431869
[2025-06-06 12:17:51] 2025-06-06 02:17:51,297 [wrapper] Test setup, not cleaning
[2025-06-06 12:17:51] 2025-06-06 02:17:51,299 [wrapper] apfmon messages muted
[2025-06-06 12:17:51] 2025-06-06 02:17:51,301 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:17:51] 2025-06-06 02:17:51,303 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:17:51]  *** Error codes and diagnostics ***
[2025-06-06 12:17:51]     "exeErrorCode": 0,
[2025-06-06 12:17:51]     "exeErrorDiag": "",
[2025-06-06 12:17:51]     "pilotErrorCode": 0,
[2025-06-06 12:17:51]     "pilotErrorDiag": "",
[2025-06-06 12:17:51]  *** Listing of results directory ***
[2025-06-06 12:17:51] total 396256
[2025-06-06 12:17:51] -rw-r--r-- 1 michael michael    495897 Jun  4 07:57 pilot3.tar.gz
[2025-06-06 12:17:51] -rw-r--r-- 1 michael michael      5111 Jun  4 08:39 queuedata.json
[2025-06-06 12:17:51] -rwx------ 1 michael michael     37140 Jun  4 08:39 runpilot2-wrapper.sh
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael       100 Jun  6 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:17:51] -rwxr-xr-x 1 michael michael      7986 Jun  6 10:45 run_atlas
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael       105 Jun  6 10:45 job.xml
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael     15093 Jun  6 10:45 start_atlas.sh
[2025-06-06 12:17:51] drwxrwx--x 2 michael michael      4096 Jun  6 10:45 shared
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael    508880 Jun  6 10:45 input.tar.gz
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael      9802 Jun  6 10:45 init_data.xml
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael 216049255 Jun  6 10:45 EVNT.45006593._001900.pool.root.1
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael         0 Jun  6 10:45 boinc_lockfile
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael      2525 Jun  6 10:45 pandaJob.out
[2025-06-06 12:17:51] -rw------- 1 michael michael    987721 Jun  6 10:45 agis_schedconf.cvmfs.json
[2025-06-06 12:17:51] -rw------- 1 michael michael   1598969 Jun  6 10:45 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:17:51] drwx------ 4 michael michael      4096 Jun  6 10:45 pilot3
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael       529 Jun  6 12:17 boinc_task_state.xml
[2025-06-06 12:17:51] -rw------- 1 michael michael        95 Jun  6 12:17 pilot_heartbeat.json
[2025-06-06 12:17:51] -rw------- 1 michael michael 184254018 Jun  6 12:17 HITS.45006595._047376.pool.root.1
[2025-06-06 12:17:51] -rw------- 1 michael michael      1015 Jun  6 12:17 memory_monitor_summary.json
[2025-06-06 12:17:51] -rw------- 1 michael michael    257820 Jun  6 12:17 log.45006595._047376.job.log.tgz.1
[2025-06-06 12:17:51] -rw------- 1 michael michael      7634 Jun  6 12:17 heartbeat.json
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael        27 Jun  6 12:17 wrapper_checkpoint.txt
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael      8192 Jun  6 12:17 boinc_mmap_file
[2025-06-06 12:17:51] -rw------- 1 michael michael      4561 Jun  6 12:17 pilotlog.txt
[2025-06-06 12:17:51] -rw------- 1 michael michael    553160 Jun  6 12:17 log.45006595._047376.job.log.1
[2025-06-06 12:17:51] -rw------- 1 michael michael       357 Jun  6 12:17 output.list
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael       620 Jun  6 12:17 runtime_log
[2025-06-06 12:17:51] -rw------- 1 michael michael    829440 Jun  6 12:17 result.tar.gz
[2025-06-06 12:17:51] -rw------- 1 michael michael       641 Jun  6 12:17 sT2NDmCTpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrPmKDm4UepDn.diag
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael      8767 Jun  6 12:17 runtime_log.err
[2025-06-06 12:17:51] -rw-rw-r-- 1 michael michael     21173 Jun  6 12:17 stderr.txt
[2025-06-06 12:17:51] HITS file was successfully produced:
[2025-06-06 12:17:51] -rw------- 1 michael michael 184254018 Jun  6 12:17 shared/HITS.pool.root.1
[2025-06-06 12:17:51]  *** Contents of shared directory: ***
[2025-06-06 12:17:51] total 392260
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael     15093 Jun  6 10:45 start_atlas.sh
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael    508880 Jun  6 10:45 input.tar.gz
[2025-06-06 12:17:51] -rw-r--r-- 2 michael michael 216049255 Jun  6 10:45 ATLAS.root_0
[2025-06-06 12:17:51] -rw------- 1 michael michael 184254018 Jun  6 12:17 HITS.pool.root.1
[2025-06-06 12:17:51] -rw------- 1 michael michael    829440 Jun  6 12:17 result.tar.gz
12:17:52 (421141): run_atlas exited; CPU time 21074.093188
12:17:52 (421141): called boinc_finish(0)

</stderr_txt>
]]>

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