Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:54 (682105): wrapper (7.7.26015): starting
16:47:54 (682105): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:47:54] Arguments: --nthreads 4
[2025-06-05 16:47:54] Threads: 4
[2025-06-05 16:47:54] Checking for CVMFS
[2025-06-05 16:47:54] No cvmfs_config command found, will try listing directly
[2025-06-05 16:47:54] CVMFS is ok
[2025-06-05 16:47:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:47:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:47:54] Further information can be found at the LHC@home message board.
[2025-06-05 16:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:47:54] Checking for apptainer binary...
[2025-06-05 16:47:54] which: no apptainer in ((null))
[2025-06-05 16:47:54] apptainer is not installed, using version from CVMFS
[2025-06-05 16:47:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:47:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 16:47:54] apptainer works
[2025-06-05 16:47:54] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:47:54] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:47:54] Starting ATLAS job with PandaID=6678154371
[2025-06-05 16:47:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:56:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:56:35] 2025-06-05 16:55:25,429 | INFO     | executing command: lscpu
[2025-06-05 18:56:35] 2025-06-05 16:55:25,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 18:56:35] 2025-06-05 16:55:27,431 | INFO     | monitor loop #536: job 0:6678154371 is in state 'finished'
[2025-06-05 18:56:35] 2025-06-05 16:55:27,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:56:35] 2025-06-05 16:55:29,935 | INFO     | monitor loop #537: job 0:6678154371 is in state 'finished'
[2025-06-05 18:56:35] 2025-06-05 16:55:29,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,867 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 18:56:35] 2025-06-05 16:55:31,867 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6678154371/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,868 | INFO     | extracted standard info from prmon json
[2025-06-05 18:56:35] 2025-06-05 16:55:31,868 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:56:35] 2025-06-05 16:55:31,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:56:35] 2025-06-05 16:55:31,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:56:35] 2025-06-05 16:55:31,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:56:35] 2025-06-05 16:55:31,871 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:56:35] 2025-06-05 16:55:31,871 | INFO     | sum of square deviations: 605592750.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,871 | INFO     | sum of deviations: 14868111268.999998
[2025-06-05 18:56:35] 2025-06-05 16:55:31,871 | INFO     | mean x: 1749138702.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,872 | INFO     | mean y: 2292417.392
[2025-06-05 18:56:35] 2025-06-05 16:55:31,872 | INFO     | -- intersect: -42941400099.15518
[2025-06-05 18:56:35] 2025-06-05 16:55:31,872 | INFO     | intersect: -42941400099.15518
[2025-06-05 18:56:35] 2025-06-05 16:55:31,872 | INFO     | chi2: 1.6303740699768687
[2025-06-05 18:56:35] 2025-06-05 16:55:31,872 | INFO     | sum of square deviations: 535786790.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | sum of deviations: 14294949992.5
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | mean x: 1749138549.5
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | mean y: 2291164.558333333
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | -- intersect: -46665242566.64188
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | intersect: -46665242566.64188
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | chi2: 1.6331413954857097
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | current chi2=1.6331413954857097 (change=-0.16973561833452236 %)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,873 | INFO     | right removable region: 119
[2025-06-05 18:56:35] 2025-06-05 16:55:31,874 | INFO     | sum of square deviations: 535786790.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,874 | INFO     | sum of deviations: -4128086946.5
[2025-06-05 18:56:35] 2025-06-05 16:55:31,874 | INFO     | mean x: 1749138854.5
[2025-06-05 18:56:35] 2025-06-05 16:55:31,874 | INFO     | mean y: 2333202.1416666666
[2025-06-05 18:56:35] 2025-06-05 16:55:31,875 | INFO     | -- intersect: 13478957500.544792
[2025-06-05 18:56:35] 2025-06-05 16:55:31,875 | INFO     | intersect: 13478957500.544792
[2025-06-05 18:56:35] 2025-06-05 16:55:31,875 | INFO     | chi2: 0.014256855005415963
[2025-06-05 18:56:35] 2025-06-05 16:55:31,875 | INFO     | current chi2=0.014256855005415963 (change=99.12554699759066 %)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,875 | INFO     | sum of square deviations: 471562330.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | sum of deviations: -3967113100.999999
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | mean x: 1749139007.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | mean y: 2332773.9043478263
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | -- intersect: 14717317047.85988
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | intersect: 14717317047.85988
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | chi2: 0.011171302661571148
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | current chi2=0.011171302661571148 (change=21.64258767219461 %)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,876 | INFO     | left removable region: 20
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | sum of deviations: -1657251538.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | mean x: 1749139129.0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | mean y: 2326943.98989899
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | -- intersect: 9637801118.334513
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | intersect: 9637801118.334513
[2025-06-05 18:56:35] 2025-06-05 16:55:31,877 | INFO     | chi2: 0.007449605995414151
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | -- intersect: 9637801118.334513
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | current memory leak: -5.51 B/s (using 99 data points, chi2=0.01)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | ..............................
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . Timing measurements:
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . get job = 0 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . initial setup = 1 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . payload setup = 9 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . stage-in = 0 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . payload execution = 7602 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . stage-out = 0 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,878 | INFO     | . log creation = 0 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,879 | INFO     | ..............................
[2025-06-05 18:56:35] 2025-06-05 16:55:31,972 | INFO     | 
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | job summary report
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | --------------------------------------------------
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | PanDA job id: 6678154371
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | task id: 45006595
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | errors: (none)
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | pilot state: finished 
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | transexitcode: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | exeerrorcode: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | exeerrordiag: 
[2025-06-05 18:56:35] 2025-06-05 16:55:31,973 | INFO     | exitcode: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | exitmsg: OK
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | cpuconsumptiontime: 28596 s
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | nevents: 400
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | neventsw: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | pid: 693661
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | pgrp: 693661
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | corecount: 4
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | event service: False
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | sizes: {0: 2396514, 1: 2397382, 7: 2397588, 12: 2397616, 7615: 2425218, 7617: 2434183, 7619: 2434367, 7627: 2434537}
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | --------------------------------------------------
[2025-06-05 18:56:35] 2025-06-05 16:55:31,974 | INFO     | 
[2025-06-05 18:56:35] 2025-06-05 16:55:31,975 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-06-05 18:56:35] 2025-06-05 16:55:32,003 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,003 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | job 6678154371 has completed (purged errors)
[2025-06-05 18:56:35] 2025-06-05 16:55:32,005 | INFO     | overall cleanup function is called
[2025-06-05 18:56:35] 2025-06-05 16:55:33,014 | INFO     | --- collectZombieJob: --- 10, [693661]
[2025-06-05 18:56:35] 2025-06-05 16:55:33,014 | INFO     | zombie collector waiting for pid 693661
[2025-06-05 18:56:35] 2025-06-05 16:55:33,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:56:35] 2025-06-05 16:55:33,014 | INFO     | collected zombie processes
[2025-06-05 18:56:35] 2025-06-05 16:55:33,015 | INFO     | will attempt to kill all subprocesses of pid=693661
[2025-06-05 18:56:35] 2025-06-05 16:55:33,643 | INFO     | process IDs to be killed: [693661] (in reverse order)
[2025-06-05 18:56:35] 2025-06-05 16:55:33,879 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:56:35] 2025-06-05 16:55:33,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:56:35] 2025-06-05 16:55:33,908 | INFO     | did not find any defunct processes belonging to 693661
[2025-06-05 18:56:35] 2025-06-05 16:55:33,935 | INFO     | did not find any defunct processes belonging to 693661
[2025-06-05 18:56:35] 2025-06-05 16:55:33,935 | INFO     | ready for new job
[2025-06-05 18:56:35] 2025-06-05 16:55:33,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:56:35] 2025-06-05 16:55:33,937 | INFO     | **************************************
[2025-06-05 18:56:35] 2025-06-05 16:55:33,937 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:56:35] 2025-06-05 16:55:33,937 | INFO     | **************************************
[2025-06-05 18:56:35] 2025-06-05 16:55:33,937 | INFO     | 
[2025-06-05 18:56:35] 2025-06-05 16:55:33,944 | INFO     | architecture information:
[2025-06-05 18:56:35] 2025-06-05 16:55:33,944 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:56:35] 2025-06-05 16:55:33,967 | INFO     | cat /etc/os-release:
[2025-06-05 18:56:35] NAME="CentOS Linux"
[2025-06-05 18:56:35] VERSION="7 (Core)"
[2025-06-05 18:56:35] ID="centos"
[2025-06-05 18:56:35] ID_LIKE="rhel fedora"
[2025-06-05 18:56:35] VERSION_ID="7"
[2025-06-05 18:56:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:56:35] ANSI_COLOR="0;31"
[2025-06-05 18:56:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:56:35] HOME_URL="https://www.centos.org/"
[2025-06-05 18:56:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:56:35] 
[2025-06-05 18:56:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:56:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:56:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:56:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:56:35] 
[2025-06-05 18:56:35] 2025-06-05 16:55:33,968 | INFO     | **************************************
[2025-06-05 18:56:35] 2025-06-05 16:55:34,472 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-06-05 18:56:35] 2025-06-05 16:55:34,496 | INFO     | sufficient remaining disk space (3278228160512 B)
[2025-06-05 18:56:35] 2025-06-05 16:55:34,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:56:35] 2025-06-05 16:55:34,496 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:56:35] 2025-06-05 16:55:34,496 | INFO     | update_server=False
[2025-06-05 18:56:35] 2025-06-05 16:55:34,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:56:35] 2025-06-05 16:55:34,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:56:35] 2025-06-05 16:55:34,575 | INFO     | all payload control threads have been joined
[2025-06-05 18:56:35] 2025-06-05 16:55:34,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:56:35] 2025-06-05 16:55:34,946 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 18:56:35] 2025-06-05 16:55:34,946 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 18:56:35] 2025-06-05 16:55:34,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:56:35] 2025-06-05 16:55:34,947 | INFO     | will abort loop
[2025-06-05 18:56:35] 2025-06-05 16:55:35,169 | INFO     | all data control threads have been joined
[2025-06-05 18:56:35] 2025-06-05 16:55:35,435 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:56:35] 2025-06-05 16:55:35,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:56:35] 2025-06-05 16:55:35,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:56:35] 2025-06-05 16:55:35,501 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:35,581 | INFO     | [payload] control thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:35,634 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:35,697 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:35,739 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:35,952 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,175 | INFO     | [data] control thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,178 | INFO     | all job control threads have been joined
[2025-06-05 18:56:35] 2025-06-05 16:55:36,666 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,804 | INFO     | [job] validate thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,834 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,965 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:36,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:56:35] 2025-06-05 16:55:36,998 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:37,183 | INFO     | [job] control thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:37,989 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:38,503 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:56:35] 2025-06-05 16:55:40,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23266841777984)>', '<ExcThread(monitor, started 23266592761600)>']
[2025-06-05 18:56:35] 2025-06-05 16:55:40,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:56:35] 2025-06-05 16:55:40,460 | INFO     | [monitor] control thread has ended
[2025-06-05 18:56:35] 2025-06-05 16:55:45,416 | INFO     | all workflow threads have been joined
[2025-06-05 18:56:35] 2025-06-05 16:55:45,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:56:35] 2025-06-05 16:55:45,417 | INFO     | traces error code: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:45,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:56:35] 2025-06-05 16:55:45,550 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:56:35] 2025-06-05 16:55:45,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:56:35] 2025-06-05 16:55:45,557 [wrapper] pilotpid: 686108
[2025-06-05 18:56:35] 2025-06-05 16:55:45,561 [wrapper] Pilot exit status: 0
[2025-06-05 18:56:35] 2025-06-05 16:55:45,575 [wrapper] pandaids: 6678154371
[2025-06-05 18:56:35] 2025-06-05 16:55:45,715 [wrapper] cleanup supervisor_pilot 1117337 686109
[2025-06-05 18:56:35] 2025-06-05 16:55:45,720 [wrapper] Test setup, not cleaning
[2025-06-05 18:56:35] 2025-06-05 16:55:45,723 [wrapper] apfmon messages muted
[2025-06-05 18:56:35] 2025-06-05 16:55:45,727 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:56:35] 2025-06-05 16:55:45,731 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:56:35]  *** Error codes and diagnostics ***
[2025-06-05 18:56:35]     "exeErrorCode": 0,
[2025-06-05 18:56:35]     "exeErrorDiag": "",
[2025-06-05 18:56:35]     "pilotErrorCode": 0,
[2025-06-05 18:56:35]     "pilotErrorDiag": "",
[2025-06-05 18:56:35]  *** Listing of results directory ***
[2025-06-05 18:56:35] total 390828
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:55 queuedata.json
[2025-06-05 18:56:35] -rwx------ 1 boinc boinc     37140 Jun  4 00:55 runpilot2-wrapper.sh
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:56:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:47 run_atlas
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:47 job.xml
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc 215689064 Jun  5 16:47 EVNT.45006593._001914.pool.root.1
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc      6687 Jun  5 16:47 init_data.xml
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:47 start_atlas.sh
[2025-06-05 18:56:35] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:47 shared
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc    508878 Jun  5 16:47 input.tar.gz
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:47 boinc_lockfile
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc      2525 Jun  5 16:47 pandaJob.out
[2025-06-05 18:56:35] -rw------- 1 boinc boinc    983210 Jun  5 16:48 agis_schedconf.cvmfs.json
[2025-06-05 18:56:35] -rw------- 1 boinc boinc   1598969 Jun  5 16:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:56:35] drwx------ 4 boinc boinc      4096 Jun  5 16:48 pilot3
[2025-06-05 18:56:35] -rw------- 1 boinc boinc 178698990 Jun  5 18:54 HITS.45006595._047691.pool.root.1
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc       529 Jun  5 18:55 boinc_task_state.xml
[2025-06-05 18:56:35] -rw------- 1 boinc boinc        95 Jun  5 18:55 pilot_heartbeat.json
[2025-06-05 18:56:35] -rw------- 1 boinc boinc      1030 Jun  5 18:55 memory_monitor_summary.json
[2025-06-05 18:56:35] -rw------- 1 boinc boinc    267754 Jun  5 18:55 log.45006595._047691.job.log.tgz.1
[2025-06-05 18:56:35] -rw------- 1 boinc boinc      7698 Jun  5 18:55 heartbeat.json
[2025-06-05 18:56:35] -rw------- 1 boinc boinc      4551 Jun  5 18:55 pilotlog.txt
[2025-06-05 18:56:35] -rw------- 1 boinc boinc    724361 Jun  5 18:55 log.45006595._047691.job.log.1
[2025-06-05 18:56:35] -rw------- 1 boinc boinc       357 Jun  5 18:55 output.list
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:55 runtime_log
[2025-06-05 18:56:35] -rw------- 1 boinc boinc   1013760 Jun  5 18:55 result.tar.gz
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc      9040 Jun  5 18:55 runtime_log.err
[2025-06-05 18:56:35] -rw------- 1 boinc boinc       662 Jun  5 18:55 9njNDm3ipg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYCaKDmaRKQ9n.diag
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc        27 Jun  5 18:56 wrapper_checkpoint.txt
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:56 boinc_mmap_file
[2025-06-05 18:56:35] -rw-r--r-- 1 boinc boinc     20891 Jun  5 18:56 stderr.txt
[2025-06-05 18:56:35] HITS file was successfully produced:
[2025-06-05 18:56:35] -rw------- 1 boinc boinc 178698990 Jun  5 18:54 shared/HITS.pool.root.1
[2025-06-05 18:56:35]  *** Contents of shared directory: ***
[2025-06-05 18:56:35] total 386664
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc 215689064 Jun  5 16:47 ATLAS.root_0
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:47 start_atlas.sh
[2025-06-05 18:56:35] -rw-r--r-- 2 boinc boinc    508878 Jun  5 16:47 input.tar.gz
[2025-06-05 18:56:35] -rw------- 1 boinc boinc 178698990 Jun  5 18:54 HITS.pool.root.1
[2025-06-05 18:56:35] -rw------- 1 boinc boinc   1013760 Jun  5 18:55 result.tar.gz
18:56:36 (682105): run_atlas exited; CPU time 28993.316083
18:56:36 (682105): called boinc_finish(0)

</stderr_txt>
]]>

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