Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:53:53 (1818960): wrapper (7.7.26015): starting
14:53:53 (1818960): wrapper: running run_atlas (--nthreads 6)
[2025-06-04 14:53:53] Arguments: --nthreads 6
[2025-06-04 14:53:53] Threads: 6
[2025-06-04 14:53:53] Checking for CVMFS
[2025-06-04 14:53:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:53:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:53:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:53:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:53:54] 2.11.5.0 4066018 1882 76164 146769 2 187 47576787 52428801 1858 130560 0 5421495 99.997 517768 104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 14:53:54] CVMFS is ok
[2025-06-04 14:53:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:53:54] Checking for apptainer binary...
[2025-06-04 14:53:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:53:54] Running /usr/bin/apptainer --version
[2025-06-04 14:53:54] apptainer version 1.3.5-1.el9
[2025-06-04 14:53:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:53:54] testio008
[2025-06-04 14:53:54] apptainer works
[2025-06-04 14:53:54] Set ATHENA_PROC_NUMBER=6
[2025-06-04 14:53:54] Set ATHENA_CORE_NUMBER=6
[2025-06-04 14:53:54] Starting ATLAS job with PandaID=6665933999
[2025-06-04 14:53:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:20:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:20:59]  is_tar=False
[2025-06-04 16:20:59]  lfn=log.44871837._050085.job.log.tgz.1
[2025-06-04 16:20:59]  mtime=0
[2025-06-04 16:20:59]  protocol_id=None
[2025-06-04 16:20:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:20:59]  replicas=None
[2025-06-04 16:20:59]  scope=mc23_13p6TeV
[2025-06-04 16:20:59]  status=None
[2025-06-04 16:20:59]  status_code=0
[2025-06-04 16:20:59]  storage_token=
[2025-06-04 16:20:59]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6665933999/log.44871837._050085.job.log.tgz.1
[2025-06-04 16:20:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/c9/log.44871837._050085.job.log.tgz.1
[2025-06-04 16:20:59]  workdir=None
[2025-06-04 16:20:59] ]
[2025-06-04 16:20:59] 2025-06-04 07:20:34,065 | INFO     | transferring file log.44871837._050085.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6665933999/log.44871837._050085.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 16:20:59] 2025-06-04 07:20:34,065 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6665933999/log.44871837._050085.job.log.tgz.1 /var/lib/boinc/slots/2/log.44871837._050085.job
[2025-06-04 16:20:59] 2025-06-04 07:20:34,073 | INFO     | adding to output.list: log.44871837._050085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/c9/log.44871837._050085.job.log.tg
[2025-06-04 16:20:59] 2025-06-04 07:20:34,074 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:20:59] 2025-06-04 07:20:34,074 | INFO     | summary of transferred files:
[2025-06-04 16:20:59] 2025-06-04 07:20:34,074 | INFO     |  -- lfn=log.44871837._050085.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:20:59] 2025-06-04 07:20:34,074 | INFO     | stage-out finished correctly
[2025-06-04 16:20:59] 2025-06-04 07:20:34,928 | WARNING  | process 1829203 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:20:59] 2025-06-04 07:20:34,928 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665933999/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:20:59] 2025-06-04 07:20:34,941 | INFO     | PID=1822657 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 16:20:59] 2025-06-04 07:20:34,941 | INFO     | .. there are 3 such processes running
[2025-06-04 16:20:59] 2025-06-04 07:20:34,970 | INFO     | number of running child processes to parent process 1829203: 1
[2025-06-04 16:20:59] 2025-06-04 07:20:34,971 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:20:59] 2025-06-04 07:20:36,686 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:20:59] 2025-06-04 07:20:36,730 | INFO     | job 6665933999 has state=finished
[2025-06-04 16:20:59] 2025-06-04 07:20:36,730 | INFO     | preparing for final server update for job 6665933999 in state='finished'
[2025-06-04 16:20:59] 2025-06-04 07:20:36,730 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:20:59] 2025-06-04 07:20:36,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:20:59] 2025-06-04 07:20:36,731 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:20:59] 2025-06-04 07:20:36,731 | INFO     | job 6665933999 has finished - writing final server update
[2025-06-04 16:20:59] 2025-06-04 07:20:36,731 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:20:59] 2025-06-04 07:20:36,732 | INFO     | executing command: lscpu
[2025-06-04 16:20:59] 2025-06-04 07:20:36,747 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:20:59] 2025-06-04 07:20:37,473 | INFO     | monitor loop #390: job 0:6665933999 is in state 'finished'
[2025-06-04 16:20:59] 2025-06-04 07:20:37,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,528 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:20:59] 2025-06-04 07:20:39,529 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665933999/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,529 | INFO     | extracted standard info from prmon json
[2025-06-04 16:20:59] 2025-06-04 07:20:39,529 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:20:59] 2025-06-04 07:20:39,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:20:59] 2025-06-04 07:20:39,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:20:59] 2025-06-04 07:20:39,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:20:59] 2025-06-04 07:20:39,532 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:20:59] 2025-06-04 07:20:39,532 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 16:20:59] 2025-06-04 07:20:39,532 | INFO     | sum of deviations: 15525369280.5
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | mean x: 1749019115.5
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | mean y: 2368270.141025641
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | -- intersect: -184561061365.86124
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | intersect: -184561061365.86124
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | chi2: 1.295831958179481
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | -- intersect: -184561061365.86124
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | current memory leak: 105.52 B/s (using 78 data points, chi2=1.30)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,533 | INFO     | ..............................
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . Timing measurements:
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . get job = 0 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . initial setup = 5 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . payload setup = 2 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . stage-in = 0 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . payload execution = 5170 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . stage-out = 0 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | . log creation = 0 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,534 | INFO     | ..............................
[2025-06-04 16:20:59] 2025-06-04 07:20:39,622 | INFO     | 
[2025-06-04 16:20:59] 2025-06-04 07:20:39,622 | INFO     | job summary report
[2025-06-04 16:20:59] 2025-06-04 07:20:39,622 | INFO     | --------------------------------------------------
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | PanDA job id: 6665933999
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | task id: 44871837
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | errors: (none)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | pilot state: finished 
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | transexitcode: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | exeerrorcode: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | exeerrordiag: 
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | exitcode: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | exitmsg: OK
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | cpuconsumptiontime: 26236 s
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | nevents: 400
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | neventsw: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | pid: 1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | pgrp: 1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | corecount: 6
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | event service: False
[2025-06-04 16:20:59] 2025-06-04 07:20:39,623 | INFO     | sizes: {0: 2405183, 2: 2405389, 11: 2405417, 5176: 2431712, 5177: 2440653, 5180: 2440709, 5182: 2441007}
[2025-06-04 16:20:59] 2025-06-04 07:20:39,624 | INFO     | --------------------------------------------------
[2025-06-04 16:20:59] 2025-06-04 07:20:39,624 | INFO     | 
[2025-06-04 16:20:59] 2025-06-04 07:20:39,624 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 16:20:59] 2025-06-04 07:20:39,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:20:59] 2025-06-04 07:20:39,640 | INFO     | job 6665933999 has completed (purged errors)
[2025-06-04 16:20:59] 2025-06-04 07:20:39,640 | INFO     | overall cleanup function is called
[2025-06-04 16:20:59] 2025-06-04 07:20:40,646 | INFO     | --- collectZombieJob: --- 10, [1829203]
[2025-06-04 16:20:59] 2025-06-04 07:20:40,646 | INFO     | zombie collector waiting for pid 1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:40,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:20:59] 2025-06-04 07:20:40,647 | INFO     | collected zombie processes
[2025-06-04 16:20:59] 2025-06-04 07:20:40,647 | INFO     | will attempt to kill all subprocesses of pid=1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:40,717 | INFO     | process IDs to be killed: [1829203] (in reverse order)
[2025-06-04 16:20:59] 2025-06-04 07:20:40,756 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:20:59] 2025-06-04 07:20:40,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:20:59] 2025-06-04 07:20:40,759 | INFO     | did not find any defunct processes belonging to 1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:40,762 | INFO     | did not find any defunct processes belonging to 1829203
[2025-06-04 16:20:59] 2025-06-04 07:20:40,763 | INFO     | ready for new job
[2025-06-04 16:20:59] 2025-06-04 07:20:40,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | **************************************
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | **************************************
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | 
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | architecture information:
[2025-06-04 16:20:59] 2025-06-04 07:20:40,764 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:20:59] 2025-06-04 07:20:40,772 | INFO     | cat /etc/os-release:
[2025-06-04 16:20:59] NAME="CentOS Linux"
[2025-06-04 16:20:59] VERSION="7 (Core)"
[2025-06-04 16:20:59] ID="centos"
[2025-06-04 16:20:59] ID_LIKE="rhel fedora"
[2025-06-04 16:20:59] VERSION_ID="7"
[2025-06-04 16:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:20:59] ANSI_COLOR="0;31"
[2025-06-04 16:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:20:59] HOME_URL="https://www.centos.org/"
[2025-06-04 16:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:20:59] 
[2025-06-04 16:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:20:59] 
[2025-06-04 16:20:59] 2025-06-04 07:20:40,773 | INFO     | **************************************
[2025-06-04 16:20:59] 2025-06-04 07:20:41,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 16:20:59] 2025-06-04 07:20:41,282 | INFO     | sufficient remaining disk space (275713622016 B)
[2025-06-04 16:20:59] 2025-06-04 07:20:41,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:20:59] 2025-06-04 07:20:41,282 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:20:59] 2025-06-04 07:20:41,282 | INFO     | update_server=False
[2025-06-04 16:20:59] 2025-06-04 07:20:41,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | INFO     | aborting loop
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:20:59] 2025-06-04 07:20:41,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:20:59] 2025-06-04 07:20:41,425 | INFO     | all data control threads have been joined
[2025-06-04 16:20:59] 2025-06-04 07:20:41,722 | INFO     | all payload control threads have been joined
[2025-06-04 16:20:59] 2025-06-04 07:20:42,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:20:59] 2025-06-04 07:20:42,287 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,287 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,288 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,355 | INFO     | all job control threads have been joined
[2025-06-04 16:20:59] 2025-06-04 07:20:42,416 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,430 | INFO     | [data] control thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,462 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,685 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,727 | INFO     | [payload] control thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:42,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:20:59] 2025-06-04 07:20:42,805 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:43,002 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:43,360 | INFO     | [job] control thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:43,531 | INFO     | [job] validate thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:43,642 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:44,135 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:46,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:51,435 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:20:59] 2025-06-04 07:20:52,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:20:59] 2025-06-04 07:20:54,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038417315648)>', '<ExcThread(monitor, started 140037920376576)>']
[2025-06-04 16:20:59] 2025-06-04 07:20:54,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:20:59] 2025-06-04 07:20:54,348 | INFO     | [monitor] control thread has ended
[2025-06-04 16:20:59] 2025-06-04 07:20:59,347 | INFO     | all workflow threads have been joined
[2025-06-04 16:20:59] 2025-06-04 07:20:59,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:20:59] 2025-06-04 07:20:59,348 | INFO     | traces error code: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:59,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:20:59] 2025-06-04 07:20:59,436 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:20:59] 2025-06-04 07:20:59,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:20:59] 2025-06-04 07:20:59,439 [wrapper] pilotpid: 1822657
[2025-06-04 16:20:59] 2025-06-04 07:20:59,440 [wrapper] Pilot exit status: 0
[2025-06-04 16:20:59] 2025-06-04 07:20:59,445 [wrapper] pandaids: 6665933999
[2025-06-04 16:20:59] 2025-06-04 07:20:59,460 [wrapper] cleanup supervisor_pilot 1887946 1822658
[2025-06-04 16:20:59] 2025-06-04 07:20:59,462 [wrapper] Test setup, not cleaning
[2025-06-04 16:20:59] 2025-06-04 07:20:59,463 [wrapper] apfmon messages muted
[2025-06-04 16:20:59] 2025-06-04 07:20:59,465 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:20:59] 2025-06-04 07:20:59,466 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:20:59]  *** Error codes and diagnostics ***
[2025-06-04 16:20:59]     "exeErrorCode": 0,
[2025-06-04 16:20:59]     "exeErrorDiag": "",
[2025-06-04 16:20:59]     "pilotErrorCode": 0,
[2025-06-04 16:20:59]     "pilotErrorDiag": "",
[2025-06-04 16:20:59]  *** Listing of results directory ***
[2025-06-04 16:20:59] total 412528
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc    495897 May 26 20:13 pilot3.tar.gz
[2025-06-04 16:20:59] -rwx------. 1 boinc boinc     37140 May 26 20:35 runpilot2-wrapper.sh
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc      5111 May 26 20:35 queuedata.json
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:20:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:53 run_atlas
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:53 job.xml
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:53 start_atlas.sh
[2025-06-04 16:20:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:53 shared
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc    508875 Jun  4 14:53 input.tar.gz
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc      9509 Jun  4 14:53 init_data.xml
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc 222068901 Jun  4 14:53 EVNT.44871834._001995.pool.root.1
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:53 boinc_lockfile
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc      2558 Jun  4 14:53 pandaJob.out
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc    986745 Jun  4 14:53 agis_schedconf.cvmfs.json
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc   1603667 Jun  4 14:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:20:59] drwx------. 4 boinc boinc      4096 Jun  4 14:54 pilot3
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc 194975728 Jun  4 16:20 HITS.44871837._050085.pool.root.1
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc       529 Jun  4 16:20 boinc_task_state.xml
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc      1022 Jun  4 16:20 memory_monitor_summary.json
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc    269339 Jun  4 16:20 log.44871837._050085.job.log.tgz.1
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc        95 Jun  4 16:20 pilot_heartbeat.json
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc      7666 Jun  4 16:20 heartbeat.json
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:20 boinc_mmap_file
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc        27 Jun  4 16:20 wrapper_checkpoint.txt
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc      4549 Jun  4 16:20 pilotlog.txt
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc    511493 Jun  4 16:20 log.44871837._050085.job.log.1
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc       357 Jun  4 16:20 output.list
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:20 runtime_log
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc    798720 Jun  4 16:20 result.tar.gz
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc      8617 Jun  4 16:20 runtime_log.err
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc       642 Jun  4 16:20 CUgKDmqHld7n9Rq4apOajLDm4fhM0noT9bVof3QYDmc4PKDmfMC4cn.diag
[2025-06-04 16:20:59] -rw-r--r--. 1 boinc boinc     21254 Jun  4 16:20 stderr.txt
[2025-06-04 16:20:59] HITS file was successfully produced:
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc 194975728 Jun  4 16:20 shared/HITS.pool.root.1
[2025-06-04 16:20:59]  *** Contents of shared directory: ***
[2025-06-04 16:20:59] total 408572
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:53 start_atlas.sh
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc    508875 Jun  4 14:53 input.tar.gz
[2025-06-04 16:20:59] -rw-r--r--. 2 boinc boinc 222068901 Jun  4 14:53 ATLAS.root_0
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc 194975728 Jun  4 16:20 HITS.pool.root.1
[2025-06-04 16:20:59] -rw-------. 1 boinc boinc    798720 Jun  4 16:20 result.tar.gz
16:21:00 (1818960): run_atlas exited; CPU time 26272.278914
16:21:00 (1818960): called boinc_finish(0)

</stderr_txt>
]]>

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