Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:43 (12610): wrapper (7.7.26015): starting
23:38:43 (12610): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:38:43] Arguments: --nthreads 8
[2025-06-03 23:38:43] Threads: 8
[2025-06-03 23:38:43] Checking for CVMFS
[2025-06-03 23:38:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:38:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:38:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:38:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:38:43] 2.11.2.0 2800 35153 94332 146767 1 56 14645217 20275201 1 130560 0 11719801 99.955 7402239 8605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:38:43] CVMFS is ok
[2025-06-03 23:38:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:38:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:38:43] Further information can be found at the LHC@home message board.
[2025-06-03 23:38:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:38:43] Checking for apptainer binary...
[2025-06-03 23:38:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:38:43] Running /usr/bin/apptainer --version
[2025-06-03 23:38:43] apptainer version 1.3.2-1.el7
[2025-06-03 23:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:38:45] c-204-36.aglt2.org
[2025-06-03 23:38:45] apptainer works
[2025-06-03 23:38:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:38:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:38:45] Starting ATLAS job with PandaID=6678152454
[2025-06-03 23:38:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:29:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:29:45] 2025-06-04 05:29:25,566 | INFO     | executing command: lscpu
[2025-06-04 01:29:45] 2025-06-04 05:29:25,594 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:29:45] 2025-06-04 05:29:27,135 | INFO     | monitor loop #494: job 0:6678152454 is in state 'finished'
[2025-06-04 01:29:45] 2025-06-04 05:29:27,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:29:45] 2025-06-04 05:29:29,092 | INFO     | PID=16194 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 01:29:45] 2025-06-04 05:29:29,639 | INFO     | monitor loop #495: job 0:6678152454 is in state 'finished'
[2025-06-04 01:29:45] 2025-06-04 05:29:29,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,399 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 01:29:45] 2025-06-04 05:29:31,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152454/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,401 | INFO     | extracted standard info from prmon json
[2025-06-04 01:29:45] 2025-06-04 05:29:31,401 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:29:45] 2025-06-04 05:29:31,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:29:45] 2025-06-04 05:29:31,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:29:45] 2025-06-04 05:29:31,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:29:45] 2025-06-04 05:29:31,406 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:29:45] 2025-06-04 05:29:31,406 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,407 | INFO     | sum of deviations: -1549855304.0000007
[2025-06-04 01:29:45] 2025-06-04 05:29:31,407 | INFO     | mean x: 1749011636.5
[2025-06-04 01:29:45] 2025-06-04 05:29:31,407 | INFO     | mean y: 2532292.4814814813
[2025-06-04 01:29:45] 2025-06-04 05:29:31,407 | INFO     | -- intersect: 6942722892.580288
[2025-06-04 01:29:45] 2025-06-04 05:29:31,407 | INFO     | intersect: 6942722892.580288
[2025-06-04 01:29:45] 2025-06-04 05:29:31,408 | INFO     | chi2: 1.6284833949292359
[2025-06-04 01:29:45] 2025-06-04 05:29:31,408 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,408 | INFO     | sum of deviations: -1000870310.000002
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | mean x: 1749011484.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | mean y: 2533911.708737864
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | -- intersect: 5169329829.469603
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | intersect: 5169329829.469603
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | chi2: 1.6304936193211865
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | current chi2=1.6304936193211865 (change=-0.12344150380716627 %)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,409 | INFO     | right removable region: 102
[2025-06-04 01:29:45] 2025-06-04 05:29:31,410 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,410 | INFO     | sum of deviations: -17996903200.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,410 | INFO     | mean x: 1749011789.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,410 | INFO     | mean y: 2579712.368932039
[2025-06-04 01:29:45] 2025-06-04 05:29:31,411 | INFO     | -- intersect: 92908065340.6168
[2025-06-04 01:29:45] 2025-06-04 05:29:31,411 | INFO     | intersect: 92908065340.6168
[2025-06-04 01:29:45] 2025-06-04 05:29:31,411 | INFO     | chi2: 0.09834132959486669
[2025-06-04 01:29:45] 2025-06-04 05:29:31,411 | INFO     | current chi2=0.09834132959486669 (change=93.96117087216969 %)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,411 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 01:29:45] 2025-06-04 05:29:31,412 | INFO     | sum of deviations: -16118842154.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,412 | INFO     | mean x: 1749011941.5
[2025-06-04 01:29:45] 2025-06-04 05:29:31,412 | INFO     | mean y: 2573555.3469387754
[2025-06-04 01:29:45] 2025-06-04 05:29:31,412 | INFO     | -- intersect: 96611040077.2433
[2025-06-04 01:29:45] 2025-06-04 05:29:31,412 | INFO     | intersect: 96611040077.2433
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | chi2: 0.09563046862480712
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | current chi2=0.09563046862480712 (change=2.7565836065339044 %)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | left removable region: 20
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | sum of deviations: -9427904166.0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,413 | INFO     | mean x: 1749012063.5
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | mean y: 2555131.4146341463
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | -- intersect: 96463736541.2124
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | intersect: 96463736541.2124
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | chi2: 0.08463840972465325
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | -- intersect: 96463736541.2124
[2025-06-04 01:29:45] 2025-06-04 05:29:31,414 | INFO     | current memory leak: -55.15 B/s (using 82 data points, chi2=0.08)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | ..............................
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . Timing measurements:
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . get job = 0 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . initial setup = 2 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . payload setup = 10 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . stage-in = 0 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,415 | INFO     | . payload execution = 6589 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,416 | INFO     | . stage-out = 0 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,416 | INFO     | . log creation = 0 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,416 | INFO     | ..............................
[2025-06-04 01:29:45] 2025-06-04 05:29:31,509 | INFO     | 
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | job summary report
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | --------------------------------------------------
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | PanDA job id: 6678152454
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | task id: 45006595
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | errors: (none)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | pilot state: finished 
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | transexitcode: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | exeerrorcode: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | exeerrordiag: 
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | exitcode: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,511 | INFO     | exitmsg: OK
[2025-06-04 01:29:45] 2025-06-04 05:29:31,512 | INFO     | cpuconsumptiontime: 49435 s
[2025-06-04 01:29:45] 2025-06-04 05:29:31,512 | INFO     | nevents: 400
[2025-06-04 01:29:45] 2025-06-04 05:29:31,512 | INFO     | neventsw: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,512 | INFO     | pid: 22855
[2025-06-04 01:29:45] 2025-06-04 05:29:31,512 | INFO     | pgrp: 22855
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | corecount: 8
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | event service: False
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | sizes: {0: 2404957, 1: 2405212, 6: 2405418, 12: 2405446, 6604: 2432343, 6605: 2441284, 6607: 2441468, 6615: 2441638}
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | --------------------------------------------------
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | 
[2025-06-04 01:29:45] 2025-06-04 05:29:31,513 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:29:45] 2025-06-04 05:29:31,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:29:45] 2025-06-04 05:29:31,546 | INFO     | job 6678152454 has completed (purged errors)
[2025-06-04 01:29:45] 2025-06-04 05:29:31,546 | INFO     | overall cleanup function is called
[2025-06-04 01:29:45] 2025-06-04 05:29:32,553 | INFO     | --- collectZombieJob: --- 10, [22855]
[2025-06-04 01:29:45] 2025-06-04 05:29:32,553 | INFO     | zombie collector waiting for pid 22855
[2025-06-04 01:29:45] 2025-06-04 05:29:32,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:29:45] 2025-06-04 05:29:32,554 | INFO     | collected zombie processes
[2025-06-04 01:29:45] 2025-06-04 05:29:32,554 | INFO     | will attempt to kill all subprocesses of pid=22855
[2025-06-04 01:29:45] 2025-06-04 05:29:32,644 | INFO     | process IDs to be killed: [22855] (in reverse order)
[2025-06-04 01:29:45] 2025-06-04 05:29:32,700 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:29:45] 2025-06-04 05:29:32,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:29:45] 2025-06-04 05:29:32,705 | INFO     | did not find any defunct processes belonging to 22855
[2025-06-04 01:29:45] 2025-06-04 05:29:32,709 | INFO     | did not find any defunct processes belonging to 22855
[2025-06-04 01:29:45] 2025-06-04 05:29:32,709 | INFO     | ready for new job
[2025-06-04 01:29:45] 2025-06-04 05:29:32,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:29:45] 2025-06-04 05:29:32,711 | INFO     | **************************************
[2025-06-04 01:29:45] 2025-06-04 05:29:32,711 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:29:45] 2025-06-04 05:29:32,711 | INFO     | **************************************
[2025-06-04 01:29:45] 2025-06-04 05:29:32,712 | INFO     | 
[2025-06-04 01:29:45] 2025-06-04 05:29:32,712 | INFO     | architecture information:
[2025-06-04 01:29:45] 2025-06-04 05:29:32,713 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:29:45] 2025-06-04 05:29:32,732 | INFO     | cat /etc/os-release:
[2025-06-04 01:29:45] NAME="CentOS Linux"
[2025-06-04 01:29:45] VERSION="7 (Core)"
[2025-06-04 01:29:45] ID="centos"
[2025-06-04 01:29:45] ID_LIKE="rhel fedora"
[2025-06-04 01:29:45] VERSION_ID="7"
[2025-06-04 01:29:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:29:45] ANSI_COLOR="0;31"
[2025-06-04 01:29:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:29:45] HOME_URL="https://www.centos.org/"
[2025-06-04 01:29:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:29:45] 
[2025-06-04 01:29:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:29:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:29:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:29:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:29:45] 
[2025-06-04 01:29:45] 2025-06-04 05:29:32,733 | INFO     | **************************************
[2025-06-04 01:29:45] 2025-06-04 05:29:33,234 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:29:45] 2025-06-04 05:29:33,253 | INFO     | sufficient remaining disk space (18622709760 B)
[2025-06-04 01:29:45] 2025-06-04 05:29:33,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:29:45] 2025-06-04 05:29:33,253 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:29:45] 2025-06-04 05:29:33,254 | INFO     | update_server=False
[2025-06-04 01:29:45] 2025-06-04 05:29:33,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:29:45] 2025-06-04 05:29:33,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:29:45] 2025-06-04 05:29:33,255 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:29:45] 2025-06-04 05:29:33,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:29:45] 2025-06-04 05:29:33,255 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:29:45] 2025-06-04 05:29:33,256 | INFO     | aborting loop
[2025-06-04 01:29:45] 2025-06-04 05:29:33,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:29:45] 2025-06-04 05:29:33,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:29:45] 2025-06-04 05:29:33,493 | INFO     | all data control threads have been joined
[2025-06-04 01:29:45] 2025-06-04 05:29:33,678 | INFO     | all job control threads have been joined
[2025-06-04 01:29:45] 2025-06-04 05:29:33,772 | INFO     | all payload control threads have been joined
[2025-06-04 01:29:45] 2025-06-04 05:29:34,259 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,260 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,261 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,261 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,498 | INFO     | [data] control thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,596 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,684 | INFO     | [job] control thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:29:45] 2025-06-04 05:29:34,777 | INFO     | [payload] control thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:34,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:29:45] 2025-06-04 05:29:34,855 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:35,236 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:35,617 | INFO     | [job] validate thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:35,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:35,746 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:35,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:36,753 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:38,837 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:29:45] 2025-06-04 05:29:40,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125832759104)>', '<ExcThread(monitor, started 140125119969024)>']
[2025-06-04 01:29:45] 2025-06-04 05:29:41,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:29:45] 2025-06-04 05:29:41,319 | INFO     | [monitor] control thread has ended
[2025-06-04 01:29:45] 2025-06-04 05:29:45,466 | INFO     | all workflow threads have been joined
[2025-06-04 01:29:45] 2025-06-04 05:29:45,466 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:29:45] 2025-06-04 05:29:45,467 | INFO     | traces error code: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:45,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:29:45] 2025-06-04 05:29:45,590 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:29:45] 2025-06-04 05:29:45,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:29:45] 2025-06-04 05:29:45,599 [wrapper] pilotpid: 16194
[2025-06-04 01:29:45] 2025-06-04 05:29:45,603 [wrapper] Pilot exit status: 0
[2025-06-04 01:29:45] 2025-06-04 05:29:45,621 [wrapper] pandaids: 6678152454
[2025-06-04 01:29:45] 2025-06-04 05:29:45,662 [wrapper] cleanup supervisor_pilot 24222 16195
[2025-06-04 01:29:45] 2025-06-04 05:29:45,666 [wrapper] Test setup, not cleaning
[2025-06-04 01:29:45] 2025-06-04 05:29:45,671 [wrapper] apfmon messages muted
[2025-06-04 01:29:45] 2025-06-04 05:29:45,675 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:29:45] 2025-06-04 05:29:45,679 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:29:45]  *** Error codes and diagnostics ***
[2025-06-04 01:29:45]     "exeErrorCode": 0,
[2025-06-04 01:29:45]     "exeErrorDiag": "",
[2025-06-04 01:29:45]     "pilotErrorCode": 0,
[2025-06-04 01:29:45]     "pilotErrorDiag": "",
[2025-06-04 01:29:45]  *** Listing of results directory ***
[2025-06-04 01:29:45] total 384308
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:36 queuedata.json
[2025-06-04 01:29:45] -rwx------ 1 boincer umatlas     37140 Jun  3 18:37 runpilot2-wrapper.sh
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:29:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:38 run_atlas
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:38 job.xml
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas 213501630 Jun  3 23:38 EVNT.45006593._001893.pool.root.1
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:38 start_atlas.sh
[2025-06-04 01:29:45] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:38 shared
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 23:38 input.tar.gz
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:38 boinc_lockfile
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 23:38 pandaJob.out
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas    986077 Jun  3 23:38 agis_schedconf.cvmfs.json
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas   1603667 Jun  3 23:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:29:45] drwx------ 4 boincer umatlas      4096 Jun  3 23:39 pilot3
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas      5904 Jun  4 01:27 init_data.xml
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas 174302472 Jun  4 01:28 HITS.45006595._047231.pool.root.1
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:29 boinc_task_state.xml
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas      1062 Jun  4 01:29 memory_monitor_summary.json
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas    335151 Jun  4 01:29 log.45006595._047231.job.log.tgz.1
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas      7751 Jun  4 01:29 heartbeat.json
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas        95 Jun  4 01:29 pilot_heartbeat.json
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:29 boinc_mmap_file
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas      4476 Jun  4 01:29 pilotlog.txt
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:29 wrapper_checkpoint.txt
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas    612499 Jun  4 01:29 log.45006595._047231.job.log.1
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas       357 Jun  4 01:29 output.list
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:29 runtime_log
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas    962560 Jun  4 01:29 result.tar.gz
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 01:29 runtime_log.err
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas       659 Jun  4 01:29 pe1KDm0Qpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvOmKDmRZS6Jn.diag
[2025-06-04 01:29:45] -rw-r--r-- 1 boincer umatlas     21211 Jun  4 01:29 stderr.txt
[2025-06-04 01:29:45] HITS file was successfully produced:
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas 174302472 Jun  4 01:28 shared/HITS.pool.root.1
[2025-06-04 01:29:45]  *** Contents of shared directory: ***
[2025-06-04 01:29:45] total 380184
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas 213501630 Jun  3 23:38 ATLAS.root_0
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:38 start_atlas.sh
[2025-06-04 01:29:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 23:38 input.tar.gz
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas 174302472 Jun  4 01:28 HITS.pool.root.1
[2025-06-04 01:29:45] -rw------- 1 boincer umatlas    962560 Jun  4 01:29 result.tar.gz
01:29:47 (12610): run_atlas exited; CPU time 49379.690680
01:29:47 (12610): called boinc_finish(0)

</stderr_txt>
]]>

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