Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:39:17 (3746006): wrapper (7.7.26015): starting
00:39:17 (3746006): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:39:17] Arguments: --nthreads 12
[2025-06-04 00:39:17] Threads: 12
[2025-06-04 00:39:17] Checking for CVMFS
[2025-06-04 00:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:39:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:39:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:39:17] 2.12.6.0 5559 866 130360 146768 2 66 27506437 40960000 6532 16776704 0 8021482 99.897 1518026 36772 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:39:17] CVMFS is ok
[2025-06-04 00:39:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:39:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:39:17] Further information can be found at the LHC@home message board.
[2025-06-04 00:39:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:39:17] Checking for apptainer binary...
[2025-06-04 00:39:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:39:17] Running /usr/bin/apptainer --version
[2025-06-04 00:39:17] apptainer version 1.4.1-1.el9
[2025-06-04 00:39:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:39:17] c6-8-12-3.aglt2.org
[2025-06-04 00:39:17] apptainer works
[2025-06-04 00:39:17] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:39:17] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:39:17] Starting ATLAS job with PandaID=6678153442
[2025-06-04 00:39:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:22:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:22:31]  is_tar=False
[2025-06-04 01:22:31]  lfn=log.45006595._047460.job.log.tgz.1
[2025-06-04 01:22:31]  mtime=0
[2025-06-04 01:22:31]  protocol_id=None
[2025-06-04 01:22:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:22:31]  replicas=None
[2025-06-04 01:22:31]  scope=mc23_13p6TeV
[2025-06-04 01:22:31]  status=None
[2025-06-04 01:22:31]  status_code=0
[2025-06-04 01:22:31]  storage_token=
[2025-06-04 01:22:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678153442/log.45006595._047460.job.log.tgz.1
[2025-06-04 01:22:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/15/log.45006595._047460.job.log.tgz.1
[2025-06-04 01:22:31]  workdir=None
[2025-06-04 01:22:31] ]
[2025-06-04 01:22:31] 2025-06-04 05:22:02,992 | INFO     | transferring file log.45006595._047460.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678153442/log.45006595._047460.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:22:31] 2025-06-04 05:22:02,992 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678153442/log.45006595._047460.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047460.job
[2025-06-04 01:22:31] 2025-06-04 05:22:03,008 | INFO     | adding to output.list: log.45006595._047460.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/15/log.45006595._047460.job.log.tg
[2025-06-04 01:22:31] 2025-06-04 05:22:03,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:22:31] 2025-06-04 05:22:03,009 | INFO     | summary of transferred files:
[2025-06-04 01:22:31] 2025-06-04 05:22:03,010 | INFO     |  -- lfn=log.45006595._047460.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:22:31] 2025-06-04 05:22:03,010 | INFO     | stage-out finished correctly
[2025-06-04 01:22:31] 2025-06-04 05:22:04,055 | INFO     | monitor loop #195: job 0:6678153442 is in state 'finished'
[2025-06-04 01:22:31] 2025-06-04 05:22:04,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:22:31] 2025-06-04 05:22:06,057 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:22:31] 2025-06-04 05:22:06,191 | INFO     | 2562s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 01:22:31] 2025-06-04 05:22:06,559 | INFO     | monitor loop #196: job 0:6678153442 is in state 'finished'
[2025-06-04 01:22:31] 2025-06-04 05:22:06,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:22:31] 2025-06-04 05:22:08,032 | INFO     | job 6678153442 has state=finished
[2025-06-04 01:22:31] 2025-06-04 05:22:08,032 | INFO     | preparing for final server update for job 6678153442 in state='finished'
[2025-06-04 01:22:31] 2025-06-04 05:22:08,093 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 01:22:31] 2025-06-04 05:22:08,093 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:22:31] 2025-06-04 05:22:08,093 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:22:31] 2025-06-04 05:22:08,093 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:22:31] 2025-06-04 05:22:08,093 | INFO     | job 6678153442 has finished - writing final server update
[2025-06-04 01:22:31] 2025-06-04 05:22:08,094 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:22:31] 2025-06-04 05:22:08,109 | INFO     | executing command: lscpu
[2025-06-04 01:22:31] 2025-06-04 05:22:08,175 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:22:31] 2025-06-04 05:22:09,062 | INFO     | monitor loop #197: job 0:6678153442 is in state 'finished'
[2025-06-04 01:22:31] 2025-06-04 05:22:09,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,526 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:22:31] 2025-06-04 05:22:11,526 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678153442/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,527 | INFO     | extracted standard info from prmon json
[2025-06-04 01:22:31] 2025-06-04 05:22:11,527 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:22:31] 2025-06-04 05:22:11,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:22:31] 2025-06-04 05:22:11,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:22:31] 2025-06-04 05:22:11,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:22:31] 2025-06-04 05:22:11,529 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:22:31] 2025-06-04 05:22:11,529 | INFO     | sum of square deviations: 13283970.0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,529 | INFO     | sum of deviations: 3949300369.0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,529 | INFO     | mean x: 1749013331.0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | mean y: 2635485.2285714285
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | -- intersect: -519975879484.635
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | intersect: -519975879484.635
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | chi2: 0.7749469831788174
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | -- intersect: -519975879484.635
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | current memory leak: 297.30 B/s (using 35 data points, chi2=0.77)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | ..............................
[2025-06-04 01:22:31] 2025-06-04 05:22:11,530 | INFO     | . Timing measurements:
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . get job = 0 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . initial setup = 2 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . payload setup = 5 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . stage-in = 0 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . payload execution = 2533 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . stage-out = 0 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | . log creation = 0 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,531 | INFO     | ..............................
[2025-06-04 01:22:31] 2025-06-04 05:22:11,598 | INFO     | 
[2025-06-04 01:22:31] 2025-06-04 05:22:11,598 | INFO     | job summary report
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | --------------------------------------------------
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | PanDA job id: 6678153442
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | task id: 45006595
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | errors: (none)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | pilot state: finished 
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | transexitcode: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | exeerrorcode: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | exeerrordiag: 
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | exitcode: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | exitmsg: OK
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | cpuconsumptiontime: 23381 s
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | nevents: 400
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | neventsw: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,599 | INFO     | pid: 3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | pgrp: 3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | corecount: 12
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | event service: False
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | sizes: {0: 2405182, 3: 2405388, 11: 2405416, 2541: 2430571, 2542: 2439512, 2545: 2439568, 2551: 2439866}
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | --------------------------------------------------
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | 
[2025-06-04 01:22:31] 2025-06-04 05:22:11,600 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:22:31] 2025-06-04 05:22:11,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | job 6678153442 has completed (purged errors)
[2025-06-04 01:22:31] 2025-06-04 05:22:11,614 | INFO     | overall cleanup function is called
[2025-06-04 01:22:31] 2025-06-04 05:22:12,621 | INFO     | --- collectZombieJob: --- 10, [3758548]
[2025-06-04 01:22:31] 2025-06-04 05:22:12,622 | INFO     | zombie collector waiting for pid 3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:12,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:22:31] 2025-06-04 05:22:12,622 | INFO     | collected zombie processes
[2025-06-04 01:22:31] 2025-06-04 05:22:12,622 | INFO     | will attempt to kill all subprocesses of pid=3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:12,793 | INFO     | process IDs to be killed: [3758548] (in reverse order)
[2025-06-04 01:22:31] 2025-06-04 05:22:12,851 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:22:31] 2025-06-04 05:22:12,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:22:31] 2025-06-04 05:22:12,863 | INFO     | did not find any defunct processes belonging to 3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:12,870 | INFO     | did not find any defunct processes belonging to 3758548
[2025-06-04 01:22:31] 2025-06-04 05:22:12,870 | INFO     | ready for new job
[2025-06-04 01:22:31] 2025-06-04 05:22:12,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:22:31] 2025-06-04 05:22:12,871 | INFO     | **************************************
[2025-06-04 01:22:31] 2025-06-04 05:22:12,871 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:22:31] 2025-06-04 05:22:12,872 | INFO     | **************************************
[2025-06-04 01:22:31] 2025-06-04 05:22:12,872 | INFO     | 
[2025-06-04 01:22:31] 2025-06-04 05:22:12,885 | INFO     | architecture information:
[2025-06-04 01:22:31] 2025-06-04 05:22:12,886 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:22:31] 2025-06-04 05:22:12,900 | INFO     | cat /etc/os-release:
[2025-06-04 01:22:31] NAME="CentOS Linux"
[2025-06-04 01:22:31] VERSION="7 (Core)"
[2025-06-04 01:22:31] ID="centos"
[2025-06-04 01:22:31] ID_LIKE="rhel fedora"
[2025-06-04 01:22:31] VERSION_ID="7"
[2025-06-04 01:22:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:22:31] ANSI_COLOR="0;31"
[2025-06-04 01:22:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:22:31] HOME_URL="https://www.centos.org/"
[2025-06-04 01:22:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:22:31] 
[2025-06-04 01:22:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:22:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:22:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:22:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:22:31] 
[2025-06-04 01:22:31] 2025-06-04 05:22:12,900 | INFO     | **************************************
[2025-06-04 01:22:31] 2025-06-04 05:22:13,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:22:31] 2025-06-04 05:22:13,419 | INFO     | sufficient remaining disk space (56303288320 B)
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | INFO     | update_server=False
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:22:31] 2025-06-04 05:22:13,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:22:31] 2025-06-04 05:22:13,421 | INFO     | aborting loop
[2025-06-04 01:22:31] 2025-06-04 05:22:13,421 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:22:31] 2025-06-04 05:22:13,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:22:31] 2025-06-04 05:22:13,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:22:31] 2025-06-04 05:22:13,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:22:31] 2025-06-04 05:22:14,425 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:14,426 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:14,427 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:14,461 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:14,481 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:14,512 | INFO     | all data control threads have been joined
[2025-06-04 01:22:31] 2025-06-04 05:22:14,580 | INFO     | all payload control threads have been joined
[2025-06-04 01:22:31] 2025-06-04 05:22:14,590 | INFO     | all job control threads have been joined
[2025-06-04 01:22:31] 2025-06-04 05:22:14,979 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,201 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,353 | INFO     | [job] validate thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,475 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,518 | INFO     | [data] control thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,586 | INFO     | [payload] control thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,596 | INFO     | [job] control thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,611 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:15,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:16,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:22:31] 2025-06-04 05:22:20,664 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:23,703 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:22:31] 2025-06-04 05:22:24,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:22:31] 2025-06-04 05:22:26,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715519305536)>', '<ExcThread(monitor, started 140714805556992)>']
[2025-06-04 01:22:31] 2025-06-04 05:22:27,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:22:31] 2025-06-04 05:22:27,487 | INFO     | [monitor] control thread has ended
[2025-06-04 01:22:31] 2025-06-04 05:22:31,676 | INFO     | all workflow threads have been joined
[2025-06-04 01:22:31] 2025-06-04 05:22:31,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:22:31] 2025-06-04 05:22:31,677 | INFO     | traces error code: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:31,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:22:31] 2025-06-04 05:22:31,776 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:22:31] 2025-06-04 05:22:31,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:22:31] 2025-06-04 05:22:31,780 [wrapper] pilotpid: 3749675
[2025-06-04 01:22:31] 2025-06-04 05:22:31,782 [wrapper] Pilot exit status: 0
[2025-06-04 01:22:31] 2025-06-04 05:22:31,790 [wrapper] pandaids: 6678153442
[2025-06-04 01:22:31] 2025-06-04 05:22:31,825 [wrapper] cleanup supervisor_pilot 3833441 3749676
[2025-06-04 01:22:31] 2025-06-04 05:22:31,827 [wrapper] Test setup, not cleaning
[2025-06-04 01:22:31] 2025-06-04 05:22:31,829 [wrapper] apfmon messages muted
[2025-06-04 01:22:31] 2025-06-04 05:22:31,831 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:22:31] 2025-06-04 05:22:31,832 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:22:31]  *** Error codes and diagnostics ***
[2025-06-04 01:22:31]     "exeErrorCode": 0,
[2025-06-04 01:22:31]     "exeErrorDiag": "",
[2025-06-04 01:22:31]     "pilotErrorCode": 0,
[2025-06-04 01:22:31]     "pilotErrorDiag": "",
[2025-06-04 01:22:31]  *** Listing of results directory ***
[2025-06-04 01:22:31] total 392644
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:45 queuedata.json
[2025-06-04 01:22:31] -rwx------. 1 boincer umatlas     37140 Jun  3 18:45 runpilot2-wrapper.sh
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:22:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:39 run_atlas
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:39 job.xml
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas 215997541 Jun  4 00:39 EVNT.45006593._001904.pool.root.1
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:39 start_atlas.sh
[2025-06-04 01:22:31] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:39 shared
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 00:39 input.tar.gz
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:39 boinc_lockfile
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 00:39 pandaJob.out
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas    986745 Jun  4 00:39 agis_schedconf.cvmfs.json
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:22:31] drwx------. 4 boincer umatlas      4096 Jun  4 00:39 pilot3
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 01:20 init_data.xml
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas       530 Jun  4 01:21 boinc_task_state.xml
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas 181026620 Jun  4 01:21 HITS.45006595._047460.pool.root.1
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas      1036 Jun  4 01:21 memory_monitor_summary.json
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas        95 Jun  4 01:22 pilot_heartbeat.json
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas    331213 Jun  4 01:22 log.45006595._047460.job.log.tgz.1
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas      7713 Jun  4 01:22 heartbeat.json
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:22 wrapper_checkpoint.txt
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas      4548 Jun  4 01:22 pilotlog.txt
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas    277739 Jun  4 01:22 log.45006595._047460.job.log.1
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas       357 Jun  4 01:22 output.list
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:22 runtime_log
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas    624640 Jun  4 01:22 result.tar.gz
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas       649 Jun  4 01:22 s0VMDm8Ypg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyBaKDmN55AXn.diag
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 01:22 runtime_log.err
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:22 boinc_mmap_file
[2025-06-04 01:22:31] -rw-r--r--. 1 boincer umatlas     21490 Jun  4 01:22 stderr.txt
[2025-06-04 01:22:31] HITS file was successfully produced:
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas 181026620 Jun  4 01:21 shared/HITS.pool.root.1
[2025-06-04 01:22:31]  *** Contents of shared directory: ***
[2025-06-04 01:22:31] total 388852
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas 215997541 Jun  4 00:39 ATLAS.root_0
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:39 start_atlas.sh
[2025-06-04 01:22:31] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 00:39 input.tar.gz
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas 181026620 Jun  4 01:21 HITS.pool.root.1
[2025-06-04 01:22:31] -rw-------. 1 boincer umatlas    624640 Jun  4 01:22 result.tar.gz
01:22:33 (3746006): run_atlas exited; CPU time 23428.606024
01:22:33 (3746006): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN