Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:26 (2336761): wrapper (7.7.26015): starting
14:48:26 (2336761): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:48:26] Arguments: --nthreads 8
[2025-06-04 14:48:26] Threads: 8
[2025-06-04 14:48:26] Checking for CVMFS
[2025-06-04 14:48:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:48:26] 2.12.7.0 1328384 2587 72760 146780 0 56 3002679 4096001 0 65024 0 2502275 99.993 605042 2353 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 14:48:26] CVMFS is ok
[2025-06-04 14:48:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:48:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:48:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 14:48:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 14:48:26] Further information can be found at the LHC@home message board.
[2025-06-04 14:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:48:26] Checking for apptainer binary...
[2025-06-04 14:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:48:26] Running /usr/bin/apptainer --version
[2025-06-04 14:48:26] apptainer version 1.3.6-1.el8
[2025-06-04 14:48:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:48:27] localhost.localdomain
[2025-06-04 14:48:27] apptainer works
[2025-06-04 14:48:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:48:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:48:27] Starting ATLAS job with PandaID=6678154319
[2025-06-04 14:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:58:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:58:17]  replicas=None
[2025-06-04 15:58:17]  scope=mc23_13p6TeV
[2025-06-04 15:58:17]  status=None
[2025-06-04 15:58:17]  status_code=0
[2025-06-04 15:58:17]  storage_token=
[2025-06-04 15:58:17]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678154319/log.45006595._047639.job.log.tgz.1
[2025-06-04 15:58:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/58/log.45006595._047639.job.log.tgz.1
[2025-06-04 15:58:17]  workdir=None
[2025-06-04 15:58:17] ]
[2025-06-04 15:58:17] 2025-06-04 13:57:47,178 | INFO     | transferring file log.45006595._047639.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678154319/log.45006595._047639.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 15:58:17] 2025-06-04 13:57:47,178 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678154319/log.45006595._047639.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._047639.job
[2025-06-04 15:58:17] 2025-06-04 13:57:47,190 | INFO     | adding to output.list: log.45006595._047639.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/58/log.45006595._047639.job.log.tg
[2025-06-04 15:58:17] 2025-06-04 13:57:47,190 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:58:17] 2025-06-04 13:57:47,191 | INFO     | summary of transferred files:
[2025-06-04 15:58:17] 2025-06-04 13:57:47,191 | INFO     |  -- lfn=log.45006595._047639.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:58:17] 2025-06-04 13:57:47,191 | INFO     | stage-out finished correctly
[2025-06-04 15:58:17] 2025-06-04 13:57:47,707 | WARNING  | process 2346840 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:58:17] 2025-06-04 13:57:47,707 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678154319/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:58:17] 2025-06-04 13:57:47,769 | INFO     | number of running child processes to parent process 2346840: 1
[2025-06-04 15:58:17] 2025-06-04 13:57:47,770 | INFO     | maximum number of monitored processes: 6
[2025-06-04 15:58:17] 2025-06-04 13:57:50,142 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:58:17] 2025-06-04 13:57:50,273 | INFO     | monitor loop #311: job 0:6678154319 is in state 'finished'
[2025-06-04 15:58:17] 2025-06-04 13:57:50,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:58:17] 2025-06-04 13:57:52,776 | INFO     | monitor loop #312: job 0:6678154319 is in state 'finished'
[2025-06-04 15:58:17] 2025-06-04 13:57:52,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:58:17] 2025-06-04 13:57:53,012 | INFO     | job 6678154319 has state=finished
[2025-06-04 15:58:17] 2025-06-04 13:57:53,012 | INFO     | preparing for final server update for job 6678154319 in state='finished'
[2025-06-04 15:58:17] 2025-06-04 13:57:53,013 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:58:17] 2025-06-04 13:57:53,013 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:58:17] 2025-06-04 13:57:53,013 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:58:17] 2025-06-04 13:57:53,013 | INFO     | job 6678154319 has finished - writing final server update
[2025-06-04 15:58:17] 2025-06-04 13:57:53,013 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:58:17] 2025-06-04 13:57:53,014 | INFO     | executing command: lscpu
[2025-06-04 15:58:17] 2025-06-04 13:57:53,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:58:17] 2025-06-04 13:57:55,279 | INFO     | monitor loop #313: job 0:6678154319 is in state 'finished'
[2025-06-04 15:58:17] 2025-06-04 13:57:55,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:58:17] 2025-06-04 13:57:57,783 | INFO     | monitor loop #314: job 0:6678154319 is in state 'finished'
[2025-06-04 15:58:17] 2025-06-04 13:57:57,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,632 | INFO     | PID=2340418 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 15:58:17] 2025-06-04 13:57:58,723 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:58:17] 2025-06-04 13:57:58,724 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678154319/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,724 | INFO     | extracted standard info from prmon json
[2025-06-04 15:58:17] 2025-06-04 13:57:58,724 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:58:17] 2025-06-04 13:57:58,724 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:58:17] 2025-06-04 13:57:58,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:58:17] 2025-06-04 13:57:58,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | sum of square deviations: 70364110.0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | sum of deviations: -11234679086.999998
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | mean x: 1749043471.0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | mean y: 2785498.6393442624
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | -- intersect: 279263648826.5147
[2025-06-04 15:58:17] 2025-06-04 13:57:58,726 | INFO     | intersect: 279263648826.5147
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | chi2: 0.10560881828417146
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | -- intersect: 279263648826.5147
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | current memory leak: -159.66 B/s (using 61 data points, chi2=0.11)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | ..............................
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . Timing measurements:
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . get job = 0 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . initial setup = 1 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . payload setup = 4 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . stage-in = 0 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,727 | INFO     | . payload execution = 4131 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,728 | INFO     | . stage-out = 0 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,728 | INFO     | . log creation = 0 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,728 | INFO     | ..............................
[2025-06-04 15:58:17] 2025-06-04 13:57:58,966 | INFO     | 
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | job summary report
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | --------------------------------------------------
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | PanDA job id: 6678154319
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | task id: 45006595
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | errors: (none)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | pilot state: finished 
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | transexitcode: 0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | exeerrorcode: 0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | exeerrordiag: 
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | exitcode: 0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | exitmsg: OK
[2025-06-04 15:58:17] 2025-06-04 13:57:58,967 | INFO     | cpuconsumptiontime: 29587 s
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | nevents: 400
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | neventsw: 0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | pid: 2346840
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | pgrp: 2346840
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | corecount: 8
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | event service: False
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | sizes: {0: 2397171, 1: 2397370, 4: 2397576, 11: 2397604, 4138: 2423478, 4139: 2432602, 4142: 2432602, 4151: 2432772}
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | --------------------------------------------------
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | 
[2025-06-04 15:58:17] 2025-06-04 13:57:58,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 15:58:17] 2025-06-04 13:57:58,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:58:17] 2025-06-04 13:57:58,983 | INFO     | job 6678154319 has completed (purged errors)
[2025-06-04 15:58:17] 2025-06-04 13:57:58,983 | INFO     | overall cleanup function is called
[2025-06-04 15:58:17] 2025-06-04 13:57:59,990 | INFO     | --- collectZombieJob: --- 10, [2346840]
[2025-06-04 15:58:17] 2025-06-04 13:57:59,990 | INFO     | zombie collector waiting for pid 2346840
[2025-06-04 15:58:17] 2025-06-04 13:57:59,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:58:17] 2025-06-04 13:57:59,990 | INFO     | collected zombie processes
[2025-06-04 15:58:17] 2025-06-04 13:57:59,990 | INFO     | will attempt to kill all subprocesses of pid=2346840
[2025-06-04 15:58:17] 2025-06-04 13:58:00,065 | INFO     | process IDs to be killed: [2346840] (in reverse order)
[2025-06-04 15:58:17] 2025-06-04 13:58:00,092 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:58:17] 2025-06-04 13:58:00,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:58:17] 2025-06-04 13:58:00,094 | INFO     | did not find any defunct processes belonging to 2346840
[2025-06-04 15:58:17] 2025-06-04 13:58:00,096 | INFO     | did not find any defunct processes belonging to 2346840
[2025-06-04 15:58:17] 2025-06-04 13:58:00,096 | INFO     | ready for new job
[2025-06-04 15:58:17] 2025-06-04 13:58:00,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | **************************************
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | **************************************
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | 
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | pilot is running in a VM
[2025-06-04 15:58:17] 2025-06-04 13:58:00,097 | INFO     | architecture information:
[2025-06-04 15:58:17] 2025-06-04 13:58:00,098 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:58:17] 2025-06-04 13:58:00,106 | INFO     | cat /etc/os-release:
[2025-06-04 15:58:17] NAME="CentOS Linux"
[2025-06-04 15:58:17] VERSION="7 (Core)"
[2025-06-04 15:58:17] ID="centos"
[2025-06-04 15:58:17] ID_LIKE="rhel fedora"
[2025-06-04 15:58:17] VERSION_ID="7"
[2025-06-04 15:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:58:17] ANSI_COLOR="0;31"
[2025-06-04 15:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:58:17] HOME_URL="https://www.centos.org/"
[2025-06-04 15:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:58:17] 
[2025-06-04 15:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:58:17] 
[2025-06-04 15:58:17] 2025-06-04 13:58:00,106 | INFO     | **************************************
[2025-06-04 15:58:17] 2025-06-04 13:58:00,609 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 15:58:17] 2025-06-04 13:58:00,621 | INFO     | sufficient remaining disk space (41275097088 B)
[2025-06-04 15:58:17] 2025-06-04 13:58:00,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:58:17] 2025-06-04 13:58:00,621 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:58:17] 2025-06-04 13:58:00,621 | INFO     | update_server=False
[2025-06-04 15:58:17] 2025-06-04 13:58:00,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:58:17] 2025-06-04 13:58:00,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:58:17] 2025-06-04 13:58:00,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:58:17] 2025-06-04 13:58:00,637 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:58:17] 2025-06-04 13:58:00,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:58:17] 2025-06-04 13:58:00,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:58:17] 2025-06-04 13:58:00,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:58:17] 2025-06-04 13:58:01,266 | INFO     | all data control threads have been joined
[2025-06-04 15:58:17] 2025-06-04 13:58:01,278 | INFO     | all payload control threads have been joined
[2025-06-04 15:58:17] 2025-06-04 13:58:01,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:58:17] 2025-06-04 13:58:01,293 | INFO     | aborting loop
[2025-06-04 15:58:17] 2025-06-04 13:58:01,627 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:01,627 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:01,806 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:01,987 | INFO     | all job control threads have been joined
[2025-06-04 15:58:17] 2025-06-04 13:58:02,105 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,271 | INFO     | [data] control thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,273 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,284 | INFO     | [payload] control thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,297 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,511 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,627 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,806 | INFO     | [job] validate thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:02,993 | INFO     | [job] control thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:03,062 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:03,103 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:04,713 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:10,725 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:58:17] 2025-06-04 13:58:11,730 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:58:17] 2025-06-04 13:58:12,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254785132352)>', '<ExcThread(monitor, started 140254346462976)>']
[2025-06-04 15:58:17] 2025-06-04 13:58:12,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:58:17] 2025-06-04 13:58:12,699 | INFO     | [monitor] control thread has ended
[2025-06-04 15:58:17] 2025-06-04 13:58:17,249 | INFO     | all workflow threads have been joined
[2025-06-04 15:58:17] 2025-06-04 13:58:17,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:58:17] 2025-06-04 13:58:17,249 | INFO     | traces error code: 0
[2025-06-04 15:58:17] 2025-06-04 13:58:17,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:58:17] 2025-06-04 13:58:17,323 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:58:17] 2025-06-04 13:58:17,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:58:17] 2025-06-04 13:58:17,327 [wrapper] pilotpid: 2340418
[2025-06-04 15:58:17] 2025-06-04 13:58:17,329 [wrapper] Pilot exit status: 0
[2025-06-04 15:58:17] 2025-06-04 13:58:17,339 [wrapper] pandaids: 6678154319
[2025-06-04 15:58:17] 2025-06-04 13:58:17,359 [wrapper] cleanup supervisor_pilot 2358287 2340419
[2025-06-04 15:58:17] 2025-06-04 13:58:17,361 [wrapper] Test setup, not cleaning
[2025-06-04 15:58:17] 2025-06-04 13:58:17,364 [wrapper] apfmon messages muted
[2025-06-04 15:58:17] 2025-06-04 13:58:17,366 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:58:17] 2025-06-04 13:58:17,369 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:58:17]  *** Error codes and diagnostics ***
[2025-06-04 15:58:17]     "exeErrorCode": 0,
[2025-06-04 15:58:17]     "exeErrorDiag": "",
[2025-06-04 15:58:17]     "pilotErrorCode": 0,
[2025-06-04 15:58:17]     "pilotErrorDiag": "",
[2025-06-04 15:58:17]  *** Listing of results directory ***
[2025-06-04 15:58:17] total 396272
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 15:58:17] -rwx------. 1 boinc boinc     37140 Jun  4 00:51 runpilot2-wrapper.sh
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:51 queuedata.json
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:58:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:48 run_atlas
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:48 job.xml
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc 217175630 Jun  4 14:48 EVNT.45006593._001912.pool.root.1
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:48 start_atlas.sh
[2025-06-04 15:58:17] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:48 shared
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:48 input.tar.gz
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc      6076 Jun  4 14:48 init_data.xml
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:48 boinc_lockfile
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:48 pandaJob.out
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc    986811 Jun  4 14:48 agis_schedconf.cvmfs.json
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc   1598969 Jun  4 14:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:58:17] drwx------. 4 boinc boinc      4096 Jun  4 14:48 pilot3
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc 183397150 Jun  4 15:57 HITS.45006595._047639.pool.root.1
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc        95 Jun  4 15:57 pilot_heartbeat.json
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc       529 Jun  4 15:57 boinc_task_state.xml
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc      1036 Jun  4 15:57 memory_monitor_summary.json
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc    289911 Jun  4 15:57 log.45006595._047639.job.log.tgz.1
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc      7738 Jun  4 15:57 heartbeat.json
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:58 boinc_mmap_file
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc        27 Jun  4 15:58 wrapper_checkpoint.txt
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc      4487 Jun  4 15:58 pilotlog.txt
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc    405538 Jun  4 15:58 log.45006595._047639.job.log.1
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc       357 Jun  4 15:58 output.list
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:58 runtime_log
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc    716800 Jun  4 15:58 result.tar.gz
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc      8662 Jun  4 15:58 runtime_log.err
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc       663 Jun  4 15:58 RqWMDmTepg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8BaKDmoEEqLm.diag
[2025-06-04 15:58:17] -rw-r--r--. 1 boinc boinc     22053 Jun  4 15:58 stderr.txt
[2025-06-04 15:58:17] HITS file was successfully produced:
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc 183397150 Jun  4 15:57 shared/HITS.pool.root.1
[2025-06-04 15:58:17]  *** Contents of shared directory: ***
[2025-06-04 15:58:17] total 392404
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc 217175630 Jun  4 14:48 ATLAS.root_0
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:48 start_atlas.sh
[2025-06-04 15:58:17] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:48 input.tar.gz
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc 183397150 Jun  4 15:57 HITS.pool.root.1
[2025-06-04 15:58:17] -rw-------. 1 boinc boinc    716800 Jun  4 15:58 result.tar.gz
15:58:18 (2336761): run_atlas exited; CPU time 29609.591723
15:58:18 (2336761): called boinc_finish(0)

</stderr_txt>
]]>

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