Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:04:38 (2385471): wrapper (7.7.26015): starting
15:04:38 (2385471): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 15:04:38] Arguments: --nthreads 2
[2025-06-04 15:04:38] Threads: 2
[2025-06-04 15:04:38] Checking for CVMFS
[2025-06-04 15:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:04:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:04:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:04:38] 2.9.2.0 1765466 2650 63432 146780 1 56 32249747 36864000 0 130560 0 1634231 99.990 604759 44043 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 15:04:38] CVMFS is ok
[2025-06-04 15:04:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:04:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:04:38] Further information can be found at the LHC@home message board.
[2025-06-04 15:04:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:04:38] Checking for apptainer binary...
[2025-06-04 15:04:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:04:38] Running /usr/bin/apptainer --version
[2025-06-04 15:04:38] apptainer version 1.3.6-6.1
[2025-06-04 15:04:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:04:39] cosA127a
[2025-06-04 15:04:39] apptainer works
[2025-06-04 15:04:39] Set ATHENA_PROC_NUMBER=2
[2025-06-04 15:04:39] Set ATHENA_CORE_NUMBER=2
[2025-06-04 15:04:39] Starting ATLAS job with PandaID=6678245549
[2025-06-04 15:04:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:08:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:08:32] 2025-06-04 15:08:09,363 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:08:32] 2025-06-04 15:08:09,363 | INFO     | job 6678245549 has finished - writing final server update
[2025-06-04 17:08:32] 2025-06-04 15:08:09,363 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:08:32] 2025-06-04 15:08:09,364 | INFO     | executing command: lscpu
[2025-06-04 17:08:32] 2025-06-04 15:08:09,376 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:08:32] 2025-06-04 15:08:11,035 | INFO     | monitor loop #570: job 0:6678245549 is in state 'finished'
[2025-06-04 17:08:32] 2025-06-04 15:08:11,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,832 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:08:32] 2025-06-04 15:08:11,832 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678245549/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,832 | INFO     | extracted standard info from prmon json
[2025-06-04 17:08:32] 2025-06-04 15:08:11,832 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:08:32] 2025-06-04 15:08:11,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:08:32] 2025-06-04 15:08:11,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:08:32] 2025-06-04 15:08:11,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | sum of square deviations: 549294020.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | sum of deviations: 645445635.9999979
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | mean x: 1749045965.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | mean y: 2314364.380165289
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | -- intersect: -2052894766.1919372
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | intersect: -2052894766.1919372
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | chi2: 1.5544246379245399
[2025-06-04 17:08:32] 2025-06-04 15:08:11,834 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | sum of deviations: 901569233.499999
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | mean x: 1749045812.5
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | mean y: 2314962.6810344825
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | -- intersect: -3255903141.654448
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | intersect: -3255903141.654448
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | chi2: 1.5561185951613208
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | current chi2=1.5561185951613208 (change=-0.1089764788496057 %)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | right removable region: 115
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | sum of deviations: -13698324333.999998
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | mean x: 1749046117.5
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | mean y: 2346989.4310344825
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | -- intersect: 49507292886.7271
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | intersect: 49507292886.7271
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | chi2: 0.12675459722901264
[2025-06-04 17:08:32] 2025-06-04 15:08:11,835 | INFO     | current chi2=0.12675459722901264 (change=91.84556175085756 %)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | sum of deviations: -9656274013.999998
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | mean x: 1749046270.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | mean y: 2336687.8198198196
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | -- intersect: 39831278601.18731
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | intersect: 39831278601.18731
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | chi2: 0.10997401242267048
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | current chi2=0.10997401242267048 (change=13.238639996641702 %)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | left removable region: 20
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | sum of deviations: -699080069.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | mean x: 1749046392.0
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | mean y: 2311701.831578947
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | -- intersect: 4601986561.069864
[2025-06-04 17:08:32] 2025-06-04 15:08:11,836 | INFO     | intersect: 4601986561.069864
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | chi2: 0.020332341205570682
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | -- intersect: 4601986561.069864
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | current memory leak: -2.63 B/s (using 95 data points, chi2=0.02)
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | ..............................
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . Timing measurements:
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . get job = 0 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . initial setup = 1 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . payload setup = 3 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . stage-in = 0 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . payload execution = 7380 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . stage-out = 0 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | . log creation = 0 s
[2025-06-04 17:08:32] 2025-06-04 15:08:11,837 | INFO     | ..............................
[2025-06-04 17:08:32] 2025-06-04 15:08:12,273 | INFO     | 
[2025-06-04 17:08:32] 2025-06-04 15:08:12,274 | INFO     | job summary report
[2025-06-04 17:08:32] 2025-06-04 15:08:12,274 | INFO     | --------------------------------------------------
[2025-06-04 17:08:32] 2025-06-04 15:08:12,274 | INFO     | PanDA job id: 6678245549
[2025-06-04 17:08:32] 2025-06-04 15:08:12,274 | INFO     | task id: 45006595
[2025-06-04 17:08:32] 2025-06-04 15:08:12,274 | INFO     | errors: (none)
[2025-06-04 17:08:32] 2025-06-04 15:08:12,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:08:32] 2025-06-04 15:08:12,275 | INFO     | pilot state: finished 
[2025-06-04 17:08:32] 2025-06-04 15:08:12,275 | INFO     | transexitcode: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | exeerrorcode: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | exeerrordiag: 
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | exitcode: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | exitmsg: OK
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | cpuconsumptiontime: 14389 s
[2025-06-04 17:08:32] 2025-06-04 15:08:12,276 | INFO     | nevents: 400
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | neventsw: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | pid: 2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | pgrp: 2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | corecount: 2
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | event service: False
[2025-06-04 17:08:32] 2025-06-04 15:08:12,277 | INFO     | sizes: {0: 2397343, 2: 2397549, 10: 2397577, 7387: 2425050, 7388: 2434052, 7391: 2434052, 7393: 2434350}
[2025-06-04 17:08:32] 2025-06-04 15:08:12,278 | INFO     | --------------------------------------------------
[2025-06-04 17:08:32] 2025-06-04 15:08:12,278 | INFO     | 
[2025-06-04 17:08:32] 2025-06-04 15:08:12,278 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:08:32] 2025-06-04 15:08:12,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | job 6678245549 has completed (purged errors)
[2025-06-04 17:08:32] 2025-06-04 15:08:12,291 | INFO     | overall cleanup function is called
[2025-06-04 17:08:32] 2025-06-04 15:08:13,298 | INFO     | --- collectZombieJob: --- 10, [2395551]
[2025-06-04 17:08:32] 2025-06-04 15:08:13,298 | INFO     | zombie collector waiting for pid 2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:13,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:08:32] 2025-06-04 15:08:13,298 | INFO     | collected zombie processes
[2025-06-04 17:08:32] 2025-06-04 15:08:13,299 | INFO     | will attempt to kill all subprocesses of pid=2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:13,337 | INFO     | process IDs to be killed: [2395551] (in reverse order)
[2025-06-04 17:08:32] 2025-06-04 15:08:13,360 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:08:32] 2025-06-04 15:08:13,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:08:32] 2025-06-04 15:08:13,361 | INFO     | did not find any defunct processes belonging to 2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:13,362 | INFO     | did not find any defunct processes belonging to 2395551
[2025-06-04 17:08:32] 2025-06-04 15:08:13,362 | INFO     | ready for new job
[2025-06-04 17:08:32] 2025-06-04 15:08:13,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | **************************************
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | **************************************
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | 
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | architecture information:
[2025-06-04 17:08:32] 2025-06-04 15:08:13,363 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:08:32] 2025-06-04 15:08:13,373 | INFO     | cat /etc/os-release:
[2025-06-04 17:08:32] NAME="CentOS Linux"
[2025-06-04 17:08:32] VERSION="7 (Core)"
[2025-06-04 17:08:32] ID="centos"
[2025-06-04 17:08:32] ID_LIKE="rhel fedora"
[2025-06-04 17:08:32] VERSION_ID="7"
[2025-06-04 17:08:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:08:32] ANSI_COLOR="0;31"
[2025-06-04 17:08:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:08:32] HOME_URL="https://www.centos.org/"
[2025-06-04 17:08:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:08:32] 
[2025-06-04 17:08:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:08:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:08:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:08:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:08:32] 
[2025-06-04 17:08:32] 2025-06-04 15:08:13,373 | INFO     | **************************************
[2025-06-04 17:08:32] 2025-06-04 15:08:13,877 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:08:32] 2025-06-04 15:08:13,890 | INFO     | sufficient remaining disk space (323830677504 B)
[2025-06-04 17:08:32] 2025-06-04 15:08:13,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:08:32] 2025-06-04 15:08:13,891 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:08:32] 2025-06-04 15:08:13,891 | INFO     | update_server=False
[2025-06-04 17:08:32] 2025-06-04 15:08:13,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:08:32] 2025-06-04 15:08:14,486 | INFO     | all data control threads have been joined
[2025-06-04 17:08:32] 2025-06-04 15:08:14,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:32] 2025-06-04 15:08:14,545 | INFO     | aborting loop
[2025-06-04 17:08:32] 2025-06-04 15:08:14,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:08:32] 2025-06-04 15:08:14,728 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:08:32] 2025-06-04 15:08:14,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:08:32] 2025-06-04 15:08:14,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:08:32] 2025-06-04 15:08:14,790 | INFO     | all job control threads have been joined
[2025-06-04 17:08:32] 2025-06-04 15:08:14,896 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:15,090 | INFO     | all payload control threads have been joined
[2025-06-04 17:08:32] 2025-06-04 15:08:15,216 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:15,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:08:32] 2025-06-04 15:08:15,492 | INFO     | [data] control thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:15,551 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:15,796 | INFO     | [job] control thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:15,912 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,096 | INFO     | [payload] control thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,191 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,253 | INFO     | [job] validate thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,267 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,275 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,390 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,551 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:16,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:32] 2025-06-04 15:08:17,888 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:19,381 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:24,228 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:08:32] 2025-06-04 15:08:25,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:08:32] 2025-06-04 15:08:27,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874979620672)>', '<ExcThread(monitor, started 139874258642688)>']
[2025-06-04 17:08:32] 2025-06-04 15:08:27,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:08:32] 2025-06-04 15:08:27,795 | INFO     | [monitor] control thread has ended
[2025-06-04 17:08:32] 2025-06-04 15:08:32,035 | INFO     | all workflow threads have been joined
[2025-06-04 17:08:32] 2025-06-04 15:08:32,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:08:32] 2025-06-04 15:08:32,036 | INFO     | traces error code: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:32,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:08:32] 2025-06-04 15:08:32,089 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:08:32] 2025-06-04 15:08:32,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:08:32] 2025-06-04 15:08:32,095 [wrapper] pilotpid: 2389089
[2025-06-04 17:08:32] 2025-06-04 15:08:32,098 [wrapper] Pilot exit status: 0
[2025-06-04 17:08:32] 2025-06-04 15:08:32,105 [wrapper] pandaids: 6678245549
[2025-06-04 17:08:32] 2025-06-04 15:08:32,120 [wrapper] cleanup supervisor_pilot 2410221 2389090
[2025-06-04 17:08:32] 2025-06-04 15:08:32,123 [wrapper] Test setup, not cleaning
[2025-06-04 17:08:32] 2025-06-04 15:08:32,126 [wrapper] apfmon messages muted
[2025-06-04 17:08:32] 2025-06-04 15:08:32,128 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:08:32] 2025-06-04 15:08:32,131 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:08:32]  *** Error codes and diagnostics ***
[2025-06-04 17:08:32]     "exeErrorCode": 0,
[2025-06-04 17:08:32]     "exeErrorDiag": "",
[2025-06-04 17:08:32]     "pilotErrorCode": 0,
[2025-06-04 17:08:32]     "pilotErrorDiag": "",
[2025-06-04 17:08:32]  *** Listing of results directory ***
[2025-06-04 17:08:32] total 386260
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:08 queuedata.json
[2025-06-04 17:08:32] -rwx------ 1 boinc boinc     37140 Jun  4 03:09 runpilot2-wrapper.sh
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:08:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:04 run_atlas
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:04 job.xml
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc 217297386 Jun  4 15:04 EVNT.45006593._001995.pool.root.1
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc      6678 Jun  4 15:04 init_data.xml
[2025-06-04 17:08:32] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:04 shared
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:04 input.tar.gz
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:04 boinc_lockfile
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc      2524 Jun  4 15:04 pandaJob.out
[2025-06-04 17:08:32] -rw------- 1 boinc boinc    986811 Jun  4 15:04 agis_schedconf.cvmfs.json
[2025-06-04 17:08:32] -rw------- 1 boinc boinc   1598969 Jun  4 15:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:08:32] drwx------ 4 boinc boinc      4096 Jun  4 15:04 pilot3
[2025-06-04 17:08:32] -rw------- 1 boinc boinc        95 Jun  4 17:07 pilot_heartbeat.json
[2025-06-04 17:08:32] -rw------- 1 boinc boinc 172554600 Jun  4 17:07 HITS.45006595._049748.pool.root.1
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:07 boinc_task_state.xml
[2025-06-04 17:08:32] -rw------- 1 boinc boinc      1017 Jun  4 17:08 memory_monitor_summary.json
[2025-06-04 17:08:32] -rw------- 1 boinc boinc    222267 Jun  4 17:08 log.45006595._049748.job.log.tgz.1
[2025-06-04 17:08:32] -rw------- 1 boinc boinc      7646 Jun  4 17:08 heartbeat.json
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:08 wrapper_checkpoint.txt
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:08 boinc_mmap_file
[2025-06-04 17:08:32] -rw------- 1 boinc boinc      4429 Jun  4 17:08 pilotlog.txt
[2025-06-04 17:08:32] -rw------- 1 boinc boinc    701016 Jun  4 17:08 log.45006595._049748.job.log.1
[2025-06-04 17:08:32] -rw------- 1 boinc boinc       357 Jun  4 17:08 output.list
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:08 runtime_log
[2025-06-04 17:08:32] -rw------- 1 boinc boinc    942080 Jun  4 17:08 result.tar.gz
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc      8743 Jun  4 17:08 runtime_log.err
[2025-06-04 17:08:32] -rw------- 1 boinc boinc       661 Jun  4 17:08 L19NDmIorg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAlmKDmqDi4Uo.diag
[2025-06-04 17:08:32] -rw-r--r-- 1 boinc boinc     21018 Jun  4 17:08 stderr.txt
[2025-06-04 17:08:32] HITS file was successfully produced:
[2025-06-04 17:08:32] -rw------- 1 boinc boinc 172554600 Jun  4 17:07 shared/HITS.pool.root.1
[2025-06-04 17:08:32]  *** Contents of shared directory: ***
[2025-06-04 17:08:32] total 382160
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc 217297386 Jun  4 15:04 ATLAS.root_0
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:04 input.tar.gz
[2025-06-04 17:08:32] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 17:08:32] -rw------- 1 boinc boinc 172554600 Jun  4 17:07 HITS.pool.root.1
[2025-06-04 17:08:32] -rw------- 1 boinc boinc    942080 Jun  4 17:08 result.tar.gz
17:08:33 (2385471): run_atlas exited; CPU time 14422.073841
17:08:33 (2385471): called boinc_finish(0)

</stderr_txt>
]]>

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