Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:17 (2661027): wrapper (7.7.26015): starting
23:47:17 (2661027): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:47:17] Arguments: --nthreads 8
[2025-06-03 23:47:17] Threads: 8
[2025-06-03 23:47:17] Checking for CVMFS
[2025-06-03 23:47:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:47:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:47:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:47:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:47:17] 2.12.6.0 267692 23950 246680 146767 0 537 40565361 40960001 25034 16776704 1 309573925 99.788 171705996 36792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:47:17] CVMFS is ok
[2025-06-03 23:47:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:47:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:47:17] Further information can be found at the LHC@home message board.
[2025-06-03 23:47:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:47:17] Checking for apptainer binary...
[2025-06-03 23:47:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:47:17] Running /usr/bin/apptainer --version
[2025-06-03 23:47:17] apptainer version 1.4.1-1.el9
[2025-06-03 23:47:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:47:17] c8-16-1.aglt2.org
[2025-06-03 23:47:17] apptainer works
[2025-06-03 23:47:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:47:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:47:17] Starting ATLAS job with PandaID=6678154382
[2025-06-03 23:47:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:37:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:37:54]  lfn=log.45006595._047702.job.log.tgz.1
[2025-06-04 00:37:54]  mtime=0
[2025-06-04 00:37:54]  protocol_id=None
[2025-06-04 00:37:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:37:54]  replicas=None
[2025-06-04 00:37:54]  scope=mc23_13p6TeV
[2025-06-04 00:37:54]  status=None
[2025-06-04 00:37:54]  status_code=0
[2025-06-04 00:37:54]  storage_token=
[2025-06-04 00:37:54]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678154382/log.45006595._047702.job.log.tgz.1
[2025-06-04 00:37:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/a8/log.45006595._047702.job.log.tgz.1
[2025-06-04 00:37:54]  workdir=None
[2025-06-04 00:37:54] ]
[2025-06-04 00:37:54] 2025-06-04 04:37:27,164 | INFO     | transferring file log.45006595._047702.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678154382/log.45006595._047702.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:37:54] 2025-06-04 04:37:27,164 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678154382/log.45006595._047702.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._047702.job
[2025-06-04 00:37:54] 2025-06-04 04:37:27,180 | INFO     | adding to output.list: log.45006595._047702.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/a8/log.45006595._047702.job.log.tg
[2025-06-04 00:37:54] 2025-06-04 04:37:27,181 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:37:54] 2025-06-04 04:37:27,181 | INFO     | summary of transferred files:
[2025-06-04 00:37:54] 2025-06-04 04:37:27,181 | INFO     |  -- lfn=log.45006595._047702.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:37:54] 2025-06-04 04:37:27,181 | INFO     | stage-out finished correctly
[2025-06-04 00:37:54] 2025-06-04 04:37:28,445 | WARNING  | process 2678151 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:37:54] 2025-06-04 04:37:28,446 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678154382/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:37:54] 2025-06-04 04:37:28,457 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:37:54] 2025-06-04 04:37:28,866 | INFO     | number of running child processes to parent process 2678151: 1
[2025-06-04 00:37:54] 2025-06-04 04:37:28,866 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:37:54] 2025-06-04 04:37:29,676 | INFO     | job 6678154382 has state=finished
[2025-06-04 00:37:54] 2025-06-04 04:37:29,676 | INFO     | preparing for final server update for job 6678154382 in state='finished'
[2025-06-04 00:37:54] 2025-06-04 04:37:29,676 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:37:54] 2025-06-04 04:37:29,676 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:37:54] 2025-06-04 04:37:29,676 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:37:54] 2025-06-04 04:37:29,677 | INFO     | job 6678154382 has finished - writing final server update
[2025-06-04 00:37:54] 2025-06-04 04:37:29,677 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:37:54] 2025-06-04 04:37:29,681 | INFO     | executing command: lscpu
[2025-06-04 00:37:54] 2025-06-04 04:37:29,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:37:54] 2025-06-04 04:37:31,368 | INFO     | monitor loop #222: job 0:6678154382 is in state 'finished'
[2025-06-04 00:37:54] 2025-06-04 04:37:31,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,573 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 00:37:54] 2025-06-04 04:37:33,573 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678154382/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,574 | INFO     | extracted standard info from prmon json
[2025-06-04 00:37:54] 2025-06-04 04:37:33,574 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:37:54] 2025-06-04 04:37:33,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:37:54] 2025-06-04 04:37:33,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:37:54] 2025-06-04 04:37:33,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | sum of deviations: 3564087747.9999995
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | mean x: 1749010427.5
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | mean y: 2445600.523809524
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | -- intersect: -271491881815.37512
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | intersect: -271491881815.37512
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | chi2: 0.7309398270013114
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | -- intersect: -271491881815.37512
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | current memory leak: 155.23 B/s (using 42 data points, chi2=0.73)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | ..............................
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | . Timing measurements:
[2025-06-04 00:37:54] 2025-06-04 04:37:33,575 | INFO     | . get job = 0 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . initial setup = 2 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . payload setup = 6 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . stage-in = 0 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . payload execution = 2975 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . stage-out = 0 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | . log creation = 0 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,576 | INFO     | ..............................
[2025-06-04 00:37:54] 2025-06-04 04:37:33,884 | INFO     | 
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | job summary report
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | --------------------------------------------------
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | PanDA job id: 6678154382
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | task id: 45006595
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | errors: (none)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | pilot state: finished 
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | transexitcode: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | exeerrorcode: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | exeerrordiag: 
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | exitcode: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | exitmsg: OK
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | cpuconsumptiontime: 19223 s
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | nevents: 400
[2025-06-04 00:37:54] 2025-06-04 04:37:33,885 | INFO     | neventsw: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | pid: 2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | pgrp: 2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | corecount: 8
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | event service: False
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 2985: 2439720, 2987: 2439720, 2992: 2439890}
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | --------------------------------------------------
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | 
[2025-06-04 00:37:54] 2025-06-04 04:37:33,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 00:37:54] 2025-06-04 04:37:33,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | job 6678154382 has completed (purged errors)
[2025-06-04 00:37:54] 2025-06-04 04:37:33,911 | INFO     | overall cleanup function is called
[2025-06-04 00:37:54] 2025-06-04 04:37:34,837 | INFO     | PID=2664975 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 00:37:54] 2025-06-04 04:37:34,837 | INFO     | .. there are 36 such processes running
[2025-06-04 00:37:54] 2025-06-04 04:37:34,918 | INFO     | --- collectZombieJob: --- 10, [2678151]
[2025-06-04 00:37:54] 2025-06-04 04:37:34,919 | INFO     | zombie collector waiting for pid 2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:34,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:37:54] 2025-06-04 04:37:34,919 | INFO     | collected zombie processes
[2025-06-04 00:37:54] 2025-06-04 04:37:34,919 | INFO     | will attempt to kill all subprocesses of pid=2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:35,220 | INFO     | process IDs to be killed: [2678151] (in reverse order)
[2025-06-04 00:37:54] 2025-06-04 04:37:35,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:37:54] 2025-06-04 04:37:35,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:37:54] 2025-06-04 04:37:35,395 | INFO     | did not find any defunct processes belonging to 2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:35,417 | INFO     | did not find any defunct processes belonging to 2678151
[2025-06-04 00:37:54] 2025-06-04 04:37:35,418 | INFO     | ready for new job
[2025-06-04 00:37:54] 2025-06-04 04:37:35,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:37:54] 2025-06-04 04:37:35,419 | INFO     | **************************************
[2025-06-04 00:37:54] 2025-06-04 04:37:35,419 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:37:54] 2025-06-04 04:37:35,419 | INFO     | **************************************
[2025-06-04 00:37:54] 2025-06-04 04:37:35,419 | INFO     | 
[2025-06-04 00:37:54] 2025-06-04 04:37:35,437 | INFO     | architecture information:
[2025-06-04 00:37:54] 2025-06-04 04:37:35,438 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:37:54] 2025-06-04 04:37:35,452 | INFO     | cat /etc/os-release:
[2025-06-04 00:37:54] NAME="CentOS Linux"
[2025-06-04 00:37:54] VERSION="7 (Core)"
[2025-06-04 00:37:54] ID="centos"
[2025-06-04 00:37:54] ID_LIKE="rhel fedora"
[2025-06-04 00:37:54] VERSION_ID="7"
[2025-06-04 00:37:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:37:54] ANSI_COLOR="0;31"
[2025-06-04 00:37:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:37:54] HOME_URL="https://www.centos.org/"
[2025-06-04 00:37:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:37:54] 
[2025-06-04 00:37:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:37:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:37:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:37:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:37:54] 
[2025-06-04 00:37:54] 2025-06-04 04:37:35,452 | INFO     | **************************************
[2025-06-04 00:37:54] 2025-06-04 04:37:35,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 00:37:54] 2025-06-04 04:37:35,969 | INFO     | sufficient remaining disk space (171775623168 B)
[2025-06-04 00:37:54] 2025-06-04 04:37:35,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:37:54] 2025-06-04 04:37:35,970 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:37:54] 2025-06-04 04:37:35,970 | INFO     | update_server=False
[2025-06-04 00:37:54] 2025-06-04 04:37:35,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:37:54] 2025-06-04 04:37:35,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:37:54] 2025-06-04 04:37:36,374 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 00:37:54] 2025-06-04 04:37:36,375 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 00:37:54] 2025-06-04 04:37:36,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:37:54] 2025-06-04 04:37:36,375 | INFO     | will abort loop
[2025-06-04 00:37:54] 2025-06-04 04:37:36,397 | INFO     | all data control threads have been joined
[2025-06-04 00:37:54] 2025-06-04 04:37:36,842 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:37:54] 2025-06-04 04:37:36,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:37:54] 2025-06-04 04:37:36,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:37:54] 2025-06-04 04:37:36,970 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:36,989 | INFO     | all payload control threads have been joined
[2025-06-04 00:37:54] 2025-06-04 04:37:37,280 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,380 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,402 | INFO     | [data] control thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,578 | INFO     | all job control threads have been joined
[2025-06-04 00:37:54] 2025-06-04 04:37:37,672 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,929 | INFO     | [job] validate thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,975 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:37,994 | INFO     | [payload] control thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,005 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,027 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,040 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,352 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,583 | INFO     | [job] control thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:38,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:37:54] 2025-06-04 04:37:39,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:37:54] 2025-06-04 04:37:39,626 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:43,024 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:46,659 | INFO     | job.realtimelogging is not enabled
[2025-06-04 00:37:54] 2025-06-04 04:37:47,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:37:54] 2025-06-04 04:37:49,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897512363840)>', '<ExcThread(monitor, started 139896874329856)>']
[2025-06-04 00:37:54] 2025-06-04 04:37:49,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:37:54] 2025-06-04 04:37:49,908 | INFO     | [monitor] control thread has ended
[2025-06-04 00:37:54] 2025-06-04 04:37:54,349 | INFO     | all workflow threads have been joined
[2025-06-04 00:37:54] 2025-06-04 04:37:54,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:37:54] 2025-06-04 04:37:54,350 | INFO     | traces error code: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:54,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:37:54] 2025-06-04 04:37:54,453 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:37:54] 2025-06-04 04:37:54,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:37:54] 2025-06-04 04:37:54,458 [wrapper] pilotpid: 2664975
[2025-06-04 00:37:54] 2025-06-04 04:37:54,461 [wrapper] Pilot exit status: 0
[2025-06-04 00:37:54] 2025-06-04 04:37:54,470 [wrapper] pandaids: 6678154382
[2025-06-04 00:37:54] 2025-06-04 04:37:54,576 [wrapper] cleanup supervisor_pilot 3288810 2664976
[2025-06-04 00:37:54] 2025-06-04 04:37:54,579 [wrapper] Test setup, not cleaning
[2025-06-04 00:37:54] 2025-06-04 04:37:54,581 [wrapper] apfmon messages muted
[2025-06-04 00:37:54] 2025-06-04 04:37:54,584 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:37:54] 2025-06-04 04:37:54,586 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:37:54]  *** Error codes and diagnostics ***
[2025-06-04 00:37:54]     "exeErrorCode": 0,
[2025-06-04 00:37:54]     "exeErrorDiag": "",
[2025-06-04 00:37:54]     "pilotErrorCode": 0,
[2025-06-04 00:37:54]     "pilotErrorDiag": "",
[2025-06-04 00:37:54]  *** Listing of results directory ***
[2025-06-04 00:37:54] total 389288
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:55 queuedata.json
[2025-06-04 00:37:54] -rwx------. 1 boincer umatlas     37140 Jun  3 18:55 runpilot2-wrapper.sh
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:37:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:47 run_atlas
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:47 job.xml
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas 215689064 Jun  3 23:47 EVNT.45006593._001914.pool.root.1
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:47 start_atlas.sh
[2025-06-04 00:37:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:47 shared
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 23:47 input.tar.gz
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:47 boinc_lockfile
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 23:47 pandaJob.out
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas    986077 Jun  3 23:47 agis_schedconf.cvmfs.json
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:37:54] drwx------. 4 boincer umatlas      4096 Jun  3 23:47 pilot3
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas      7161 Jun  4 00:37 init_data.xml
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas 177892998 Jun  4 00:37 HITS.45006595._047702.pool.root.1
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas       529 Jun  4 00:37 boinc_task_state.xml
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas      1028 Jun  4 00:37 memory_monitor_summary.json
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas    294672 Jun  4 00:37 log.45006595._047702.job.log.tgz.1
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas        95 Jun  4 00:37 pilot_heartbeat.json
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas      7684 Jun  4 00:37 heartbeat.json
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:37 boinc_mmap_file
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:37 wrapper_checkpoint.txt
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas      4612 Jun  4 00:37 pilotlog.txt
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas    315052 Jun  4 00:37 log.45006595._047702.job.log.1
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas       357 Jun  4 00:37 output.list
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:37 runtime_log
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas    624640 Jun  4 00:37 result.tar.gz
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 00:37 runtime_log.err
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas       650 Jun  4 00:37 lc1NDm3ipg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjCaKDmfddQIn.diag
[2025-06-04 00:37:54] -rw-r--r--. 1 boincer umatlas     21614 Jun  4 00:37 stderr.txt
[2025-06-04 00:37:54] HITS file was successfully produced:
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas 177892998 Jun  4 00:37 shared/HITS.pool.root.1
[2025-06-04 00:37:54]  *** Contents of shared directory: ***
[2025-06-04 00:37:54] total 385496
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas 215689064 Jun  3 23:47 ATLAS.root_0
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:47 start_atlas.sh
[2025-06-04 00:37:54] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 23:47 input.tar.gz
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas 177892998 Jun  4 00:37 HITS.pool.root.1
[2025-06-04 00:37:54] -rw-------. 1 boincer umatlas    624640 Jun  4 00:37 result.tar.gz
00:37:55 (2661027): run_atlas exited; CPU time 19278.549817
00:37:55 (2661027): called boinc_finish(0)

</stderr_txt>
]]>

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