Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:12:53 (3599359): wrapper (7.7.26015): starting
13:12:53 (3599359): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:12:53] Arguments: --nthreads 4
[2025-06-04 13:12:53] Threads: 4
[2025-06-04 13:12:53] Checking for CVMFS
[2025-06-04 13:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:12:53] 2.9.2.0 2632174 2466 95896 146778 0 55 24797747 36864001 0 130560 0 2585466 99.993 601234 29946 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:12:53] CVMFS is ok
[2025-06-04 13:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:12:53] Further information can be found at the LHC@home message board.
[2025-06-04 13:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:12:53] Checking for apptainer binary...
[2025-06-04 13:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:12:53] Running /usr/bin/apptainer --version
[2025-06-04 13:12:53] apptainer version 1.3.6-6.1
[2025-06-04 13:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:12:54] thA319
[2025-06-04 13:12:54] apptainer works
[2025-06-04 13:12:54] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:12:54] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:12:54] Starting ATLAS job with PandaID=6678155141
[2025-06-04 13:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:13:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:13:09]  guid=6227995c-1706-4413-85f7-98bdc61e284a
[2025-06-04 14:13:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:13:09]  is_altstaged=None
[2025-06-04 14:13:09]  is_tar=False
[2025-06-04 14:13:09]  lfn=log.45006595._047809.job.log.tgz.1
[2025-06-04 14:13:09]  mtime=0
[2025-06-04 14:13:09]  protocol_id=None
[2025-06-04 14:13:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:13:09]  replicas=None
[2025-06-04 14:13:09]  scope=mc23_13p6TeV
[2025-06-04 14:13:09]  status=None
[2025-06-04 14:13:09]  status_code=0
[2025-06-04 14:13:09]  storage_token=
[2025-06-04 14:13:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678155141/log.45006595._047809.job.log.tgz.1
[2025-06-04 14:13:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/98/log.45006595._047809.job.log.tgz.1
[2025-06-04 14:13:09]  workdir=None
[2025-06-04 14:13:09] ]
[2025-06-04 14:13:09] 2025-06-04 12:12:24,799 | INFO     | transferring file log.45006595._047809.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678155141/log.45006595._047809.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 14:13:09] 2025-06-04 12:12:24,799 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678155141/log.45006595._047809.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0478
[2025-06-04 14:13:09] 2025-06-04 12:12:24,819 | INFO     | adding to output.list: log.45006595._047809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/98/log.45006595._047809.job.log.tg
[2025-06-04 14:13:09] 2025-06-04 12:12:24,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:13:09] 2025-06-04 12:12:24,819 | INFO     | summary of transferred files:
[2025-06-04 14:13:09] 2025-06-04 12:12:24,819 | INFO     |  -- lfn=log.45006595._047809.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:13:09] 2025-06-04 12:12:24,819 | INFO     | stage-out finished correctly
[2025-06-04 14:13:09] 2025-06-04 12:12:25,072 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:13:09] 2025-06-04 12:12:25,111 | INFO     | job 6678155141 has state=finished
[2025-06-04 14:13:09] 2025-06-04 12:12:25,111 | INFO     | preparing for final server update for job 6678155141 in state='finished'
[2025-06-04 14:13:09] 2025-06-04 12:12:25,112 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:13:09] 2025-06-04 12:12:25,112 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:13:09] 2025-06-04 12:12:25,112 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:13:09] 2025-06-04 12:12:25,112 | INFO     | job 6678155141 has finished - writing final server update
[2025-06-04 14:13:09] 2025-06-04 12:12:25,112 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:13:09] 2025-06-04 12:12:25,113 | INFO     | executing command: lscpu
[2025-06-04 14:13:09] 2025-06-04 12:12:25,132 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:13:09] 2025-06-04 12:12:26,809 | INFO     | monitor loop #276: job 0:6678155141 is in state 'finished'
[2025-06-04 14:13:09] 2025-06-04 12:12:26,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:13:09] 2025-06-04 12:12:29,312 | INFO     | monitor loop #277: job 0:6678155141 is in state 'finished'
[2025-06-04 14:13:09] 2025-06-04 12:12:29,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:13:09] 2025-06-04 12:12:29,675 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:13:09] 2025-06-04 12:12:29,675 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678155141/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:13:09] 2025-06-04 12:12:29,676 | INFO     | extracted standard info from prmon json
[2025-06-04 14:13:09] 2025-06-04 12:12:29,676 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:13:09] 2025-06-04 12:12:29,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:13:09] 2025-06-04 12:12:29,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:13:09] 2025-06-04 12:12:29,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | sum of deviations: -5552923024.999997
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | mean x: 1749037434.0
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | mean y: 2513891.431372549
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | -- intersect: 236212802296.01077
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | intersect: 236212802296.01077
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | chi2: 0.05352667043764515
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | -- intersect: 236212802296.01077
[2025-06-04 14:13:09] 2025-06-04 12:12:29,677 | INFO     | current memory leak: -135.05 B/s (using 51 data points, chi2=0.05)
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | ..............................
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . Timing measurements:
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . get job = 0 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . initial setup = 1 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . payload setup = 4 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . stage-in = 0 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . payload execution = 3541 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . stage-out = 0 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | . log creation = 0 s
[2025-06-04 14:13:09] 2025-06-04 12:12:29,678 | INFO     | ..............................
[2025-06-04 14:13:09] 2025-06-04 12:12:30,099 | INFO     | 
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | job summary report
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | --------------------------------------------------
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | PanDA job id: 6678155141
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | task id: 45006595
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | errors: (none)
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | pilot state: finished 
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | transexitcode: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | exeerrorcode: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | exeerrordiag: 
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | exitcode: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | exitmsg: OK
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | cpuconsumptiontime: 13315 s
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | nevents: 400
[2025-06-04 14:13:09] 2025-06-04 12:12:30,100 | INFO     | neventsw: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | pid: 3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | pgrp: 3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | corecount: 4
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | event service: False
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | sizes: {0: 2405010, 1: 2405209, 4: 2405415, 11: 2405443, 3550: 2440122, 3555: 2440236}
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | --------------------------------------------------
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | 
[2025-06-04 14:13:09] 2025-06-04 12:12:30,101 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | job 6678155141 has completed (purged errors)
[2025-06-04 14:13:09] 2025-06-04 12:12:30,121 | INFO     | overall cleanup function is called
[2025-06-04 14:13:09] 2025-06-04 12:12:31,127 | INFO     | --- collectZombieJob: --- 10, [3609777]
[2025-06-04 14:13:09] 2025-06-04 12:12:31,127 | INFO     | zombie collector waiting for pid 3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:31,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:13:09] 2025-06-04 12:12:31,127 | INFO     | collected zombie processes
[2025-06-04 14:13:09] 2025-06-04 12:12:31,127 | INFO     | will attempt to kill all subprocesses of pid=3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:31,177 | INFO     | process IDs to be killed: [3609777] (in reverse order)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,212 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:13:09] 2025-06-04 12:12:31,214 | INFO     | did not find any defunct processes belonging to 3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:31,216 | INFO     | did not find any defunct processes belonging to 3609777
[2025-06-04 14:13:09] 2025-06-04 12:12:31,216 | INFO     | ready for new job
[2025-06-04 14:13:09] 2025-06-04 12:12:31,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:13:09] 2025-06-04 12:12:31,217 | INFO     | **************************************
[2025-06-04 14:13:09] 2025-06-04 12:12:31,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:13:09] 2025-06-04 12:12:31,217 | INFO     | **************************************
[2025-06-04 14:13:09] 2025-06-04 12:12:31,217 | INFO     | 
[2025-06-04 14:13:09] 2025-06-04 12:12:31,217 | INFO     | architecture information:
[2025-06-04 14:13:09] 2025-06-04 12:12:31,218 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:13:09] 2025-06-04 12:12:31,230 | INFO     | cat /etc/os-release:
[2025-06-04 14:13:09] NAME="CentOS Linux"
[2025-06-04 14:13:09] VERSION="7 (Core)"
[2025-06-04 14:13:09] ID="centos"
[2025-06-04 14:13:09] ID_LIKE="rhel fedora"
[2025-06-04 14:13:09] VERSION_ID="7"
[2025-06-04 14:13:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:13:09] ANSI_COLOR="0;31"
[2025-06-04 14:13:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:13:09] HOME_URL="https://www.centos.org/"
[2025-06-04 14:13:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:13:09] 
[2025-06-04 14:13:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:13:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:13:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:13:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:13:09] 
[2025-06-04 14:13:09] 2025-06-04 12:12:31,231 | INFO     | **************************************
[2025-06-04 14:13:09] 2025-06-04 12:12:31,733 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:13:09] 2025-06-04 12:12:31,747 | INFO     | sufficient remaining disk space (326684901376 B)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | INFO     | update_server=False
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:13:09] 2025-06-04 12:12:31,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:13:09] 2025-06-04 12:12:31,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:13:09] 2025-06-04 12:12:31,815 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:13:09] 2025-06-04 12:12:31,816 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:13:09] 2025-06-04 12:12:31,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:13:09] 2025-06-04 12:12:31,816 | INFO     | will abort loop
[2025-06-04 14:13:09] 2025-06-04 12:12:31,964 | INFO     | all data control threads have been joined
[2025-06-04 14:13:09] 2025-06-04 12:12:32,205 | INFO     | all job control threads have been joined
[2025-06-04 14:13:09] 2025-06-04 12:12:32,753 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,753 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,756 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,821 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:13:09] 2025-06-04 12:12:32,942 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,969 | INFO     | [data] control thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:32,982 | INFO     | all payload control threads have been joined
[2025-06-04 14:13:09] 2025-06-04 12:12:33,047 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:33,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:33,210 | INFO     | [job] control thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:33,481 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:33,569 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:33,987 | INFO     | [payload] control thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:34,090 | INFO     | [job] validate thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:34,729 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:13:09] 2025-06-04 12:12:34,874 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:35,734 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:35,754 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:13:09] 2025-06-04 12:12:36,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139776864147264)>', '<ExcThread(monitor, started 139775977694976)>']
[2025-06-04 14:13:09] 2025-06-04 12:12:36,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:13:09] 2025-06-04 12:12:36,774 | INFO     | [monitor] control thread has ended
[2025-06-04 14:13:09] 2025-06-04 12:12:41,373 | INFO     | all workflow threads have been joined
[2025-06-04 14:13:09] 2025-06-04 12:12:41,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:13:09] 2025-06-04 12:12:41,374 | INFO     | traces error code: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:41,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:13:09] 2025-06-04 12:12:41,445 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:13:09] 2025-06-04 12:12:41,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:13:09] 2025-06-04 12:12:41,454 [wrapper] pilotpid: 3603080
[2025-06-04 14:13:09] 2025-06-04 12:12:41,457 [wrapper] Pilot exit status: 0
[2025-06-04 14:13:09] 2025-06-04 12:12:41,469 [wrapper] pandaids: 6678155141
[2025-06-04 14:13:09] 2025-06-04 12:12:41,494 [wrapper] cleanup supervisor_pilot 3619514 3603081
[2025-06-04 14:13:09] 2025-06-04 12:12:41,498 [wrapper] Test setup, not cleaning
[2025-06-04 14:13:09] 2025-06-04 12:12:41,502 [wrapper] apfmon messages muted
[2025-06-04 14:13:09] 2025-06-04 12:12:41,506 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:13:09] 2025-06-04 12:12:41,510 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:13:09]  *** Error codes and diagnostics ***
[2025-06-04 14:13:09]     "exeErrorCode": 0,
[2025-06-04 14:13:09]     "exeErrorDiag": "",
[2025-06-04 14:13:09]     "pilotErrorCode": 0,
[2025-06-04 14:13:09]     "pilotErrorDiag": "",
[2025-06-04 14:13:09]  *** Listing of results directory ***
[2025-06-04 14:13:09] total 380932
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 14:13:09] -rwx------ 1 boinc boinc     37140 Jun  4 00:58 runpilot2-wrapper.sh
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:58 queuedata.json
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:13:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:12 run_atlas
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:12 job.xml
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc 214805698 Jun  4 13:12 EVNT.45006593._001920.pool.root.1
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc      6853 Jun  4 13:12 init_data.xml
[2025-06-04 14:13:09] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:12 shared
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:12 input.tar.gz
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:12 start_atlas.sh
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:12 boinc_lockfile
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc      2522 Jun  4 13:12 pandaJob.out
[2025-06-04 14:13:09] -rw------- 1 boinc boinc    986812 Jun  4 13:12 agis_schedconf.cvmfs.json
[2025-06-04 14:13:09] -rw------- 1 boinc boinc   1603667 Jun  4 13:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:13:09] drwx------ 4 boinc boinc      4096 Jun  4 13:13 pilot3
[2025-06-04 14:13:09] -rw------- 1 boinc boinc 170286496 Jun  4 14:12 HITS.45006595._047809.pool.root.1
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:12 boinc_task_state.xml
[2025-06-04 14:13:09] -rw------- 1 boinc boinc        95 Jun  4 14:12 pilot_heartbeat.json
[2025-06-04 14:13:09] -rw------- 1 boinc boinc      1019 Jun  4 14:12 memory_monitor_summary.json
[2025-06-04 14:13:09] -rw------- 1 boinc boinc    216003 Jun  4 14:12 log.45006595._047809.job.log.tgz.1
[2025-06-04 14:13:09] -rw------- 1 boinc boinc      7656 Jun  4 14:12 heartbeat.json
[2025-06-04 14:13:09] -rw------- 1 boinc boinc      4666 Jun  4 14:12 pilotlog.txt
[2025-06-04 14:13:09] -rw------- 1 boinc boinc    360361 Jun  4 14:12 log.45006595._047809.job.log.1
[2025-06-04 14:13:09] -rw------- 1 boinc boinc       357 Jun  4 14:12 output.list
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:12 runtime_log
[2025-06-04 14:13:09] -rw------- 1 boinc boinc    593920 Jun  4 14:12 result.tar.gz
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc      8733 Jun  4 14:12 runtime_log.err
[2025-06-04 14:13:09] -rw------- 1 boinc boinc       657 Jun  4 14:12 MjkMDmPlpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgDaKDm6yquAo.diag
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:13 boinc_mmap_file
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:13 wrapper_checkpoint.txt
[2025-06-04 14:13:09] -rw-r--r-- 1 boinc boinc     21275 Jun  4 14:13 stderr.txt
[2025-06-04 14:13:09] HITS file was successfully produced:
[2025-06-04 14:13:09] -rw------- 1 boinc boinc 170286496 Jun  4 14:12 shared/HITS.pool.root.1
[2025-06-04 14:13:09]  *** Contents of shared directory: ***
[2025-06-04 14:13:09] total 377172
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc 214805698 Jun  4 13:12 ATLAS.root_0
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:12 input.tar.gz
[2025-06-04 14:13:09] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:12 start_atlas.sh
[2025-06-04 14:13:09] -rw------- 1 boinc boinc 170286496 Jun  4 14:12 HITS.pool.root.1
[2025-06-04 14:13:09] -rw------- 1 boinc boinc    593920 Jun  4 14:12 result.tar.gz
14:13:11 (3599359): run_atlas exited; CPU time 13328.493750
14:13:11 (3599359): called boinc_finish(0)

</stderr_txt>
]]>

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