Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:37:30 (3878860): wrapper (7.7.26015): starting
14:37:30 (3878860): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 14:37:30] Arguments: --nthreads 4
[2025-06-05 14:37:30] Threads: 4
[2025-06-05 14:37:30] Checking for CVMFS
[2025-06-05 14:37:30] No cvmfs_config command found, will try listing directly
[2025-06-05 14:37:30] CVMFS is ok
[2025-06-05 14:37:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:37:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:37:30] Further information can be found at the LHC@home message board.
[2025-06-05 14:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:37:30] Checking for apptainer binary...
[2025-06-05 14:37:30] which: no apptainer in ((null))
[2025-06-05 14:37:30] apptainer is not installed, using version from CVMFS
[2025-06-05 14:37:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:37:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-05 14:37:30] apptainer works
[2025-06-05 14:37:30] Set ATHENA_PROC_NUMBER=4
[2025-06-05 14:37:30] Set ATHENA_CORE_NUMBER=4
[2025-06-05 14:37:30] Starting ATLAS job with PandaID=6678152440
[2025-06-05 14:37:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:31:10]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:31:10] 2025-06-05 15:30:45,955 | INFO     | executing command: lscpu
[2025-06-05 17:31:10] 2025-06-05 15:30:45,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:31:10] 2025-06-05 15:30:47,807 | INFO     | monitor loop #773: job 0:6678152440 is in state 'finished'
[2025-06-05 17:31:10] 2025-06-05 15:30:47,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:31:10] 2025-06-05 15:30:50,310 | INFO     | monitor loop #774: job 0:6678152440 is in state 'finished'
[2025-06-05 17:31:10] 2025-06-05 15:30:50,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 17:31:10] 2025-06-05 15:30:51,185 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678152440/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,186 | INFO     | extracted standard info from prmon json
[2025-06-05 17:31:10] 2025-06-05 15:30:51,186 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:31:10] 2025-06-05 15:30:51,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:31:10] 2025-06-05 15:30:51,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:31:10] 2025-06-05 15:30:51,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:31:10] 2025-06-05 15:30:51,191 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:31:10] 2025-06-05 15:30:51,191 | INFO     | sum of square deviations: 1523386702.5
[2025-06-05 17:31:10] 2025-06-05 15:30:51,192 | INFO     | sum of deviations: 7205069381.499996
[2025-06-05 17:31:10] 2025-06-05 15:30:51,192 | INFO     | mean x: 1749132238.5
[2025-06-05 17:31:10] 2025-06-05 15:30:51,192 | INFO     | mean y: 2341542.2647058824
[2025-06-05 17:31:10] 2025-06-05 15:30:51,192 | INFO     | -- intersect: -8270422763.166732
[2025-06-05 17:31:10] 2025-06-05 15:30:51,193 | INFO     | intersect: -8270422763.166732
[2025-06-05 17:31:10] 2025-06-05 15:30:51,193 | INFO     | chi2: 1.7711798211493301
[2025-06-05 17:31:10] 2025-06-05 15:30:51,193 | INFO     | sum of square deviations: 1392881930.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,194 | INFO     | sum of deviations: 7288792094.999999
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | mean x: 1749132086.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | mean y: 2341640.084848485
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | -- intersect: -9150666843.23122
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | intersect: -9150666843.23122
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | chi2: 1.7728349824724228
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | current chi2=1.7728349824724228 (change=-0.09344964883455928 %)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,195 | INFO     | right removable region: 164
[2025-06-05 17:31:10] 2025-06-05 15:30:51,196 | INFO     | sum of square deviations: 1392881930.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,197 | INFO     | sum of deviations: -20679076433.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,197 | INFO     | mean x: 1749132391.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,197 | INFO     | mean y: 2373763.0424242425
[2025-06-05 17:31:10] 2025-06-05 15:30:51,197 | INFO     | -- intersect: 25970434390.352768
[2025-06-05 17:31:10] 2025-06-05 15:30:51,197 | INFO     | intersect: 25970434390.352768
[2025-06-05 17:31:10] 2025-06-05 15:30:51,198 | INFO     | chi2: 0.09185561233554539
[2025-06-05 17:31:10] 2025-06-05 15:30:51,198 | INFO     | current chi2=0.09185561233554539 (change=94.81387427528732 %)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,198 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,199 | INFO     | sum of deviations: -18611470513.999996
[2025-06-05 17:31:10] 2025-06-05 15:30:51,199 | INFO     | mean x: 1749132543.5
[2025-06-05 17:31:10] 2025-06-05 15:30:51,199 | INFO     | mean y: 2371172.775
[2025-06-05 17:31:10] 2025-06-05 15:30:51,199 | INFO     | -- intersect: 25634342096.31193
[2025-06-05 17:31:10] 2025-06-05 15:30:51,200 | INFO     | intersect: 25634342096.31193
[2025-06-05 17:31:10] 2025-06-05 15:30:51,200 | INFO     | chi2: 0.08928966325313976
[2025-06-05 17:31:10] 2025-06-05 15:30:51,200 | INFO     | current chi2=0.08928966325313976 (change=2.7934592314645927 %)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,200 | INFO     | left removable region: 20
[2025-06-05 17:31:10] 2025-06-05 15:30:51,200 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,201 | INFO     | sum of deviations: -10989176779.0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,201 | INFO     | mean x: 1749132665.5
[2025-06-05 17:31:10] 2025-06-05 15:30:51,201 | INFO     | mean y: 2362574.1944444445
[2025-06-05 17:31:10] 2025-06-05 15:30:51,202 | INFO     | -- intersect: 20763108544.95118
[2025-06-05 17:31:10] 2025-06-05 15:30:51,202 | INFO     | intersect: 20763108544.95118
[2025-06-05 17:31:10] 2025-06-05 15:30:51,202 | INFO     | chi2: 0.07597380027756377
[2025-06-05 17:31:10] 2025-06-05 15:30:51,202 | INFO     | -- intersect: 20763108544.95118
[2025-06-05 17:31:10] 2025-06-05 15:30:51,202 | INFO     | current memory leak: -11.87 B/s (using 144 data points, chi2=0.08)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | ..............................
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | . Timing measurements:
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | . get job = 0 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | . initial setup = 1 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | . payload setup = 6 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,203 | INFO     | . stage-in = 0 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,204 | INFO     | . payload execution = 10357 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,204 | INFO     | . stage-out = 0 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,204 | INFO     | . log creation = 0 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,204 | INFO     | ..............................
[2025-06-05 17:31:10] 2025-06-05 15:30:51,314 | INFO     | 
[2025-06-05 17:31:10] 2025-06-05 15:30:51,314 | INFO     | job summary report
[2025-06-05 17:31:10] 2025-06-05 15:30:51,314 | INFO     | --------------------------------------------------
[2025-06-05 17:31:10] 2025-06-05 15:30:51,314 | INFO     | PanDA job id: 6678152440
[2025-06-05 17:31:10] 2025-06-05 15:30:51,314 | INFO     | task id: 45006595
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | errors: (none)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | pilot state: finished 
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | transexitcode: 0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | exeerrorcode: 0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | exeerrordiag: 
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | exitcode: 0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | exitmsg: OK
[2025-06-05 17:31:10] 2025-06-05 15:30:51,315 | INFO     | cpuconsumptiontime: 39774 s
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | nevents: 400
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | neventsw: 0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | pid: 3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | pgrp: 3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | corecount: 4
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | event service: False
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | sizes: {0: 2397239, 1: 2397381, 4: 2397587, 11: 2397615, 10367: 2426217, 10368: 2435180, 10369: 2435364, 10377: 2435534}
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | --------------------------------------------------
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | 
[2025-06-05 17:31:10] 2025-06-05 15:30:51,316 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-06-05 17:31:10] 2025-06-05 15:30:51,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:31:10] 2025-06-05 15:30:51,337 | INFO     | job 6678152440 has completed (purged errors)
[2025-06-05 17:31:10] 2025-06-05 15:30:51,338 | INFO     | overall cleanup function is called
[2025-06-05 17:31:10] 2025-06-05 15:30:52,345 | INFO     | --- collectZombieJob: --- 10, [3889496]
[2025-06-05 17:31:10] 2025-06-05 15:30:52,345 | INFO     | zombie collector waiting for pid 3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:52,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:31:10] 2025-06-05 15:30:52,346 | INFO     | collected zombie processes
[2025-06-05 17:31:10] 2025-06-05 15:30:52,346 | INFO     | will attempt to kill all subprocesses of pid=3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:52,565 | INFO     | process IDs to be killed: [3889496] (in reverse order)
[2025-06-05 17:31:10] 2025-06-05 15:30:52,630 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:31:10] 2025-06-05 15:30:52,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:31:10] 2025-06-05 15:30:52,637 | INFO     | did not find any defunct processes belonging to 3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:52,643 | INFO     | did not find any defunct processes belonging to 3889496
[2025-06-05 17:31:10] 2025-06-05 15:30:52,643 | INFO     | ready for new job
[2025-06-05 17:31:10] 2025-06-05 15:30:52,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:31:10] 2025-06-05 15:30:52,645 | INFO     | **************************************
[2025-06-05 17:31:10] 2025-06-05 15:30:52,646 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:31:10] 2025-06-05 15:30:52,646 | INFO     | **************************************
[2025-06-05 17:31:10] 2025-06-05 15:30:52,646 | INFO     | 
[2025-06-05 17:31:10] 2025-06-05 15:30:52,648 | INFO     | architecture information:
[2025-06-05 17:31:10] 2025-06-05 15:30:52,648 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:31:10] 2025-06-05 15:30:52,661 | INFO     | cat /etc/os-release:
[2025-06-05 17:31:10] NAME="CentOS Linux"
[2025-06-05 17:31:10] VERSION="7 (Core)"
[2025-06-05 17:31:10] ID="centos"
[2025-06-05 17:31:10] ID_LIKE="rhel fedora"
[2025-06-05 17:31:10] VERSION_ID="7"
[2025-06-05 17:31:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:31:10] ANSI_COLOR="0;31"
[2025-06-05 17:31:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:31:10] HOME_URL="https://www.centos.org/"
[2025-06-05 17:31:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:31:10] 
[2025-06-05 17:31:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:31:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:31:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:31:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:31:10] 
[2025-06-05 17:31:10] 2025-06-05 15:30:52,661 | INFO     | **************************************
[2025-06-05 17:31:10] 2025-06-05 15:30:53,163 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-06-05 17:31:10] 2025-06-05 15:30:53,177 | INFO     | sufficient remaining disk space (3464981643264 B)
[2025-06-05 17:31:10] 2025-06-05 15:30:53,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:31:10] 2025-06-05 15:30:53,178 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:31:10] 2025-06-05 15:30:53,178 | INFO     | update_server=False
[2025-06-05 17:31:10] 2025-06-05 15:30:53,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:31:10] 2025-06-05 15:30:53,178 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:31:10] 2025-06-05 15:30:53,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:31:10] 2025-06-05 15:30:53,179 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:31:10] 2025-06-05 15:30:53,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:31:10] 2025-06-05 15:30:53,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:31:10] 2025-06-05 15:30:53,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:31:10] 2025-06-05 15:30:53,400 | INFO     | all job control threads have been joined
[2025-06-05 17:31:10] 2025-06-05 15:30:53,565 | INFO     | all data control threads have been joined
[2025-06-05 17:31:10] 2025-06-05 15:30:53,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:31:10] 2025-06-05 15:30:53,816 | INFO     | aborting loop
[2025-06-05 17:31:10] 2025-06-05 15:30:54,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:31:10] 2025-06-05 15:30:54,183 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,184 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,188 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,246 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,311 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,406 | INFO     | [job] control thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,570 | INFO     | [data] control thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:54,577 | INFO     | all payload control threads have been joined
[2025-06-05 17:31:10] 2025-06-05 15:30:54,822 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,138 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,184 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,221 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,403 | INFO     | [job] validate thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,583 | INFO     | [payload] control thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:55,623 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:30:58,094 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:31:03,320 | INFO     | job.realtimelogging is not enabled
[2025-06-05 17:31:10] 2025-06-05 15:31:04,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:31:10] 2025-06-05 15:31:04,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23062941239104)>', '<ExcThread(monitor, started 23062221141760)>']
[2025-06-05 17:31:10] 2025-06-05 15:31:05,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:31:10] 2025-06-05 15:31:05,233 | INFO     | [monitor] control thread has ended
[2025-06-05 17:31:10] 2025-06-05 15:31:09,630 | INFO     | all workflow threads have been joined
[2025-06-05 17:31:10] 2025-06-05 15:31:09,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:31:10] 2025-06-05 15:31:09,631 | INFO     | traces error code: 0
[2025-06-05 17:31:10] 2025-06-05 15:31:09,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:31:10] 2025-06-05 15:31:09,744 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:31:10] 2025-06-05 15:31:09,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:31:10] 2025-06-05 15:31:09,748 [wrapper] pilotpid: 3882417
[2025-06-05 17:31:10] 2025-06-05 15:31:09,750 [wrapper] Pilot exit status: 0
[2025-06-05 17:31:10] 2025-06-05 15:31:09,759 [wrapper] pandaids: 6678152440
[2025-06-05 17:31:10] 2025-06-05 15:31:09,799 [wrapper] cleanup supervisor_pilot 4064444 3882418
[2025-06-05 17:31:10] 2025-06-05 15:31:09,801 [wrapper] Test setup, not cleaning
[2025-06-05 17:31:10] 2025-06-05 15:31:09,804 [wrapper] apfmon messages muted
[2025-06-05 17:31:10] 2025-06-05 15:31:09,806 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:31:10] 2025-06-05 15:31:09,808 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:31:10]  *** Error codes and diagnostics ***
[2025-06-05 17:31:10]     "exeErrorCode": 0,
[2025-06-05 17:31:10]     "exeErrorDiag": "",
[2025-06-05 17:31:10]     "pilotErrorCode": 0,
[2025-06-05 17:31:10]     "pilotErrorDiag": "",
[2025-06-05 17:31:10]  *** Listing of results directory ***
[2025-06-05 17:31:10] total 384444
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:36 queuedata.json
[2025-06-05 17:31:10] -rwx------ 1 boinc boinc     37140 Jun  4 00:37 runpilot2-wrapper.sh
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc       100 Jun  5 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:31:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 14:37 run_atlas
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc       105 Jun  5 14:37 job.xml
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc 213501630 Jun  5 14:37 EVNT.45006593._001893.pool.root.1
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc      6419 Jun  5 14:37 init_data.xml
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:37 start_atlas.sh
[2025-06-05 17:31:10] drwxrwx--x 2 boinc boinc      4096 Jun  5 14:37 shared
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc    508881 Jun  5 14:37 input.tar.gz
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc         0 Jun  5 14:37 boinc_lockfile
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc      2525 Jun  5 14:37 pandaJob.out
[2025-06-05 17:31:10] -rw------- 1 boinc boinc    983210 Jun  5 14:37 agis_schedconf.cvmfs.json
[2025-06-05 17:31:10] -rw------- 1 boinc boinc   1598969 Jun  5 14:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:31:10] drwx------ 4 boinc boinc      4096 Jun  5 14:37 pilot3
[2025-06-05 17:31:10] -rw------- 1 boinc boinc 173774012 Jun  5 17:30 HITS.45006595._047217.pool.root.1
[2025-06-05 17:31:10] -rw------- 1 boinc boinc        95 Jun  5 17:30 pilot_heartbeat.json
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc       528 Jun  5 17:30 boinc_task_state.xml
[2025-06-05 17:31:10] -rw------- 1 boinc boinc      1035 Jun  5 17:30 memory_monitor_summary.json
[2025-06-05 17:31:10] -rw------- 1 boinc boinc    294329 Jun  5 17:30 log.45006595._047217.job.log.tgz.1
[2025-06-05 17:31:10] -rw------- 1 boinc boinc      7725 Jun  5 17:30 heartbeat.json
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc        26 Jun  5 17:31 wrapper_checkpoint.txt
[2025-06-05 17:31:10] -rw------- 1 boinc boinc      4559 Jun  5 17:31 pilotlog.txt
[2025-06-05 17:31:10] -rw------- 1 boinc boinc    990195 Jun  5 17:31 log.45006595._047217.job.log.1
[2025-06-05 17:31:10] -rw------- 1 boinc boinc       357 Jun  5 17:31 output.list
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc       620 Jun  5 17:31 runtime_log
[2025-06-05 17:31:10] -rw------- 1 boinc boinc   1300480 Jun  5 17:31 result.tar.gz
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc      9021 Jun  5 17:31 runtime_log.err
[2025-06-05 17:31:10] -rw------- 1 boinc boinc       663 Jun  5 17:31 UKiKDm0Qpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhOmKDmxdQW6m.diag
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc      8192 Jun  5 17:31 boinc_mmap_file
[2025-06-05 17:31:10] -rw-r--r-- 1 boinc boinc     20919 Jun  5 17:31 stderr.txt
[2025-06-05 17:31:10] HITS file was successfully produced:
[2025-06-05 17:31:10] -rw------- 1 boinc boinc 173774012 Jun  5 17:30 shared/HITS.pool.root.1
[2025-06-05 17:31:10]  *** Contents of shared directory: ***
[2025-06-05 17:31:10] total 379996
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc 213501630 Jun  5 14:37 ATLAS.root_0
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:37 start_atlas.sh
[2025-06-05 17:31:10] -rw-r--r-- 2 boinc boinc    508881 Jun  5 14:37 input.tar.gz
[2025-06-05 17:31:10] -rw------- 1 boinc boinc 173774012 Jun  5 17:30 HITS.pool.root.1
[2025-06-05 17:31:10] -rw------- 1 boinc boinc   1300480 Jun  5 17:31 result.tar.gz
17:31:12 (3878860): run_atlas exited; CPU time 40050.451083
17:31:12 (3878860): called boinc_finish(0)

</stderr_txt>
]]>

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