Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:51:00 (39073): wrapper (7.7.26015): starting
23:51:00 (39073): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:51:00] Arguments: --nthreads 8
[2025-06-03 23:51:00] Threads: 8
[2025-06-03 23:51:00] Checking for CVMFS
[2025-06-03 23:51:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:51:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:51:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:51:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:51:00] 2.11.2.0 7041 28265 231940 146767 1 604 13594273 18432000 11450 130560 0 114919129 99.585 94109041 30843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:51:00] CVMFS is ok
[2025-06-03 23:51:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:51:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:51:00] Further information can be found at the LHC@home message board.
[2025-06-03 23:51:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:51:00] Checking for apptainer binary...
[2025-06-03 23:51:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:51:00] Running /usr/bin/apptainer --version
[2025-06-03 23:51:01] apptainer version 1.3.2-1.el7
[2025-06-03 23:51:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:51:01] c-211-33-2.aglt2.org
[2025-06-03 23:51:01] apptainer works
[2025-06-03 23:51:01] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:51:01] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:51:01] Starting ATLAS job with PandaID=6677978593
[2025-06-03 23:51:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:18:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:18:32]  is_tar=False
[2025-06-04 01:18:32]  lfn=log.45006595._044034.job.log.tgz.1
[2025-06-04 01:18:32]  mtime=0
[2025-06-04 01:18:32]  protocol_id=None
[2025-06-04 01:18:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:18:32]  replicas=None
[2025-06-04 01:18:32]  scope=mc23_13p6TeV
[2025-06-04 01:18:32]  status=None
[2025-06-04 01:18:32]  status_code=0
[2025-06-04 01:18:32]  storage_token=
[2025-06-04 01:18:32]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6677978593/log.45006595._044034.job.log.tgz.1
[2025-06-04 01:18:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/06/log.45006595._044034.job.log.tgz.1
[2025-06-04 01:18:32]  workdir=None
[2025-06-04 01:18:32] ]
[2025-06-04 01:18:32] 2025-06-04 05:18:07,266 | INFO     | transferring file log.45006595._044034.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6677978593/log.45006595._044034.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:18:32] 2025-06-04 05:18:07,267 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6677978593/log.45006595._044034.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._044034.job
[2025-06-04 01:18:32] 2025-06-04 05:18:07,292 | INFO     | adding to output.list: log.45006595._044034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/06/log.45006595._044034.job.log.tg
[2025-06-04 01:18:32] 2025-06-04 05:18:07,293 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:18:32] 2025-06-04 05:18:07,293 | INFO     | summary of transferred files:
[2025-06-04 01:18:32] 2025-06-04 05:18:07,293 | INFO     |  -- lfn=log.45006595._044034.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:18:32] 2025-06-04 05:18:07,293 | INFO     | stage-out finished correctly
[2025-06-04 01:18:32] 2025-06-04 05:18:07,618 | INFO     | monitor loop #388: job 0:6677978593 is in state 'finished'
[2025-06-04 01:18:32] 2025-06-04 05:18:07,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:18:32] 2025-06-04 05:18:08,804 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:18:32] 2025-06-04 05:18:09,484 | INFO     | job 6677978593 has state=finished
[2025-06-04 01:18:32] 2025-06-04 05:18:09,484 | INFO     | preparing for final server update for job 6677978593 in state='finished'
[2025-06-04 01:18:32] 2025-06-04 05:18:09,486 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:18:32] 2025-06-04 05:18:09,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:18:32] 2025-06-04 05:18:09,486 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:18:32] 2025-06-04 05:18:09,486 | INFO     | job 6677978593 has finished - writing final server update
[2025-06-04 01:18:32] 2025-06-04 05:18:09,486 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:18:32] 2025-06-04 05:18:09,492 | INFO     | executing command: lscpu
[2025-06-04 01:18:32] 2025-06-04 05:18:09,558 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:18:32] 2025-06-04 05:18:10,122 | INFO     | monitor loop #389: job 0:6677978593 is in state 'finished'
[2025-06-04 01:18:32] 2025-06-04 05:18:10,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:18:32] 2025-06-04 05:18:11,457 | INFO     | PID=44684 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 01:18:32] 2025-06-04 05:18:11,457 | INFO     | .. there are 18 such processes running
[2025-06-04 01:18:32] 2025-06-04 05:18:12,625 | INFO     | monitor loop #390: job 0:6677978593 is in state 'finished'
[2025-06-04 01:18:32] 2025-06-04 05:18:12,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:18:32] 2025-06-04 05:18:13,942 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:18:32] 2025-06-04 05:18:13,942 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677978593/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:18:32] 2025-06-04 05:18:13,943 | INFO     | extracted standard info from prmon json
[2025-06-04 01:18:32] 2025-06-04 05:18:13,943 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:18:32] 2025-06-04 05:18:13,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:18:32] 2025-06-04 05:18:13,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:18:32] 2025-06-04 05:18:13,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | sum of deviations: -751397207.0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | mean x: 1749011780.0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | mean y: 2491039.898734177
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | -- intersect: 8599991466.45023
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | intersect: 8599991466.45023
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | chi2: 0.0034460487375074064
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | -- intersect: 8599991466.45023
[2025-06-04 01:18:32] 2025-06-04 05:18:13,945 | INFO     | current memory leak: -4.92 B/s (using 79 data points, chi2=0.00)
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | ..............................
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . Timing measurements:
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . get job = 0 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . initial setup = 2 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . payload setup = 6 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . stage-in = 0 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . payload execution = 5190 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . stage-out = 0 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | . log creation = 0 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,946 | INFO     | ..............................
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | 
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | job summary report
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | --------------------------------------------------
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | PanDA job id: 6677978593
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | task id: 45006595
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | errors: (none)
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | pilot state: finished 
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | transexitcode: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | exeerrorcode: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,998 | INFO     | exeerrordiag: 
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | exitcode: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | exitmsg: OK
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | cpuconsumptiontime: 35033 s
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | nevents: 400
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | neventsw: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | pid: 51145
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | pgrp: 51145
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | corecount: 8
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | event service: False
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5200: 2431757, 5202: 2440698, 5203: 2440754, 5208: 2441052}
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | --------------------------------------------------
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | 
[2025-06-04 01:18:32] 2025-06-04 05:18:13,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-04 01:18:32] 2025-06-04 05:18:14,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:18:32] 2025-06-04 05:18:14,017 | INFO     | job 6677978593 has completed (purged errors)
[2025-06-04 01:18:32] 2025-06-04 05:18:14,018 | INFO     | overall cleanup function is called
[2025-06-04 01:18:32] 2025-06-04 05:18:15,025 | INFO     | --- collectZombieJob: --- 10, [51145]
[2025-06-04 01:18:32] 2025-06-04 05:18:15,026 | INFO     | zombie collector waiting for pid 51145
[2025-06-04 01:18:32] 2025-06-04 05:18:15,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:18:32] 2025-06-04 05:18:15,026 | INFO     | collected zombie processes
[2025-06-04 01:18:32] 2025-06-04 05:18:15,026 | INFO     | will attempt to kill all subprocesses of pid=51145
[2025-06-04 01:18:32] 2025-06-04 05:18:15,343 | INFO     | process IDs to be killed: [51145] (in reverse order)
[2025-06-04 01:18:32] 2025-06-04 05:18:15,417 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:18:32] 2025-06-04 05:18:15,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:18:32] 2025-06-04 05:18:15,425 | INFO     | did not find any defunct processes belonging to 51145
[2025-06-04 01:18:32] 2025-06-04 05:18:15,431 | INFO     | did not find any defunct processes belonging to 51145
[2025-06-04 01:18:32] 2025-06-04 05:18:15,431 | INFO     | ready for new job
[2025-06-04 01:18:32] 2025-06-04 05:18:15,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:18:32] 2025-06-04 05:18:15,432 | INFO     | **************************************
[2025-06-04 01:18:32] 2025-06-04 05:18:15,433 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:18:32] 2025-06-04 05:18:15,433 | INFO     | **************************************
[2025-06-04 01:18:32] 2025-06-04 05:18:15,433 | INFO     | 
[2025-06-04 01:18:32] 2025-06-04 05:18:15,436 | INFO     | architecture information:
[2025-06-04 01:18:32] 2025-06-04 05:18:15,436 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:18:32] 2025-06-04 05:18:15,594 | INFO     | cat /etc/os-release:
[2025-06-04 01:18:32] NAME="CentOS Linux"
[2025-06-04 01:18:32] VERSION="7 (Core)"
[2025-06-04 01:18:32] ID="centos"
[2025-06-04 01:18:32] ID_LIKE="rhel fedora"
[2025-06-04 01:18:32] VERSION_ID="7"
[2025-06-04 01:18:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:18:32] ANSI_COLOR="0;31"
[2025-06-04 01:18:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:18:32] HOME_URL="https://www.centos.org/"
[2025-06-04 01:18:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:18:32] 
[2025-06-04 01:18:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:18:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:18:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:18:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:18:32] 
[2025-06-04 01:18:32] 2025-06-04 05:18:15,594 | INFO     | **************************************
[2025-06-04 01:18:32] 2025-06-04 05:18:16,097 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | INFO     | sufficient remaining disk space (104037613568 B)
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | INFO     | update_server=False
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:18:32] 2025-06-04 05:18:16,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:18:32] 2025-06-04 05:18:16,146 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:18:32] 2025-06-04 05:18:16,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:18:32] 2025-06-04 05:18:16,146 | INFO     | aborting loop
[2025-06-04 01:18:32] 2025-06-04 05:18:16,147 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:18:32] 2025-06-04 05:18:16,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:18:32] 2025-06-04 05:18:16,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:18:32] 2025-06-04 05:18:17,100 | INFO     | all payload control threads have been joined
[2025-06-04 01:18:32] 2025-06-04 05:18:17,101 | INFO     | all data control threads have been joined
[2025-06-04 01:18:32] 2025-06-04 05:18:17,148 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,152 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,288 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,298 | INFO     | [job] validate thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,332 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,425 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:17,617 | INFO     | all job control threads have been joined
[2025-06-04 01:18:32] 2025-06-04 05:18:17,657 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,101 | INFO     | [payload] control thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,101 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,105 | INFO     | [data] control thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,152 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,199 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:18,622 | INFO     | [job] control thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:19,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:18:32] 2025-06-04 05:18:19,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:18:32] 2025-06-04 05:18:20,013 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:23,448 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:26,204 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:18:32] 2025-06-04 05:18:27,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:18:32] 2025-06-04 05:18:27,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578270943040)>', '<ExcThread(monitor, started 140577685362432)>']
[2025-06-04 01:18:32] 2025-06-04 05:18:28,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:18:32] 2025-06-04 05:18:28,209 | INFO     | [monitor] control thread has ended
[2025-06-04 01:18:32] 2025-06-04 05:18:32,500 | INFO     | all workflow threads have been joined
[2025-06-04 01:18:32] 2025-06-04 05:18:32,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:18:32] 2025-06-04 05:18:32,501 | INFO     | traces error code: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:32,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:18:32] 2025-06-04 05:18:32,609 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:18:32] 2025-06-04 05:18:32,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:18:32] 2025-06-04 05:18:32,614 [wrapper] pilotpid: 44684
[2025-06-04 01:18:32] 2025-06-04 05:18:32,616 [wrapper] Pilot exit status: 0
[2025-06-04 01:18:32] 2025-06-04 05:18:32,651 [wrapper] pandaids: 6677978593
[2025-06-04 01:18:32] 2025-06-04 05:18:32,720 [wrapper] cleanup supervisor_pilot 272919 44685
[2025-06-04 01:18:32] 2025-06-04 05:18:32,722 [wrapper] Test setup, not cleaning
[2025-06-04 01:18:32] 2025-06-04 05:18:32,725 [wrapper] apfmon messages muted
[2025-06-04 01:18:32] 2025-06-04 05:18:32,727 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:18:32] 2025-06-04 05:18:32,730 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:18:32]  *** Error codes and diagnostics ***
[2025-06-04 01:18:32]     "exeErrorCode": 0,
[2025-06-04 01:18:32]     "exeErrorDiag": "",
[2025-06-04 01:18:32]     "pilotErrorCode": 0,
[2025-06-04 01:18:32]     "pilotErrorDiag": "",
[2025-06-04 01:18:32]  *** Listing of results directory ***
[2025-06-04 01:18:32] total 391676
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 15:41 pilot3.tar.gz
[2025-06-04 01:18:32] -rwx------ 1 boincer umatlas     37140 Jun  3 15:51 runpilot2-wrapper.sh
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 15:51 queuedata.json
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:18:32] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:50 run_atlas
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:50 job.xml
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas 215253524 Jun  3 23:51 EVNT.45006593._001765.pool.root.1
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:51 start_atlas.sh
[2025-06-04 01:18:32] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:51 shared
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 23:51 input.tar.gz
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:51 boinc_lockfile
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 23:51 pandaJob.out
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas    986077 Jun  3 23:51 agis_schedconf.cvmfs.json
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas   1603667 Jun  3 23:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:18:32] drwx------ 4 boincer umatlas      4096 Jun  3 23:51 pilot3
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas      6298 Jun  4 01:09 init_data.xml
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas 180358294 Jun  4 01:17 HITS.45006595._044034.pool.root.1
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:17 boinc_task_state.xml
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas        95 Jun  4 01:17 pilot_heartbeat.json
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas      1051 Jun  4 01:18 memory_monitor_summary.json
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas    308939 Jun  4 01:18 log.45006595._044034.job.log.tgz.1
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas      7739 Jun  4 01:18 heartbeat.json
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:18 boinc_mmap_file
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:18 wrapper_checkpoint.txt
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas      4549 Jun  4 01:18 pilotlog.txt
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas    506278 Jun  4 01:18 log.45006595._044034.job.log.1
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas       357 Jun  4 01:18 output.list
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:18 runtime_log
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas    829440 Jun  4 01:18 result.tar.gz
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 01:18 runtime_log.err
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas       659 Jun  4 01:18 5JGKDm4qmg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEwlKDmM7y2Um.diag
[2025-06-04 01:18:32] -rw-r--r-- 1 boincer umatlas     21535 Jun  4 01:18 stderr.txt
[2025-06-04 01:18:32] HITS file was successfully produced:
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas 180358294 Jun  4 01:17 shared/HITS.pool.root.1
[2025-06-04 01:18:32]  *** Contents of shared directory: ***
[2025-06-04 01:18:32] total 387680
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas 215253524 Jun  3 23:51 ATLAS.root_0
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:51 start_atlas.sh
[2025-06-04 01:18:32] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 23:51 input.tar.gz
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas 180358294 Jun  4 01:17 HITS.pool.root.1
[2025-06-04 01:18:32] -rw------- 1 boincer umatlas    829440 Jun  4 01:18 result.tar.gz
01:18:34 (39073): run_atlas exited; CPU time 35164.716084
01:18:34 (39073): called boinc_finish(0)

</stderr_txt>
]]>

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