Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:49:43 (20202): wrapper (7.7.26015): starting
23:49:43 (20202): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:49:43] Arguments: --nthreads 8
[2025-06-03 23:49:43] Threads: 8
[2025-06-03 23:49:43] Checking for CVMFS
[2025-06-03 23:49:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:49:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:49:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:49:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:49:44] 2.11.2.0 7041 28264 231228 146767 3 604 13594273 18432000 10992 130560 0 114851778 99.584 94109041 30843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:49:44] CVMFS is ok
[2025-06-03 23:49:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:49:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:49:44] Further information can be found at the LHC@home message board.
[2025-06-03 23:49:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:49:44] Checking for apptainer binary...
[2025-06-03 23:49:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:49:44] Running /usr/bin/apptainer --version
[2025-06-03 23:49:44] apptainer version 1.3.2-1.el7
[2025-06-03 23:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:49:44] c-211-33-2.aglt2.org
[2025-06-03 23:49:44] apptainer works
[2025-06-03 23:49:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:49:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:49:45] Starting ATLAS job with PandaID=6678155114
[2025-06-03 23:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:21:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:21:17]  is_altstaged=None
[2025-06-04 01:21:17]  is_tar=False
[2025-06-04 01:21:17]  lfn=log.45006595._047782.job.log.tgz.1
[2025-06-04 01:21:17]  mtime=0
[2025-06-04 01:21:17]  protocol_id=None
[2025-06-04 01:21:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:21:17]  replicas=None
[2025-06-04 01:21:17]  scope=mc23_13p6TeV
[2025-06-04 01:21:17]  status=None
[2025-06-04 01:21:17]  status_code=0
[2025-06-04 01:21:17]  storage_token=
[2025-06-04 01:21:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678155114/log.45006595._047782.job.log.tgz.1
[2025-06-04 01:21:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/49/log.45006595._047782.job.log.tgz.1
[2025-06-04 01:21:17]  workdir=None
[2025-06-04 01:21:17] ]
[2025-06-04 01:21:17] 2025-06-04 05:20:50,420 | INFO     | transferring file log.45006595._047782.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678155114/log.45006595._047782.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:21:17] 2025-06-04 05:20:50,420 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678155114/log.45006595._047782.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047782.job
[2025-06-04 01:21:17] 2025-06-04 05:20:50,438 | INFO     | adding to output.list: log.45006595._047782.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/49/log.45006595._047782.job.log.tg
[2025-06-04 01:21:17] 2025-06-04 05:20:50,439 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:21:17] 2025-06-04 05:20:50,439 | INFO     | summary of transferred files:
[2025-06-04 01:21:17] 2025-06-04 05:20:50,439 | INFO     |  -- lfn=log.45006595._047782.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:21:17] 2025-06-04 05:20:50,440 | INFO     | stage-out finished correctly
[2025-06-04 01:21:17] 2025-06-04 05:20:50,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:21:17] 2025-06-04 05:20:51,979 | WARNING  | process 32396 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:21:17] 2025-06-04 05:20:51,979 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678155114/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:21:17] 2025-06-04 05:20:52,270 | INFO     | number of running child processes to parent process 32396: 1
[2025-06-04 01:21:17] 2025-06-04 05:20:52,270 | INFO     | maximum number of monitored processes: 6
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | job 6678155114 has state=finished
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | preparing for final server update for job 6678155114 in state='finished'
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:21:17] 2025-06-04 05:20:52,769 | INFO     | job 6678155114 has finished - writing final server update
[2025-06-04 01:21:17] 2025-06-04 05:20:52,770 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:21:17] 2025-06-04 05:20:52,773 | INFO     | executing command: lscpu
[2025-06-04 01:21:17] 2025-06-04 05:20:52,821 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:21:17] 2025-06-04 05:20:54,775 | INFO     | monitor loop #405: job 0:6678155114 is in state 'finished'
[2025-06-04 01:21:17] 2025-06-04 05:20:54,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,280 | INFO     | monitor loop #406: job 0:6678155114 is in state 'finished'
[2025-06-04 01:21:17] 2025-06-04 05:20:57,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,456 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:21:17] 2025-06-04 05:20:57,457 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678155114/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,457 | INFO     | extracted standard info from prmon json
[2025-06-04 01:21:17] 2025-06-04 05:20:57,458 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:21:17] 2025-06-04 05:20:57,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:21:17] 2025-06-04 05:20:57,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:21:17] 2025-06-04 05:20:57,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:21:17] 2025-06-04 05:20:57,460 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:21:17] 2025-06-04 05:20:57,461 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 01:21:17] 2025-06-04 05:20:57,461 | INFO     | sum of deviations: -582346809.0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,461 | INFO     | mean x: 1749011794.5
[2025-06-04 01:21:17] 2025-06-04 05:20:57,461 | INFO     | mean y: 2504165.5853658537
[2025-06-04 01:21:17] 2025-06-04 05:20:57,461 | INFO     | -- intersect: 5960758678.751102
[2025-06-04 01:21:17] 2025-06-04 05:20:57,462 | INFO     | intersect: 5960758678.751102
[2025-06-04 01:21:17] 2025-06-04 05:20:57,462 | INFO     | chi2: 0.0037905267046515
[2025-06-04 01:21:17] 2025-06-04 05:20:57,462 | INFO     | -- intersect: 5960758678.751102
[2025-06-04 01:21:17] 2025-06-04 05:20:57,462 | INFO     | current memory leak: -3.41 B/s (using 82 data points, chi2=0.00)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | ..............................
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . Timing measurements:
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . get job = 0 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . initial setup = 2 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . payload setup = 5 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . stage-in = 0 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . payload execution = 5430 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . stage-out = 0 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | . log creation = 0 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,463 | INFO     | ..............................
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | 
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | job summary report
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | --------------------------------------------------
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | PanDA job id: 6678155114
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | task id: 45006595
[2025-06-04 01:21:17] 2025-06-04 05:20:57,561 | INFO     | errors: (none)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | pilot state: finished 
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | transexitcode: 0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | exeerrorcode: 0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | exeerrordiag: 
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | exitcode: 0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | exitmsg: OK
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | cpuconsumptiontime: 36492 s
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | nevents: 400
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | neventsw: 0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | pid: 32396
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | pgrp: 32396
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | corecount: 8
[2025-06-04 01:21:17] 2025-06-04 05:20:57,562 | INFO     | event service: False
[2025-06-04 01:21:17] 2025-06-04 05:20:57,563 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5440: 2431937, 5442: 2440934, 5449: 2441048}
[2025-06-04 01:21:17] 2025-06-04 05:20:57,563 | INFO     | --------------------------------------------------
[2025-06-04 01:21:17] 2025-06-04 05:20:57,563 | INFO     | 
[2025-06-04 01:21:17] 2025-06-04 05:20:57,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:21:17] 2025-06-04 05:20:57,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | job 6678155114 has completed (purged errors)
[2025-06-04 01:21:17] 2025-06-04 05:20:57,586 | INFO     | overall cleanup function is called
[2025-06-04 01:21:17] 2025-06-04 05:20:58,593 | INFO     | --- collectZombieJob: --- 10, [32396]
[2025-06-04 01:21:17] 2025-06-04 05:20:58,594 | INFO     | zombie collector waiting for pid 32396
[2025-06-04 01:21:17] 2025-06-04 05:20:58,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:21:17] 2025-06-04 05:20:58,594 | INFO     | collected zombie processes
[2025-06-04 01:21:17] 2025-06-04 05:20:58,594 | INFO     | will attempt to kill all subprocesses of pid=32396
[2025-06-04 01:21:17] 2025-06-04 05:20:58,768 | INFO     | process IDs to be killed: [32396] (in reverse order)
[2025-06-04 01:21:17] 2025-06-04 05:20:59,046 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:21:17] 2025-06-04 05:20:59,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:21:17] 2025-06-04 05:20:59,053 | INFO     | did not find any defunct processes belonging to 32396
[2025-06-04 01:21:17] 2025-06-04 05:20:59,059 | INFO     | did not find any defunct processes belonging to 32396
[2025-06-04 01:21:17] 2025-06-04 05:20:59,059 | INFO     | ready for new job
[2025-06-04 01:21:17] 2025-06-04 05:20:59,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:21:17] 2025-06-04 05:20:59,061 | INFO     | **************************************
[2025-06-04 01:21:17] 2025-06-04 05:20:59,061 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:21:17] 2025-06-04 05:20:59,061 | INFO     | **************************************
[2025-06-04 01:21:17] 2025-06-04 05:20:59,061 | INFO     | 
[2025-06-04 01:21:17] 2025-06-04 05:20:59,064 | INFO     | architecture information:
[2025-06-04 01:21:17] 2025-06-04 05:20:59,064 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:21:17] 2025-06-04 05:20:59,203 | INFO     | cat /etc/os-release:
[2025-06-04 01:21:17] NAME="CentOS Linux"
[2025-06-04 01:21:17] VERSION="7 (Core)"
[2025-06-04 01:21:17] ID="centos"
[2025-06-04 01:21:17] ID_LIKE="rhel fedora"
[2025-06-04 01:21:17] VERSION_ID="7"
[2025-06-04 01:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:21:17] ANSI_COLOR="0;31"
[2025-06-04 01:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:21:17] HOME_URL="https://www.centos.org/"
[2025-06-04 01:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:21:17] 
[2025-06-04 01:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:21:17] 
[2025-06-04 01:21:17] 2025-06-04 05:20:59,204 | INFO     | **************************************
[2025-06-04 01:21:17] 2025-06-04 05:20:59,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:21:17] 2025-06-04 05:20:59,850 | INFO     | sufficient remaining disk space (103794343936 B)
[2025-06-04 01:21:17] 2025-06-04 05:20:59,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:21:17] 2025-06-04 05:20:59,851 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:21:17] 2025-06-04 05:20:59,851 | INFO     | update_server=False
[2025-06-04 01:21:17] 2025-06-04 05:20:59,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:21:17] 2025-06-04 05:21:00,191 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:21:17] 2025-06-04 05:21:00,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:21:17] 2025-06-04 05:21:00,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:21:17] 2025-06-04 05:21:00,488 | INFO     | all job control threads have been joined
[2025-06-04 01:21:17] 2025-06-04 05:21:00,761 | INFO     | all payload control threads have been joined
[2025-06-04 01:21:17] 2025-06-04 05:21:00,788 | INFO     | all data control threads have been joined
[2025-06-04 01:21:17] 2025-06-04 05:21:00,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:21:17] 2025-06-04 05:21:00,789 | INFO     | aborting loop
[2025-06-04 01:21:17] 2025-06-04 05:21:00,857 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:21:17] 2025-06-04 05:21:01,155 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,155 | INFO     | [job] validate thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,229 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,311 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,383 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:21:17] 2025-06-04 05:21:01,494 | INFO     | [job] control thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,767 | INFO     | [payload] control thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,790 | INFO     | [data] control thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,794 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:01,894 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:02,253 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:02,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:21:17] 2025-06-04 05:21:03,047 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:03,579 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:05,409 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:10,296 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:21:17] 2025-06-04 05:21:11,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:21:17] 2025-06-04 05:21:11,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637290579776)>', '<ExcThread(monitor, started 140636992812800)>']
[2025-06-04 01:21:17] 2025-06-04 05:21:12,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:21:17] 2025-06-04 05:21:12,250 | INFO     | [monitor] control thread has ended
[2025-06-04 01:21:17] 2025-06-04 05:21:16,915 | INFO     | all workflow threads have been joined
[2025-06-04 01:21:17] 2025-06-04 05:21:16,916 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:21:17] 2025-06-04 05:21:16,916 | INFO     | traces error code: 0
[2025-06-04 01:21:17] 2025-06-04 05:21:16,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:21:17] 2025-06-04 05:21:17,050 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:21:17] 2025-06-04 05:21:17,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:21:17] 2025-06-04 05:21:17,054 [wrapper] pilotpid: 23776
[2025-06-04 01:21:17] 2025-06-04 05:21:17,056 [wrapper] Pilot exit status: 0
[2025-06-04 01:21:17] 2025-06-04 05:21:17,074 [wrapper] pandaids: 6678155114
[2025-06-04 01:21:17] 2025-06-04 05:21:17,138 [wrapper] cleanup supervisor_pilot 305091 23777
[2025-06-04 01:21:17] 2025-06-04 05:21:17,144 [wrapper] Test setup, not cleaning
[2025-06-04 01:21:17] 2025-06-04 05:21:17,146 [wrapper] apfmon messages muted
[2025-06-04 01:21:17] 2025-06-04 05:21:17,148 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:21:17] 2025-06-04 05:21:17,150 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:21:17]  *** Error codes and diagnostics ***
[2025-06-04 01:21:17]     "exeErrorCode": 0,
[2025-06-04 01:21:17]     "exeErrorDiag": "",
[2025-06-04 01:21:17]     "pilotErrorCode": 0,
[2025-06-04 01:21:17]     "pilotErrorDiag": "",
[2025-06-04 01:21:17]  *** Listing of results directory ***
[2025-06-04 01:21:17] total 395056
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 01:21:17] -rwx------ 1 boincer umatlas     37140 Jun  3 18:56 runpilot2-wrapper.sh
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:56 queuedata.json
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:21:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:49 run_atlas
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:49 job.xml
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas 215961505 Jun  3 23:49 EVNT.45006593._001918.pool.root.1
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:49 start_atlas.sh
[2025-06-04 01:21:17] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:49 shared
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 23:49 input.tar.gz
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:49 boinc_lockfile
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 23:49 pandaJob.out
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas    986077 Jun  3 23:49 agis_schedconf.cvmfs.json
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas   1603667 Jun  3 23:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:21:17] drwx------ 4 boincer umatlas      4096 Jun  3 23:49 pilot3
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas      6298 Jun  4 01:09 init_data.xml
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas 183040803 Jun  4 01:20 HITS.45006595._047782.pool.root.1
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:20 boinc_task_state.xml
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas        95 Jun  4 01:20 pilot_heartbeat.json
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas      1052 Jun  4 01:20 memory_monitor_summary.json
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas    325822 Jun  4 01:20 log.45006595._047782.job.log.tgz.1
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas      7744 Jun  4 01:20 heartbeat.json
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:21 boinc_mmap_file
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:21 wrapper_checkpoint.txt
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas      4426 Jun  4 01:21 pilotlog.txt
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas    528369 Jun  4 01:21 log.45006595._047782.job.log.1
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas       357 Jun  4 01:21 output.list
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:21 runtime_log
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas    870400 Jun  4 01:21 result.tar.gz
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 01:21 runtime_log.err
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas       660 Jun  4 01:21 AQnLDm2jpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmODaKDmbXcaSo.diag
[2025-06-04 01:21:17] -rw-r--r-- 1 boincer umatlas     21355 Jun  4 01:21 stderr.txt
[2025-06-04 01:21:17] HITS file was successfully produced:
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas 183040803 Jun  4 01:20 shared/HITS.pool.root.1
[2025-06-04 01:21:17]  *** Contents of shared directory: ***
[2025-06-04 01:21:17] total 391024
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas 215961505 Jun  3 23:49 ATLAS.root_0
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:49 start_atlas.sh
[2025-06-04 01:21:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 23:49 input.tar.gz
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas 183040803 Jun  4 01:20 HITS.pool.root.1
[2025-06-04 01:21:17] -rw------- 1 boincer umatlas    870400 Jun  4 01:21 result.tar.gz
01:21:18 (20202): run_atlas exited; CPU time 36640.028602
01:21:18 (20202): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN