Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:40:20 (908573): wrapper (7.7.26015): starting
20:40:20 (908573): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:40:20] Arguments: --nthreads 12
[2025-06-03 20:40:20] Threads: 12
[2025-06-03 20:40:20] Checking for CVMFS
[2025-06-03 20:40:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:40:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:40:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:40:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:40:21] 2.11.5.0 2654 50366 238624 146767 3 264 33781841 45568001 15610 130560 0 389311268 99.750 316020149 26540 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 20:40:21] CVMFS is ok
[2025-06-03 20:40:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:40:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:40:21] Further information can be found at the LHC@home message board.
[2025-06-03 20:40:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:40:21] Checking for apptainer binary...
[2025-06-03 20:40:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:40:21] Running /usr/bin/apptainer --version
[2025-06-03 20:40:21] apptainer version 1.4.0-1.el9
[2025-06-03 20:40:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:40:22] wns0141.triumf.lcg
[2025-06-03 20:40:22] apptainer works
[2025-06-03 20:40:22] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:40:22] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:40:22] Starting ATLAS job with PandaID=6678245503
[2025-06-03 20:40:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:44:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:44:52] 2025-06-04 03:44:36,153 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678245503/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard info from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | wrong length of table data, x=[1749008510.0], y=[2289.0] (must be same and length>=4)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . Timing measurements:
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . get job = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . initial setup = 3 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload setup = 20 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-in = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload execution = 37 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-out = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . log creation = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678245503/pilotlog.txt
[2025-06-03 20:44:52] 2025-06-04 03:44:36,171 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 20:44:52] - Log from pilotlog.txt -
[2025-06-03 20:44:52] 2025-06-04 03:44:36,153 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678245503/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard info from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | wrong length of table data, x=[1749008510.0], y=[2289.0] (must be same and length>=4)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . Timing measurements:
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . get job = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . initial setup = 3 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload setup = 20 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-in = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload execution = 37 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-out = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . log creation = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678245503/pilotlog.txt
[2025-06-03 20:44:52] 2025-06-04 03:44:36,172 | WARNING  | 
[2025-06-03 20:44:52] [begin log extracts]
[2025-06-03 20:44:52] - Log from pilotlog.txt -
[2025-06-03 20:44:52] 2025-06-04 03:44:36,153 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678245503/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard info from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:44:52] 2025-06-04 03:44:36,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:44:52] 2025-06-04 03:44:36,155 | WARNING  | wrong length of table data, x=[1749008510.0], y=[2289.0] (must be same and length>=4)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . Timing measurements:
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . get job = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . initial setup = 3 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload setup = 20 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-in = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . payload execution = 37 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . stage-out = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | . log creation = 0 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | ..............................
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:44:52] 2025-06-04 03:44:36,156 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678245503/pilotlog.txt
[2025-06-03 20:44:52] [end log extracts]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,172 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,173 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 20:44:52] 2025-06-04 03:44:36,350 | INFO     | 
[2025-06-03 20:44:52] 2025-06-04 03:44:36,350 | INFO     | job summary report
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | --------------------------------------------------
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | PanDA job id: 6678245503
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | task id: 45006595
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 20:42:13,947 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | pilot state: failed 
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | transexitcode: 65
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | exeerrorcode: 65
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | exitcode: 65
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | cpuconsumptiontime: 19 s
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | nevents: 0
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | neventsw: 0
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | pid: 918747
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | pgrp: 918747
[2025-06-03 20:44:52] 2025-06-04 03:44:36,351 | INFO     | corecount: 12
[2025-06-03 20:44:52] 2025-06-04 03:44:36,352 | INFO     | event service: False
[2025-06-03 20:44:52] 2025-06-04 03:44:36,352 | INFO     | sizes: {0: 2405010, 1: 2405209, 12: 2405209, 16: 2405443, 23: 2405471, 61: 2428951, 62: 2433186, 64: 2433214, 194: 2433384}
[2025-06-03 20:44:52] 2025-06-04 03:44:36,352 | INFO     | --------------------------------------------------
[2025-06-03 20:44:52] 2025-06-04 03:44:36,352 | INFO     | 
[2025-06-03 20:44:52] 2025-06-04 03:44:36,352 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | job 6678245503 has completed (purged errors)
[2025-06-03 20:44:52] 2025-06-04 03:44:36,375 | INFO     | overall cleanup function is called
[2025-06-03 20:44:52] 2025-06-04 03:44:37,382 | INFO     | --- collectZombieJob: --- 10, [918747]
[2025-06-03 20:44:52] 2025-06-04 03:44:37,382 | INFO     | zombie collector waiting for pid 918747
[2025-06-03 20:44:52] 2025-06-04 03:44:37,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:44:52] 2025-06-04 03:44:37,383 | INFO     | collected zombie processes
[2025-06-03 20:44:52] 2025-06-04 03:44:37,383 | INFO     | will attempt to kill all subprocesses of pid=918747
[2025-06-03 20:44:52] 2025-06-04 03:44:37,999 | INFO     | process IDs to be killed: [918747] (in reverse order)
[2025-06-03 20:44:52] 2025-06-04 03:44:38,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:44:52] 2025-06-04 03:44:38,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:44:52] 2025-06-04 03:44:38,407 | INFO     | did not find any defunct processes belonging to 918747
[2025-06-03 20:44:52] 2025-06-04 03:44:38,443 | INFO     | did not find any defunct processes belonging to 918747
[2025-06-03 20:44:52] 2025-06-04 03:44:38,443 | INFO     | ready for new job
[2025-06-03 20:44:52] 2025-06-04 03:44:38,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:44:52] 2025-06-04 03:44:38,445 | INFO     | **************************************
[2025-06-03 20:44:52] 2025-06-04 03:44:38,445 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:44:52] 2025-06-04 03:44:38,445 | INFO     | **************************************
[2025-06-03 20:44:52] 2025-06-04 03:44:38,446 | INFO     | 
[2025-06-03 20:44:52] 2025-06-04 03:44:38,448 | INFO     | architecture information:
[2025-06-03 20:44:52] 2025-06-04 03:44:38,451 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:44:52] 2025-06-04 03:44:38,561 | INFO     | cat /etc/os-release:
[2025-06-03 20:44:52] NAME="CentOS Linux"
[2025-06-03 20:44:52] VERSION="7 (Core)"
[2025-06-03 20:44:52] ID="centos"
[2025-06-03 20:44:52] ID_LIKE="rhel fedora"
[2025-06-03 20:44:52] VERSION_ID="7"
[2025-06-03 20:44:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:44:52] ANSI_COLOR="0;31"
[2025-06-03 20:44:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:44:52] HOME_URL="https://www.centos.org/"
[2025-06-03 20:44:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:44:52] 
[2025-06-03 20:44:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:44:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:44:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:44:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:44:52] 
[2025-06-03 20:44:52] 2025-06-04 03:44:38,562 | INFO     | **************************************
[2025-06-03 20:44:52] 2025-06-04 03:44:39,065 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 20:44:52] 2025-06-04 03:44:39,135 | INFO     | sufficient remaining disk space (1983671959552 B)
[2025-06-03 20:44:52] 2025-06-04 03:44:39,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:44:52] 2025-06-04 03:44:39,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:44:52] 2025-06-04 03:44:39,135 | INFO     | update_server=False
[2025-06-03 20:44:52] 2025-06-04 03:44:39,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:44:52] 2025-06-04 03:44:39,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:44:52] 2025-06-04 03:44:39,357 | INFO     | all payload control threads have been joined
[2025-06-03 20:44:52] 2025-06-04 03:44:39,541 | INFO     | all job control threads have been joined
[2025-06-03 20:44:52] 2025-06-04 03:44:40,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:44:52] 2025-06-04 03:44:40,006 | INFO     | aborting loop
[2025-06-03 20:44:52] 2025-06-04 03:44:40,019 | INFO     | all data control threads have been joined
[2025-06-03 20:44:52] 2025-06-04 03:44:40,033 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:44:52] 2025-06-04 03:44:40,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:44:52] 2025-06-04 03:44:40,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:44:52] 2025-06-04 03:44:40,141 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,182 | INFO     | [job] validate thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,363 | INFO     | [payload] control thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,449 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,547 | INFO     | [job] control thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,577 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,809 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,863 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:40,920 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:41,016 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:41,025 | INFO     | [data] control thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:41,325 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:41,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:44:52] 2025-06-04 03:44:41,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:42,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:44:52] 2025-06-04 03:44:42,376 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:46,256 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:44:52] 2025-06-04 03:44:46,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713704118080)>', '<ExcThread(monitor, started 139713306408704)>']
[2025-06-03 20:44:52] 2025-06-04 03:44:47,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:44:52] 2025-06-04 03:44:47,077 | INFO     | [monitor] control thread has ended
[2025-06-03 20:44:52] 2025-06-04 03:44:51,384 | INFO     | all workflow threads have been joined
[2025-06-03 20:44:52] 2025-06-04 03:44:51,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:44:52] 2025-06-04 03:44:51,385 | INFO     | traces error code: 0
[2025-06-03 20:44:52] 2025-06-04 03:44:51,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:44:52] 2025-06-04 03:44:51,858 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:44:52] 2025-06-04 03:44:51,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:44:52] 2025-06-04 03:44:51,894 [wrapper] pilotpid: 912128
[2025-06-03 20:44:52] 2025-06-04 03:44:51,927 [wrapper] Pilot exit status: 0
[2025-06-03 20:44:52] 2025-06-04 03:44:52,143 [wrapper] pandaids: 6678245503
[2025-06-03 20:44:52] 2025-06-04 03:44:52,203 [wrapper] cleanup supervisor_pilot  912134 912129
[2025-06-03 20:44:52] 2025-06-04 03:44:52,207 [wrapper] Test setup, not cleaning
[2025-06-03 20:44:52] 2025-06-04 03:44:52,209 [wrapper] apfmon messages muted
[2025-06-03 20:44:52] 2025-06-04 03:44:52,228 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:44:52] 2025-06-04 03:44:52,259 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:44:52]  *** Error codes and diagnostics ***
[2025-06-03 20:44:52]     "exeErrorCode": 65,
[2025-06-03 20:44:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:44:52]     "pilotErrorCode": 1305,
[2025-06-03 20:44:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:44:52]  *** Listing of results directory ***
[2025-06-03 20:44:52] total 212912
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:59 pilot3.tar.gz
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:08 queuedata.json
[2025-06-03 20:44:52] -rwx------. 1 boinc boinc     37140 Jun  3 18:09 runpilot2-wrapper.sh
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:44:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:40 run_atlas
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:40 job.xml
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc 213981759 Jun  3 20:40 EVNT.45006593._001993.pool.root.1
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc      6597 Jun  3 20:40 init_data.xml
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:40 start_atlas.sh
[2025-06-03 20:44:52] drwxrwx--x. 2 boinc boinc      4096 Jun  3 20:40 shared
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc    508887 Jun  3 20:40 input.tar.gz
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:40 boinc_lockfile
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc      2525 Jun  3 20:40 pandaJob.out
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc    986077 Jun  3 20:40 agis_schedconf.cvmfs.json
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc   1603667 Jun  3 20:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:44:52] drwx------. 4 boinc boinc      4096 Jun  3 20:40 pilot3
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc       524 Jun  3 20:42 boinc_task_state.xml
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc       948 Jun  3 20:42 memory_monitor_summary.json
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc     21063 Jun  3 20:42 log.45006595._049702.job.log.tgz.1
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc        95 Jun  3 20:43 pilot_heartbeat.json
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc      8336 Jun  3 20:44 heartbeat.json
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc      4352 Jun  3 20:44 pilotlog.txt
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc     78644 Jun  3 20:44 log.45006595._049702.job.log.1
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc        23 Jun  3 20:44 wrapper_checkpoint.txt
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc       188 Jun  3 20:44 output.list
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:44 runtime_log
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc    122880 Jun  3 20:44 result.tar.gz
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc      8484 Jun  3 20:44 runtime_log.err
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc       645 Jun  3 20:44 5jiMDmIorg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSkmKDmu8paYo.diag
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:44 boinc_mmap_file
[2025-06-03 20:44:52] -rw-r--r--. 1 boinc boinc     21579 Jun  3 20:44 stderr.txt
[2025-06-03 20:44:52] No HITS result produced
[2025-06-03 20:44:52]  *** Contents of shared directory: ***
[2025-06-03 20:44:52] total 209608
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc 213981759 Jun  3 20:40 ATLAS.root_0
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:40 start_atlas.sh
[2025-06-03 20:44:52] -rw-r--r--. 2 boinc boinc    508887 Jun  3 20:40 input.tar.gz
[2025-06-03 20:44:52] -rw-------. 1 boinc boinc    122880 Jun  3 20:44 result.tar.gz
20:44:54 (908573): run_atlas exited; CPU time 28.396647
20:44:54 (908573): called boinc_finish(0)

</stderr_txt>
]]>

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