Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:16:22 (1282457): wrapper (7.7.26015): starting
13:16:22 (1282457): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:16:22] Arguments: --nthreads 4
[2025-06-04 13:16:22] Threads: 4
[2025-06-04 13:16:22] Checking for CVMFS
[2025-06-04 13:16:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:16:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:16:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:16:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:16:22] 2.9.2.0 289090 2566 93852 146778 1 55 23616969 36864001 0 130560 0 2657742 99.993 672659 30503 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:16:22] CVMFS is ok
[2025-06-04 13:16:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:16:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:16:22] Further information can be found at the LHC@home message board.
[2025-06-04 13:16:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:16:22] Checking for apptainer binary...
[2025-06-04 13:16:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:16:22] Running /usr/bin/apptainer --version
[2025-06-04 13:16:22] apptainer version 1.3.6-6.1
[2025-06-04 13:16:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:16:22] belleA263a
[2025-06-04 13:16:22] apptainer works
[2025-06-04 13:16:22] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:16:22] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:16:22] Starting ATLAS job with PandaID=6678154290
[2025-06-04 13:16:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:20:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:20:49]  guid=545976b4-8a15-4377-acab-4eadab019346
[2025-06-04 14:20:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:20:49]  is_altstaged=None
[2025-06-04 14:20:49]  is_tar=False
[2025-06-04 14:20:49]  lfn=log.45006595._047610.job.log.tgz.1
[2025-06-04 14:20:49]  mtime=0
[2025-06-04 14:20:49]  protocol_id=None
[2025-06-04 14:20:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:20:49]  replicas=None
[2025-06-04 14:20:49]  scope=mc23_13p6TeV
[2025-06-04 14:20:49]  status=None
[2025-06-04 14:20:49]  status_code=0
[2025-06-04 14:20:49]  storage_token=
[2025-06-04 14:20:49]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678154290/log.45006595._047610.job.log.tgz.1
[2025-06-04 14:20:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/e3/log.45006595._047610.job.log.tgz.1
[2025-06-04 14:20:49]  workdir=None
[2025-06-04 14:20:49] ]
[2025-06-04 14:20:49] 2025-06-04 12:20:23,866 | INFO     | transferring file log.45006595._047610.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678154290/log.45006595._047610.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 14:20:49] 2025-06-04 12:20:23,866 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678154290/log.45006595._047610.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0476
[2025-06-04 14:20:49] 2025-06-04 12:20:23,886 | INFO     | adding to output.list: log.45006595._047610.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/e3/log.45006595._047610.job.log.tg
[2025-06-04 14:20:49] 2025-06-04 12:20:23,886 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:20:49] 2025-06-04 12:20:23,887 | INFO     | summary of transferred files:
[2025-06-04 14:20:49] 2025-06-04 12:20:23,887 | INFO     |  -- lfn=log.45006595._047610.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:20:49] 2025-06-04 12:20:23,887 | INFO     | stage-out finished correctly
[2025-06-04 14:20:49] 2025-06-04 12:20:24,806 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:20:49] 2025-06-04 12:20:26,221 | INFO     | job 6678154290 has state=finished
[2025-06-04 14:20:49] 2025-06-04 12:20:26,221 | INFO     | preparing for final server update for job 6678154290 in state='finished'
[2025-06-04 14:20:49] 2025-06-04 12:20:26,830 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 14:20:49] 2025-06-04 12:20:26,831 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:20:49] 2025-06-04 12:20:26,831 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:20:49] 2025-06-04 12:20:26,831 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:20:49] 2025-06-04 12:20:26,831 | INFO     | job 6678154290 has finished - writing final server update
[2025-06-04 14:20:49] 2025-06-04 12:20:26,831 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:20:49] 2025-06-04 12:20:26,832 | INFO     | executing command: lscpu
[2025-06-04 14:20:49] 2025-06-04 12:20:26,854 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:20:49] 2025-06-04 12:20:28,932 | WARNING  | process 1292800 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:20:49] 2025-06-04 12:20:28,932 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678154290/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:20:49] 2025-06-04 12:20:28,976 | INFO     | number of running child processes to parent process 1292800: 1
[2025-06-04 14:20:49] 2025-06-04 12:20:28,976 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:20:49] 2025-06-04 12:20:30,357 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:20:49] 2025-06-04 12:20:30,357 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678154290/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:20:49] 2025-06-04 12:20:30,358 | INFO     | extracted standard info from prmon json
[2025-06-04 14:20:49] 2025-06-04 12:20:30,358 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:20:49] 2025-06-04 12:20:30,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:20:49] 2025-06-04 12:20:30,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:20:49] 2025-06-04 12:20:30,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | sum of deviations: -5768791014.5
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | mean x: 1749037797.5
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | mean y: 2501977.660714286
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | -- intersect: 185347130747.53198
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | intersect: 185347130747.53198
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | chi2: 0.04977127233945524
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | -- intersect: 185347130747.53198
[2025-06-04 14:20:49] 2025-06-04 12:20:30,359 | INFO     | current memory leak: -105.97 B/s (using 56 data points, chi2=0.05)
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | ..............................
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . Timing measurements:
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . get job = 0 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . initial setup = 1 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . payload setup = 5 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . stage-in = 0 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . payload execution = 3809 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . stage-out = 0 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | . log creation = 0 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,360 | INFO     | ..............................
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | 
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | job summary report
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | --------------------------------------------------
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | PanDA job id: 6678154290
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | task id: 45006595
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | errors: (none)
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | pilot state: finished 
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | transexitcode: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | exeerrorcode: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | exeerrordiag: 
[2025-06-04 14:20:49] 2025-06-04 12:20:30,401 | INFO     | exitcode: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | exitmsg: OK
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | cpuconsumptiontime: 14263 s
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | nevents: 400
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | neventsw: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | pid: 1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | pgrp: 1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | corecount: 4
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | event service: False
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | sizes: {0: 2404354, 1: 2405213, 4: 2405419, 11: 2405447, 3817: 2431241, 3819: 2440188, 3820: 2440372, 3825: 2440542}
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | --------------------------------------------------
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | 
[2025-06-04 14:20:49] 2025-06-04 12:20:30,402 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | job 6678154290 has completed (purged errors)
[2025-06-04 14:20:49] 2025-06-04 12:20:30,423 | INFO     | overall cleanup function is called
[2025-06-04 14:20:49] 2025-06-04 12:20:31,430 | INFO     | --- collectZombieJob: --- 10, [1292800]
[2025-06-04 14:20:49] 2025-06-04 12:20:31,430 | INFO     | zombie collector waiting for pid 1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:31,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:20:49] 2025-06-04 12:20:31,430 | INFO     | collected zombie processes
[2025-06-04 14:20:49] 2025-06-04 12:20:31,430 | INFO     | will attempt to kill all subprocesses of pid=1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:31,475 | INFO     | process IDs to be killed: [1292800] (in reverse order)
[2025-06-04 14:20:49] 2025-06-04 12:20:31,510 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:20:49] 2025-06-04 12:20:31,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:20:49] 2025-06-04 12:20:31,512 | INFO     | did not find any defunct processes belonging to 1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:31,513 | INFO     | did not find any defunct processes belonging to 1292800
[2025-06-04 14:20:49] 2025-06-04 12:20:31,513 | INFO     | ready for new job
[2025-06-04 14:20:49] 2025-06-04 12:20:31,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:20:49] 2025-06-04 12:20:31,514 | INFO     | **************************************
[2025-06-04 14:20:49] 2025-06-04 12:20:31,514 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:20:49] 2025-06-04 12:20:31,514 | INFO     | **************************************
[2025-06-04 14:20:49] 2025-06-04 12:20:31,514 | INFO     | 
[2025-06-04 14:20:49] 2025-06-04 12:20:31,515 | INFO     | architecture information:
[2025-06-04 14:20:49] 2025-06-04 12:20:31,515 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:20:49] 2025-06-04 12:20:31,530 | INFO     | cat /etc/os-release:
[2025-06-04 14:20:49] NAME="CentOS Linux"
[2025-06-04 14:20:49] VERSION="7 (Core)"
[2025-06-04 14:20:49] ID="centos"
[2025-06-04 14:20:49] ID_LIKE="rhel fedora"
[2025-06-04 14:20:49] VERSION_ID="7"
[2025-06-04 14:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:20:49] ANSI_COLOR="0;31"
[2025-06-04 14:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:20:49] HOME_URL="https://www.centos.org/"
[2025-06-04 14:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:20:49] 
[2025-06-04 14:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:20:49] 
[2025-06-04 14:20:49] 2025-06-04 12:20:31,530 | INFO     | **************************************
[2025-06-04 14:20:49] 2025-06-04 12:20:32,033 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | INFO     | sufficient remaining disk space (332015861760 B)
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | INFO     | update_server=False
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:20:49] 2025-06-04 12:20:32,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:20:49] 2025-06-04 12:20:32,054 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:20:49] 2025-06-04 12:20:32,054 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:20:49] 2025-06-04 12:20:32,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:20:49] 2025-06-04 12:20:32,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:20:49] 2025-06-04 12:20:32,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:20:49] 2025-06-04 12:20:32,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:20:49] 2025-06-04 12:20:32,485 | INFO     | aborting loop
[2025-06-04 14:20:49] 2025-06-04 12:20:32,502 | INFO     | all data control threads have been joined
[2025-06-04 14:20:49] 2025-06-04 12:20:32,628 | INFO     | all payload control threads have been joined
[2025-06-04 14:20:49] 2025-06-04 12:20:33,059 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,059 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,296 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,491 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,508 | INFO     | [data] control thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,543 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,634 | INFO     | [payload] control thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:33,693 | INFO     | all job control threads have been joined
[2025-06-04 14:20:49] 2025-06-04 12:20:34,060 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,120 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,157 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,221 | INFO     | [job] validate thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,290 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,407 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:34,699 | INFO     | [job] control thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:35,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:20:49] 2025-06-04 12:20:39,367 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:42,791 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:20:49] 2025-06-04 12:20:43,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:20:49] 2025-06-04 12:20:44,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949608089408)>', '<ExcThread(monitor, started 139949244389120)>']
[2025-06-04 14:20:49] 2025-06-04 12:20:45,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:20:49] 2025-06-04 12:20:45,123 | INFO     | [monitor] control thread has ended
[2025-06-04 14:20:49] 2025-06-04 12:20:49,792 | INFO     | all workflow threads have been joined
[2025-06-04 14:20:49] 2025-06-04 12:20:49,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:20:49] 2025-06-04 12:20:49,793 | INFO     | traces error code: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:49,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:20:49] 2025-06-04 12:20:49,876 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:20:49] 2025-06-04 12:20:49,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:20:49] 2025-06-04 12:20:49,885 [wrapper] pilotpid: 1286165
[2025-06-04 14:20:49] 2025-06-04 12:20:49,890 [wrapper] Pilot exit status: 0
[2025-06-04 14:20:49] 2025-06-04 12:20:49,902 [wrapper] pandaids: 6678154290
[2025-06-04 14:20:49] 2025-06-04 12:20:49,926 [wrapper] cleanup supervisor_pilot 1302427 1286166
[2025-06-04 14:20:49] 2025-06-04 12:20:49,930 [wrapper] Test setup, not cleaning
[2025-06-04 14:20:49] 2025-06-04 12:20:49,934 [wrapper] apfmon messages muted
[2025-06-04 14:20:49] 2025-06-04 12:20:49,938 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:20:49] 2025-06-04 12:20:49,942 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:20:49]  *** Error codes and diagnostics ***
[2025-06-04 14:20:50]     "exeErrorCode": 0,
[2025-06-04 14:20:50]     "exeErrorDiag": "",
[2025-06-04 14:20:50]     "pilotErrorCode": 0,
[2025-06-04 14:20:50]     "pilotErrorDiag": "",
[2025-06-04 14:20:50]  *** Listing of results directory ***
[2025-06-04 14:20:50] total 395832
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 14:20:50] -rwx------ 1 boinc boinc     37140 Jun  4 00:50 runpilot2-wrapper.sh
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:50 queuedata.json
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:20:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:16 run_atlas
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:16 job.xml
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc 218620839 Jun  4 13:16 EVNT.45006593._001911.pool.root.1
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc      6863 Jun  4 13:16 init_data.xml
[2025-06-04 14:20:50] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:16 shared
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc    508873 Jun  4 13:16 input.tar.gz
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:16 start_atlas.sh
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:16 boinc_lockfile
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc      2524 Jun  4 13:16 pandaJob.out
[2025-06-04 14:20:50] -rw------- 1 boinc boinc    986812 Jun  4 13:16 agis_schedconf.cvmfs.json
[2025-06-04 14:20:50] -rw------- 1 boinc boinc   1603667 Jun  4 13:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:20:50] drwx------ 4 boinc boinc      4096 Jun  4 13:16 pilot3
[2025-06-04 14:20:50] -rw------- 1 boinc boinc        95 Jun  4 14:19 pilot_heartbeat.json
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:20 boinc_task_state.xml
[2025-06-04 14:20:50] -rw------- 1 boinc boinc 181658848 Jun  4 14:20 HITS.45006595._047610.pool.root.1
[2025-06-04 14:20:50] -rw------- 1 boinc boinc      1023 Jun  4 14:20 memory_monitor_summary.json
[2025-06-04 14:20:50] -rw------- 1 boinc boinc    220162 Jun  4 14:20 log.45006595._047610.job.log.tgz.1
[2025-06-04 14:20:50] -rw------- 1 boinc boinc      7671 Jun  4 14:20 heartbeat.json
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:20 boinc_mmap_file
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:20 wrapper_checkpoint.txt
[2025-06-04 14:20:50] -rw------- 1 boinc boinc      4552 Jun  4 14:20 pilotlog.txt
[2025-06-04 14:20:50] -rw------- 1 boinc boinc    385209 Jun  4 14:20 log.45006595._047610.job.log.1
[2025-06-04 14:20:50] -rw------- 1 boinc boinc       357 Jun  4 14:20 output.list
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:20 runtime_log
[2025-06-04 14:20:50] -rw------- 1 boinc boinc    624640 Jun  4 14:20 result.tar.gz
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc      8753 Jun  4 14:20 runtime_log.err
[2025-06-04 14:20:50] -rw------- 1 boinc boinc       662 Jun  4 14:20 qWLMDmRdpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkSmKDmgr49in.diag
[2025-06-04 14:20:50] -rw-r--r-- 1 boinc boinc     21297 Jun  4 14:20 stderr.txt
[2025-06-04 14:20:50] HITS file was successfully produced:
[2025-06-04 14:20:50] -rw------- 1 boinc boinc 181658848 Jun  4 14:20 shared/HITS.pool.root.1
[2025-06-04 14:20:50]  *** Contents of shared directory: ***
[2025-06-04 14:20:50] total 392040
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc 218620839 Jun  4 13:16 ATLAS.root_0
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc    508873 Jun  4 13:16 input.tar.gz
[2025-06-04 14:20:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:16 start_atlas.sh
[2025-06-04 14:20:50] -rw------- 1 boinc boinc 181658848 Jun  4 14:20 HITS.pool.root.1
[2025-06-04 14:20:50] -rw------- 1 boinc boinc    624640 Jun  4 14:20 result.tar.gz
14:20:51 (1282457): run_atlas exited; CPU time 14270.569163
14:20:51 (1282457): called boinc_finish(0)

</stderr_txt>
]]>

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