Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:37:23 (293491): wrapper (7.7.26015): starting
23:37:23 (293491): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:37:23] Arguments: --nthreads 8
[2025-06-03 23:37:23] Threads: 8
[2025-06-03 23:37:23] Checking for CVMFS
[2025-06-03 23:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:37:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:37:23] 2.11.2.0 7041 28252 218564 146767 3 240 11598299 18432000 10006 130560 0 114684768 99.586 93370887 30724 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:37:23] CVMFS is ok
[2025-06-03 23:37:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:37:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:37:23] Further information can be found at the LHC@home message board.
[2025-06-03 23:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:37:23] Checking for apptainer binary...
[2025-06-03 23:37:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:37:23] Running /usr/bin/apptainer --version
[2025-06-03 23:37:23] apptainer version 1.3.2-1.el7
[2025-06-03 23:37:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:37:24] c-211-33-2.aglt2.org
[2025-06-03 23:37:24] apptainer works
[2025-06-03 23:37:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:37:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:37:24] Starting ATLAS job with PandaID=6678153469
[2025-06-03 23:37:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:03:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:03:20]  protocol_id=None
[2025-06-04 01:03:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:03:20]  replicas=None
[2025-06-04 01:03:20]  scope=mc23_13p6TeV
[2025-06-04 01:03:20]  status=None
[2025-06-04 01:03:20]  status_code=0
[2025-06-04 01:03:20]  storage_token=
[2025-06-04 01:03:20]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678153469/log.45006595._047487.job.log.tgz.1
[2025-06-04 01:03:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/a2/log.45006595._047487.job.log.tgz.1
[2025-06-04 01:03:20]  workdir=None
[2025-06-04 01:03:20] ]
[2025-06-04 01:03:20] 2025-06-04 05:02:58,032 | INFO     | transferring file log.45006595._047487.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678153469/log.45006595._047487.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:03:20] 2025-06-04 05:02:58,032 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678153469/log.45006595._047487.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._047487.job
[2025-06-04 01:03:20] 2025-06-04 05:02:58,075 | INFO     | adding to output.list: log.45006595._047487.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/a2/log.45006595._047487.job.log.tg
[2025-06-04 01:03:20] 2025-06-04 05:02:58,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:03:20] 2025-06-04 05:02:58,076 | INFO     | summary of transferred files:
[2025-06-04 01:03:20] 2025-06-04 05:02:58,076 | INFO     |  -- lfn=log.45006595._047487.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:03:20] 2025-06-04 05:02:58,076 | INFO     | stage-out finished correctly
[2025-06-04 01:03:20] 2025-06-04 05:02:59,107 | WARNING  | process 303551 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 01:03:20] 2025-06-04 05:02:59,107 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678153469/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:03:20] 2025-06-04 05:02:59,344 | INFO     | number of running child processes to parent process 303551: 1
[2025-06-04 01:03:20] 2025-06-04 05:02:59,344 | INFO     | maximum number of monitored processes: 6
[2025-06-04 01:03:20] 2025-06-04 05:02:59,887 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:03:20] 2025-06-04 05:03:01,848 | INFO     | monitor loop #381: job 0:6678153469 is in state 'finished'
[2025-06-04 01:03:20] 2025-06-04 05:03:01,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:03:20] 2025-06-04 05:03:02,492 | INFO     | job 6678153469 has state=finished
[2025-06-04 01:03:20] 2025-06-04 05:03:02,492 | INFO     | preparing for final server update for job 6678153469 in state='finished'
[2025-06-04 01:03:20] 2025-06-04 05:03:02,492 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:03:20] 2025-06-04 05:03:02,492 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:03:20] 2025-06-04 05:03:02,493 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:03:20] 2025-06-04 05:03:02,493 | INFO     | job 6678153469 has finished - writing final server update
[2025-06-04 01:03:20] 2025-06-04 05:03:02,493 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:03:20] 2025-06-04 05:03:02,497 | INFO     | executing command: lscpu
[2025-06-04 01:03:20] 2025-06-04 05:03:02,543 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:03:20] 2025-06-04 05:03:02,650 | INFO     | PID=297086 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 01:03:20] 2025-06-04 05:03:02,650 | INFO     | .. there are 18 such processes running
[2025-06-04 01:03:20] 2025-06-04 05:03:04,353 | INFO     | monitor loop #382: job 0:6678153469 is in state 'finished'
[2025-06-04 01:03:20] 2025-06-04 05:03:04,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:03:20] 2025-06-04 05:03:06,858 | INFO     | monitor loop #383: job 0:6678153469 is in state 'finished'
[2025-06-04 01:03:20] 2025-06-04 05:03:06,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,603 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:03:20] 2025-06-04 05:03:07,603 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678153469/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,604 | INFO     | extracted standard info from prmon json
[2025-06-04 01:03:20] 2025-06-04 05:03:07,604 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:03:20] 2025-06-04 05:03:07,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:03:20] 2025-06-04 05:03:07,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:03:20] 2025-06-04 05:03:07,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | sum of deviations: -1967303253.0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | mean x: 1749010900.0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | mean y: 2504193.0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | -- intersect: 24312589453.51847
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | intersect: 24312589453.51847
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | chi2: 0.003126764946195201
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | -- intersect: 24312589453.51847
[2025-06-04 01:03:20] 2025-06-04 05:03:07,606 | INFO     | current memory leak: -13.90 B/s (using 77 data points, chi2=0.00)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | ..............................
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . Timing measurements:
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . get job = 0 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . initial setup = 2 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . payload setup = 5 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . stage-in = 0 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . payload execution = 5101 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . stage-out = 0 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | . log creation = 0 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,607 | INFO     | ..............................
[2025-06-04 01:03:20] 2025-06-04 05:03:07,663 | INFO     | 5137s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 01:03:20] 2025-06-04 05:03:07,665 | INFO     | 
[2025-06-04 01:03:20] 2025-06-04 05:03:07,665 | INFO     | job summary report
[2025-06-04 01:03:20] 2025-06-04 05:03:07,665 | INFO     | --------------------------------------------------
[2025-06-04 01:03:20] 2025-06-04 05:03:07,665 | INFO     | PanDA job id: 6678153469
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | task id: 45006595
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | errors: (none)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | pilot state: finished 
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | transexitcode: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | exeerrorcode: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | exeerrordiag: 
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | exitcode: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | exitmsg: OK
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | cpuconsumptiontime: 34675 s
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | nevents: 400
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | neventsw: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | pid: 303551
[2025-06-04 01:03:20] 2025-06-04 05:03:07,666 | INFO     | pgrp: 303551
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | corecount: 8
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | event service: False
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 5110: 2431729, 5111: 2440670, 5113: 2440726, 5121: 2441024}
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | --------------------------------------------------
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | 
[2025-06-04 01:03:20] 2025-06-04 05:03:07,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 01:03:20] 2025-06-04 05:03:07,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | job 6678153469 has completed (purged errors)
[2025-06-04 01:03:20] 2025-06-04 05:03:07,693 | INFO     | overall cleanup function is called
[2025-06-04 01:03:20] 2025-06-04 05:03:08,701 | INFO     | --- collectZombieJob: --- 10, [303551]
[2025-06-04 01:03:20] 2025-06-04 05:03:08,702 | INFO     | zombie collector waiting for pid 303551
[2025-06-04 01:03:20] 2025-06-04 05:03:08,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:03:20] 2025-06-04 05:03:08,702 | INFO     | collected zombie processes
[2025-06-04 01:03:20] 2025-06-04 05:03:08,702 | INFO     | will attempt to kill all subprocesses of pid=303551
[2025-06-04 01:03:20] 2025-06-04 05:03:08,989 | INFO     | process IDs to be killed: [303551] (in reverse order)
[2025-06-04 01:03:20] 2025-06-04 05:03:09,108 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:03:20] 2025-06-04 05:03:09,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:03:20] 2025-06-04 05:03:09,115 | INFO     | did not find any defunct processes belonging to 303551
[2025-06-04 01:03:20] 2025-06-04 05:03:09,121 | INFO     | did not find any defunct processes belonging to 303551
[2025-06-04 01:03:20] 2025-06-04 05:03:09,121 | INFO     | ready for new job
[2025-06-04 01:03:20] 2025-06-04 05:03:09,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:03:20] 2025-06-04 05:03:09,122 | INFO     | **************************************
[2025-06-04 01:03:20] 2025-06-04 05:03:09,122 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:03:20] 2025-06-04 05:03:09,122 | INFO     | **************************************
[2025-06-04 01:03:20] 2025-06-04 05:03:09,123 | INFO     | 
[2025-06-04 01:03:20] 2025-06-04 05:03:09,125 | INFO     | architecture information:
[2025-06-04 01:03:20] 2025-06-04 05:03:09,126 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:03:20] 2025-06-04 05:03:09,153 | INFO     | cat /etc/os-release:
[2025-06-04 01:03:20] NAME="CentOS Linux"
[2025-06-04 01:03:20] VERSION="7 (Core)"
[2025-06-04 01:03:20] ID="centos"
[2025-06-04 01:03:20] ID_LIKE="rhel fedora"
[2025-06-04 01:03:20] VERSION_ID="7"
[2025-06-04 01:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:03:20] ANSI_COLOR="0;31"
[2025-06-04 01:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:03:20] HOME_URL="https://www.centos.org/"
[2025-06-04 01:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:03:20] 
[2025-06-04 01:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:03:20] 
[2025-06-04 01:03:20] 2025-06-04 05:03:09,154 | INFO     | **************************************
[2025-06-04 01:03:20] 2025-06-04 05:03:09,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 01:03:20] 2025-06-04 05:03:09,679 | INFO     | sufficient remaining disk space (104036564992 B)
[2025-06-04 01:03:20] 2025-06-04 05:03:09,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:03:20] 2025-06-04 05:03:09,679 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:03:20] 2025-06-04 05:03:09,679 | INFO     | update_server=False
[2025-06-04 01:03:20] 2025-06-04 05:03:09,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:03:20] 2025-06-04 05:03:09,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:03:20] 2025-06-04 05:03:09,766 | INFO     | all payload control threads have been joined
[2025-06-04 01:03:20] 2025-06-04 05:03:10,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:03:20] 2025-06-04 05:03:10,389 | INFO     | aborting loop
[2025-06-04 01:03:20] 2025-06-04 05:03:10,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:03:20] 2025-06-04 05:03:10,670 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:03:20] 2025-06-04 05:03:10,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:03:20] 2025-06-04 05:03:10,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:03:20] 2025-06-04 05:03:10,676 | INFO     | all data control threads have been joined
[2025-06-04 01:03:20] 2025-06-04 05:03:10,685 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:10,772 | INFO     | [payload] control thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:10,860 | INFO     | all job control threads have been joined
[2025-06-04 01:03:20] 2025-06-04 05:03:10,996 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,275 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,394 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,567 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,591 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,593 | INFO     | [job] validate thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,681 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,681 | INFO     | [data] control thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,841 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,865 | INFO     | [job] control thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:11,936 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:12,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:12,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:03:20] 2025-06-04 05:03:13,687 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:14,451 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:03:20] 2025-06-04 05:03:15,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027441391424)>', '<ExcThread(monitor, started 140026872592128)>']
[2025-06-04 01:03:20] 2025-06-04 05:03:15,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:03:20] 2025-06-04 05:03:15,688 | INFO     | [monitor] control thread has ended
[2025-06-04 01:03:20] 2025-06-04 05:03:20,187 | INFO     | all workflow threads have been joined
[2025-06-04 01:03:20] 2025-06-04 05:03:20,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:03:20] 2025-06-04 05:03:20,188 | INFO     | traces error code: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:20,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:03:20] 2025-06-04 05:03:20,299 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:03:20] 2025-06-04 05:03:20,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:03:20] 2025-06-04 05:03:20,305 [wrapper] pilotpid: 297086
[2025-06-04 01:03:20] 2025-06-04 05:03:20,307 [wrapper] Pilot exit status: 0
[2025-06-04 01:03:20] 2025-06-04 05:03:20,318 [wrapper] pandaids: 6678153469
[2025-06-04 01:03:20] 2025-06-04 05:03:20,368 [wrapper] cleanup supervisor_pilot 212209 297087
[2025-06-04 01:03:20] 2025-06-04 05:03:20,370 [wrapper] Test setup, not cleaning
[2025-06-04 01:03:20] 2025-06-04 05:03:20,373 [wrapper] apfmon messages muted
[2025-06-04 01:03:20] 2025-06-04 05:03:20,375 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:03:20] 2025-06-04 05:03:20,377 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:03:20]  *** Error codes and diagnostics ***
[2025-06-04 01:03:20]     "exeErrorCode": 0,
[2025-06-04 01:03:20]     "exeErrorDiag": "",
[2025-06-04 01:03:20]     "pilotErrorCode": 0,
[2025-06-04 01:03:20]     "pilotErrorDiag": "",
[2025-06-04 01:03:20]  *** Listing of results directory ***
[2025-06-04 01:03:20] total 392196
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:45 queuedata.json
[2025-06-04 01:03:20] -rwx------ 1 boincer umatlas     37140 Jun  3 18:45 runpilot2-wrapper.sh
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:03:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:37 run_atlas
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:37 job.xml
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas 216087451 Jun  3 23:37 EVNT.45006593._001906.pool.root.1
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:37 start_atlas.sh
[2025-06-04 01:03:20] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:37 shared
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 23:37 input.tar.gz
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:37 boinc_lockfile
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 23:37 pandaJob.out
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas    986077 Jun  3 23:37 agis_schedconf.cvmfs.json
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas   1603667 Jun  3 23:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:03:20] drwx------ 4 boincer umatlas      4096 Jun  3 23:37 pilot3
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas      6298 Jun  4 01:01 init_data.xml
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:02 boinc_task_state.xml
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas 180094124 Jun  4 01:02 HITS.45006595._047487.pool.root.1
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas      1052 Jun  4 01:02 memory_monitor_summary.json
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas    298860 Jun  4 01:02 log.45006595._047487.job.log.tgz.1
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas        95 Jun  4 01:03 pilot_heartbeat.json
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:03 boinc_mmap_file
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas      7741 Jun  4 01:03 heartbeat.json
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:03 wrapper_checkpoint.txt
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas      4354 Jun  4 01:03 pilotlog.txt
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas    499571 Jun  4 01:03 log.45006595._047487.job.log.1
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas       357 Jun  4 01:03 output.list
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:03 runtime_log
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas    819200 Jun  4 01:03 result.tar.gz
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas       657 Jun  4 01:03 ZpRMDmNZpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1QmKDm5ij6zn.diag
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 01:03 runtime_log.err
[2025-06-04 01:03:20] -rw-r--r-- 1 boincer umatlas     21830 Jun  4 01:03 stderr.txt
[2025-06-04 01:03:20] HITS file was successfully produced:
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas 180094124 Jun  4 01:02 shared/HITS.pool.root.1
[2025-06-04 01:03:20]  *** Contents of shared directory: ***
[2025-06-04 01:03:20] total 388220
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas 216087451 Jun  3 23:37 ATLAS.root_0
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:37 start_atlas.sh
[2025-06-04 01:03:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 23:37 input.tar.gz
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas 180094124 Jun  4 01:02 HITS.pool.root.1
[2025-06-04 01:03:20] -rw------- 1 boincer umatlas    819200 Jun  4 01:03 result.tar.gz
01:03:21 (293491): run_atlas exited; CPU time 34805.561729
01:03:21 (293491): called boinc_finish(0)

</stderr_txt>
]]>

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