Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:42 (470441): wrapper (7.7.26015): starting
18:06:42 (470441): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 18:06:42] Arguments: --nthreads 12
[2025-06-04 18:06:42] Threads: 12
[2025-06-04 18:06:42] Checking for CVMFS
[2025-06-04 18:06:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:06:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:06:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:06:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:06:42] 2.12.7.0 2877684 2611 91324 146786 3 187 3480379 4097025 0 130560 0 4272502 99.995 674012 8036 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 18:06:42] CVMFS is ok
[2025-06-04 18:06:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:06:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:06:42] Further information can be found at the LHC@home message board.
[2025-06-04 18:06:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:06:42] Checking for apptainer binary...
[2025-06-04 18:06:42] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 18:06:42] apptainer is not installed, using version from CVMFS
[2025-06-04 18:06:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:06:42] pckelar2.cern.ch
[2025-06-04 18:06:42] apptainer works
[2025-06-04 18:06:42] Set ATHENA_PROC_NUMBER=12
[2025-06-04 18:06:42] Set ATHENA_CORE_NUMBER=12
[2025-06-04 18:06:42] Starting ATLAS job with PandaID=6678153497
[2025-06-04 18:06:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:45:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:45:12]  guid=6194e0f2-5d92-4d4e-b31f-45c40a77db32
[2025-06-04 18:45:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 18:45:12]  is_altstaged=None
[2025-06-04 18:45:12]  is_tar=False
[2025-06-04 18:45:12]  lfn=log.45006595._047515.job.log.tgz.1
[2025-06-04 18:45:12]  mtime=0
[2025-06-04 18:45:12]  protocol_id=None
[2025-06-04 18:45:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:45:12]  replicas=None
[2025-06-04 18:45:12]  scope=mc23_13p6TeV
[2025-06-04 18:45:12]  status=None
[2025-06-04 18:45:12]  status_code=0
[2025-06-04 18:45:12]  storage_token=
[2025-06-04 18:45:12]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678153497/log.45006595._047515.job.log.tgz.1
[2025-06-04 18:45:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9b/log.45006595._047515.job.log.tgz.1
[2025-06-04 18:45:12]  workdir=None
[2025-06-04 18:45:12] ]
[2025-06-04 18:45:12] 2025-06-04 16:44:51,366 | INFO     | transferring file log.45006595._047515.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678153497/log.45006595._047515.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 18:45:12] 2025-06-04 16:44:51,366 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678153497/log.45006595._047515.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._047515.job
[2025-06-04 18:45:12] 2025-06-04 16:44:51,376 | INFO     | adding to output.list: log.45006595._047515.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9b/log.45006595._047515.job.log.tg
[2025-06-04 18:45:12] 2025-06-04 16:44:51,377 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:45:12] 2025-06-04 16:44:51,377 | INFO     | summary of transferred files:
[2025-06-04 18:45:12] 2025-06-04 16:44:51,377 | INFO     |  -- lfn=log.45006595._047515.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:45:12] 2025-06-04 16:44:51,377 | INFO     | stage-out finished correctly
[2025-06-04 18:45:12] 2025-06-04 16:44:52,055 | INFO     | PID=474200 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 18:45:12] 2025-06-04 16:44:53,477 | INFO     | monitor loop #179: job 0:6678153497 is in state 'finished'
[2025-06-04 18:45:12] 2025-06-04 16:44:53,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:45:12] 2025-06-04 16:44:54,603 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | job 6678153497 has state=finished
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | preparing for final server update for job 6678153497 in state='finished'
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:45:12] 2025-06-04 16:44:54,970 | INFO     | job 6678153497 has finished - writing final server update
[2025-06-04 18:45:12] 2025-06-04 16:44:54,971 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:45:12] 2025-06-04 16:44:54,972 | INFO     | executing command: lscpu
[2025-06-04 18:45:12] 2025-06-04 16:44:54,995 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:45:12] 2025-06-04 16:44:55,981 | INFO     | monitor loop #180: job 0:6678153497 is in state 'finished'
[2025-06-04 18:45:12] 2025-06-04 16:44:55,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:45:12] 2025-06-04 16:44:58,483 | INFO     | monitor loop #181: job 0:6678153497 is in state 'finished'
[2025-06-04 18:45:12] 2025-06-04 16:44:58,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,036 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 18:45:12] 2025-06-04 16:44:59,036 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678153497/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,037 | INFO     | extracted standard info from prmon json
[2025-06-04 18:45:12] 2025-06-04 16:44:59,037 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:45:12] 2025-06-04 16:44:59,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:45:12] 2025-06-04 16:44:59,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:45:12] 2025-06-04 16:44:59,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | sum of deviations: 258471365.49999997
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | mean x: 1749054421.5
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | mean y: 2736436.433333333
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | -- intersect: -54054817393.591
[2025-06-04 18:45:12] 2025-06-04 16:44:59,038 | INFO     | intersect: -54054817393.591
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | chi2: 0.0003419630145727998
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | -- intersect: -54054817393.591
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | current memory leak: 30.91 B/s (using 30 data points, chi2=0.00)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | ..............................
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . Timing measurements:
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . get job = 0 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . initial setup = 1 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . payload setup = 5 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . stage-in = 0 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . payload execution = 2258 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . stage-out = 0 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | . log creation = 0 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,039 | INFO     | ..............................
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | 
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | job summary report
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | --------------------------------------------------
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | PanDA job id: 6678153497
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | task id: 45006595
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | errors: (none)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | pilot state: finished 
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | transexitcode: 0
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | exeerrorcode: 0
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | exeerrordiag: 
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | exitcode: 0
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | exitmsg: OK
[2025-06-04 18:45:12] 2025-06-04 16:44:59,567 | INFO     | cpuconsumptiontime: 24238 s
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | nevents: 400
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | neventsw: 0
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | pid: 481505
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | pgrp: 481505
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | corecount: 12
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | event service: False
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | sizes: {0: 2397171, 1: 2397370, 4: 2397576, 11: 2397604, 2267: 2422640, 2268: 2431764, 2271: 2431764, 2276: 2431934}
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | --------------------------------------------------
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | 
[2025-06-04 18:45:12] 2025-06-04 16:44:59,568 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 18:45:12] 2025-06-04 16:44:59,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | job 6678153497 has completed (purged errors)
[2025-06-04 18:45:12] 2025-06-04 16:44:59,587 | INFO     | overall cleanup function is called
[2025-06-04 18:45:12] 2025-06-04 16:45:00,594 | INFO     | --- collectZombieJob: --- 10, [481505]
[2025-06-04 18:45:12] 2025-06-04 16:45:00,594 | INFO     | zombie collector waiting for pid 481505
[2025-06-04 18:45:12] 2025-06-04 16:45:00,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:45:12] 2025-06-04 16:45:00,595 | INFO     | collected zombie processes
[2025-06-04 18:45:12] 2025-06-04 16:45:00,595 | INFO     | will attempt to kill all subprocesses of pid=481505
[2025-06-04 18:45:12] 2025-06-04 16:45:00,676 | INFO     | process IDs to be killed: [481505] (in reverse order)
[2025-06-04 18:45:12] 2025-06-04 16:45:00,708 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:45:12] 2025-06-04 16:45:00,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:45:12] 2025-06-04 16:45:00,709 | INFO     | did not find any defunct processes belonging to 481505
[2025-06-04 18:45:12] 2025-06-04 16:45:00,711 | INFO     | did not find any defunct processes belonging to 481505
[2025-06-04 18:45:12] 2025-06-04 16:45:00,711 | INFO     | ready for new job
[2025-06-04 18:45:12] 2025-06-04 16:45:00,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:45:12] 2025-06-04 16:45:00,712 | INFO     | **************************************
[2025-06-04 18:45:12] 2025-06-04 16:45:00,713 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:45:12] 2025-06-04 16:45:00,713 | INFO     | **************************************
[2025-06-04 18:45:12] 2025-06-04 16:45:00,713 | INFO     | 
[2025-06-04 18:45:12] 2025-06-04 16:45:00,713 | INFO     | architecture information:
[2025-06-04 18:45:12] 2025-06-04 16:45:00,714 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:45:12] 2025-06-04 16:45:00,723 | INFO     | cat /etc/os-release:
[2025-06-04 18:45:12] NAME="CentOS Linux"
[2025-06-04 18:45:12] VERSION="7 (Core)"
[2025-06-04 18:45:12] ID="centos"
[2025-06-04 18:45:12] ID_LIKE="rhel fedora"
[2025-06-04 18:45:12] VERSION_ID="7"
[2025-06-04 18:45:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:45:12] ANSI_COLOR="0;31"
[2025-06-04 18:45:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:45:12] HOME_URL="https://www.centos.org/"
[2025-06-04 18:45:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:45:12] 
[2025-06-04 18:45:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:45:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:45:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:45:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:45:12] 
[2025-06-04 18:45:12] 2025-06-04 16:45:00,723 | INFO     | **************************************
[2025-06-04 18:45:12] 2025-06-04 16:45:01,226 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 18:45:12] 2025-06-04 16:45:01,237 | INFO     | sufficient remaining disk space (232307818496 B)
[2025-06-04 18:45:12] 2025-06-04 16:45:01,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:45:12] 2025-06-04 16:45:01,238 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:45:12] 2025-06-04 16:45:01,238 | INFO     | update_server=False
[2025-06-04 18:45:12] 2025-06-04 16:45:01,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:45:12] 2025-06-04 16:45:01,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:45:12] 2025-06-04 16:45:01,731 | INFO     | all job control threads have been joined
[2025-06-04 18:45:12] 2025-06-04 16:45:01,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:45:12] 2025-06-04 16:45:01,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:45:12] 2025-06-04 16:45:01,992 | INFO     | aborting loop
[2025-06-04 18:45:12] 2025-06-04 16:45:02,042 | INFO     | all data control threads have been joined
[2025-06-04 18:45:12] 2025-06-04 16:45:02,086 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:45:12] 2025-06-04 16:45:02,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:45:12] 2025-06-04 16:45:02,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:45:12] 2025-06-04 16:45:02,243 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,387 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,414 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,550 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,627 | INFO     | all payload control threads have been joined
[2025-06-04 18:45:12] 2025-06-04 16:45:02,737 | INFO     | [job] control thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:02,997 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,048 | INFO     | [data] control thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,168 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,455 | INFO     | [job] validate thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,517 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,632 | INFO     | [payload] control thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,741 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:03,940 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:04,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:45:12] 2025-06-04 16:45:05,106 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:05,244 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:45:12] 2025-06-04 16:45:06,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995552720704)>', '<ExcThread(monitor, started 139995146852096)>']
[2025-06-04 18:45:12] 2025-06-04 16:45:07,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:45:12] 2025-06-04 16:45:07,112 | INFO     | [monitor] control thread has ended
[2025-06-04 18:45:12] 2025-06-04 16:45:11,920 | INFO     | all workflow threads have been joined
[2025-06-04 18:45:12] 2025-06-04 16:45:11,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:45:12] 2025-06-04 16:45:11,920 | INFO     | traces error code: 0
[2025-06-04 18:45:12] 2025-06-04 16:45:11,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:45:12] 2025-06-04 16:45:11,996 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:45:12] 2025-06-04 16:45:11,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:45:12] 2025-06-04 16:45:12,001 [wrapper] pilotpid: 474200
[2025-06-04 18:45:12] 2025-06-04 16:45:12,004 [wrapper] Pilot exit status: 0
[2025-06-04 18:45:12] 2025-06-04 16:45:12,013 [wrapper] pandaids: 6678153497
[2025-06-04 18:45:12] 2025-06-04 16:45:12,033 [wrapper] cleanup supervisor_pilot  491893 474201
[2025-06-04 18:45:12] 2025-06-04 16:45:12,035 [wrapper] Test setup, not cleaning
[2025-06-04 18:45:12] 2025-06-04 16:45:12,037 [wrapper] apfmon messages muted
[2025-06-04 18:45:12] 2025-06-04 16:45:12,039 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:45:12] 2025-06-04 16:45:12,041 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:45:12]  *** Error codes and diagnostics ***
[2025-06-04 18:45:12]     "exeErrorCode": 0,
[2025-06-04 18:45:12]     "exeErrorDiag": "",
[2025-06-04 18:45:12]     "pilotErrorCode": 0,
[2025-06-04 18:45:12]     "pilotErrorDiag": "",
[2025-06-04 18:45:12]  *** Listing of results directory ***
[2025-06-04 18:45:12] total 388880
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:45 queuedata.json
[2025-06-04 18:45:12] -rwx------ 1 boinc boinc     37140 Jun  4 00:46 runpilot2-wrapper.sh
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:45:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:06 run_atlas
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:06 job.xml
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc      6471 Jun  4 18:06 init_data.xml
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc 215872162 Jun  4 18:06 EVNT.45006593._001907.pool.root.1
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:06 start_atlas.sh
[2025-06-04 18:45:12] drwxrwx--x 2 boinc boinc        68 Jun  4 18:06 shared
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc    508879 Jun  4 18:06 input.tar.gz
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:06 boinc_lockfile
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc      2525 Jun  4 18:06 pandaJob.out
[2025-06-04 18:45:12] -rw------- 1 boinc boinc    990989 Jun  4 18:06 agis_schedconf.cvmfs.json
[2025-06-04 18:45:12] -rw------- 1 boinc boinc   1598969 Jun  4 18:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:45:12] drwx------ 4 boinc boinc      4096 Jun  4 18:06 pilot3
[2025-06-04 18:45:12] -rw------- 1 boinc boinc        95 Jun  4 18:44 pilot_heartbeat.json
[2025-06-04 18:45:12] -rw------- 1 boinc boinc 177366312 Jun  4 18:44 HITS.45006595._047515.pool.root.1
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:44 boinc_task_state.xml
[2025-06-04 18:45:12] -rw------- 1 boinc boinc      1017 Jun  4 18:44 memory_monitor_summary.json
[2025-06-04 18:45:12] -rw------- 1 boinc boinc    331677 Jun  4 18:44 log.45006595._047515.job.log.tgz.1
[2025-06-04 18:45:12] -rw------- 1 boinc boinc      7688 Jun  4 18:44 heartbeat.json
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:45 boinc_mmap_file
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:45 wrapper_checkpoint.txt
[2025-06-04 18:45:12] -rw------- 1 boinc boinc      4354 Jun  4 18:45 pilotlog.txt
[2025-06-04 18:45:12] -rw------- 1 boinc boinc    247349 Jun  4 18:45 log.45006595._047515.job.log.1
[2025-06-04 18:45:12] -rw------- 1 boinc boinc       357 Jun  4 18:45 output.list
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:45 runtime_log
[2025-06-04 18:45:12] -rw------- 1 boinc boinc    593920 Jun  4 18:45 result.tar.gz
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc      8683 Jun  4 18:45 runtime_log.err
[2025-06-04 18:45:12] -rw------- 1 boinc boinc       653 Jun  4 18:45 jFELDmMapg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFRmKDm0utkvm.diag
[2025-06-04 18:45:12] -rw-r--r-- 1 boinc boinc     21504 Jun  4 18:45 stderr.txt
[2025-06-04 18:45:12] HITS file was successfully produced:
[2025-06-04 18:45:12] -rw------- 1 boinc boinc 177366312 Jun  4 18:44 shared/HITS.pool.root.1
[2025-06-04 18:45:12]  *** Contents of shared directory: ***
[2025-06-04 18:45:12] total 385124
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc 215872162 Jun  4 18:06 ATLAS.root_0
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:06 start_atlas.sh
[2025-06-04 18:45:12] -rw-r--r-- 2 boinc boinc    508879 Jun  4 18:06 input.tar.gz
[2025-06-04 18:45:12] -rw------- 1 boinc boinc 177366312 Jun  4 18:44 HITS.pool.root.1
[2025-06-04 18:45:12] -rw------- 1 boinc boinc    593920 Jun  4 18:45 result.tar.gz
18:45:13 (470441): run_atlas exited; CPU time 24240.716404
18:45:13 (470441): called boinc_finish(0)

</stderr_txt>
]]>

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