Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:36 (26630): wrapper (7.7.26015): starting
13:34:36 (26630): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:34:36] Arguments: --nthreads 8
[2025-06-04 13:34:36] Threads: 8
[2025-06-04 13:34:36] Checking for CVMFS
[2025-06-04 13:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:34:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:34:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:34:38] 2.11.2.0 14321 33169 93820 146778 0 93 17054654 25165824 4146 130560 0 17043568 99.825 17822129 1899 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 13:34:38] CVMFS is ok
[2025-06-04 13:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:34:38] Checking for apptainer binary...
[2025-06-04 13:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:34:38] Running /usr/bin/apptainer --version
[2025-06-04 13:34:38] apptainer version 1.3.2-1.el7
[2025-06-04 13:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:34:44] cg-vwn391.simple-grid.lan
[2025-06-04 13:34:44] apptainer works
[2025-06-04 13:34:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:34:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:34:44] Starting ATLAS job with PandaID=6678154272
[2025-06-04 13:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:40:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:40:10] 2025-06-04 15:35:33,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:40:10] 2025-06-04 15:35:33,922 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:40:10] 2025-06-04 15:35:33,922 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:40:10] 2025-06-04 15:35:33,927 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:40:10] 2025-06-04 15:35:33,928 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,930 | INFO     | sum of deviations: 71379122183.99998
[2025-06-04 17:40:10] 2025-06-04 15:35:33,930 | INFO     | mean x: 1749044385.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,930 | INFO     | mean y: 2430984.617777778
[2025-06-04 17:40:10] 2025-06-04 15:35:33,930 | INFO     | -- intersect: -35344737805.38157
[2025-06-04 17:40:10] 2025-06-04 15:35:33,930 | INFO     | intersect: -35344737805.38157
[2025-06-04 17:40:10] 2025-06-04 15:35:33,931 | INFO     | chi2: 6.246675603900192
[2025-06-04 17:40:10] 2025-06-04 15:35:33,931 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,933 | INFO     | sum of deviations: 84430313500.00006
[2025-06-04 17:40:10] 2025-06-04 15:35:33,933 | INFO     | mean x: 1749044232.5
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | mean y: 2439451.1454545455
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | -- intersect: -44723729630.84311
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | intersect: -44723729630.84311
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | chi2: 5.533863438767549
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | current chi2=5.533863438767549 (change=11.411064225707346 %)
[2025-06-04 17:40:10] 2025-06-04 15:35:33,934 | INFO     | right removable region: 219
[2025-06-04 17:40:10] 2025-06-04 15:35:33,935 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,936 | INFO     | sum of deviations: -3987933224.4999905
[2025-06-04 17:40:10] 2025-06-04 15:35:33,937 | INFO     | mean x: 1749044537.5
[2025-06-04 17:40:10] 2025-06-04 15:35:33,937 | INFO     | mean y: 2480839.85
[2025-06-04 17:40:10] 2025-06-04 15:35:33,937 | INFO     | -- intersect: 2115051543.381981
[2025-06-04 17:40:10] 2025-06-04 15:35:33,937 | INFO     | intersect: 2115051543.381981
[2025-06-04 17:40:10] 2025-06-04 15:35:33,937 | INFO     | chi2: 1.7282319217756954
[2025-06-04 17:40:10] 2025-06-04 15:35:33,938 | INFO     | current chi2=1.7282319217756954 (change=72.33357338587182 %)
[2025-06-04 17:40:10] 2025-06-04 15:35:33,938 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | sum of deviations: -30860073240.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | mean x: 1749044690.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | mean y: 2499307.302325581
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | -- intersect: 17517632747.40582
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | intersect: 17517632747.40582
[2025-06-04 17:40:10] 2025-06-04 15:35:33,940 | INFO     | chi2: 0.9224091666371793
[2025-06-04 17:40:10] 2025-06-04 15:35:33,941 | INFO     | current chi2=0.9224091666371793 (change=46.6270032965577 %)
[2025-06-04 17:40:10] 2025-06-04 15:35:33,941 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 17:40:10] 2025-06-04 15:35:33,943 | INFO     | sum of deviations: -28711802842.5
[2025-06-04 17:40:10] 2025-06-04 15:35:33,943 | INFO     | mean x: 1749044842.5
[2025-06-04 17:40:10] 2025-06-04 15:35:33,943 | INFO     | mean y: 2497709.538095238
[2025-06-04 17:40:10] 2025-06-04 15:35:33,943 | INFO     | -- intersect: 17490288423.729626
[2025-06-04 17:40:10] 2025-06-04 15:35:33,943 | INFO     | intersect: 17490288423.729626
[2025-06-04 17:40:10] 2025-06-04 15:35:33,944 | INFO     | chi2: 0.9099051263498387
[2025-06-04 17:40:10] 2025-06-04 15:35:33,944 | INFO     | current chi2=0.9099051263498387 (change=1.3555849984586057 %)
[2025-06-04 17:40:10] 2025-06-04 15:35:33,944 | INFO     | left removable region: 30
[2025-06-04 17:40:10] 2025-06-04 15:35:33,944 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,946 | INFO     | sum of deviations: 6017189144.999999
[2025-06-04 17:40:10] 2025-06-04 15:35:33,946 | INFO     | mean x: 1749045117.0
[2025-06-04 17:40:10] 2025-06-04 15:35:33,946 | INFO     | mean y: 2491247.8306878307
[2025-06-04 17:40:10] 2025-06-04 15:35:33,946 | INFO     | -- intersect: -5024903618.715723
[2025-06-04 17:40:10] 2025-06-04 15:35:33,946 | INFO     | intersect: -5024903618.715723
[2025-06-04 17:40:10] 2025-06-04 15:35:33,947 | INFO     | chi2: 0.0012559311384325205
[2025-06-04 17:40:10] 2025-06-04 15:35:33,947 | INFO     | -- intersect: -5024903618.715723
[2025-06-04 17:40:10] 2025-06-04 15:35:33,947 | INFO     | current memory leak: 2.87 B/s (using 189 data points, chi2=0.00)
[2025-06-04 17:40:10] 2025-06-04 15:35:33,948 | INFO     | ..............................
[2025-06-04 17:40:10] 2025-06-04 15:35:33,948 | INFO     | . Timing measurements:
[2025-06-04 17:40:10] 2025-06-04 15:35:33,948 | INFO     | . get job = 0 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,948 | INFO     | . initial setup = 4 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | . payload setup = 146 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | . stage-in = 0 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | . payload execution = 13836 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | . stage-out = 3 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | . log creation = 1 s
[2025-06-04 17:40:10] 2025-06-04 15:35:33,949 | INFO     | ..............................
[2025-06-04 17:40:10] 2025-06-04 15:35:34,076 | INFO     | 
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | job summary report
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | --------------------------------------------------
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | PanDA job id: 6678154272
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | task id: 45006595
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | errors: (none)
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:40:10] 2025-06-04 15:35:34,077 | INFO     | pilot state: finished 
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | transexitcode: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | exeerrorcode: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | exeerrordiag: 
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | exitcode: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | exitmsg: OK
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | cpuconsumptiontime: 49987 s
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | nevents: 400
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | neventsw: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | pid: 13804
[2025-06-04 17:40:10] 2025-06-04 15:35:34,078 | INFO     | pgrp: 13804
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | corecount: 8
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | event service: False
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | sizes: {0: 2397116, 1: 2397371, 12: 2397371, 23: 2397399, 34: 2397427, 44: 2397455, 55: 2397611, 66: 2397639, 77: 2397929, 87: 2397929, 13987: 2427829, 13991: 2436
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | --------------------------------------------------
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | 
[2025-06-04 17:40:10] 2025-06-04 15:35:34,079 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-04 17:40:10] 2025-06-04 15:35:34,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:40:10] 2025-06-04 15:35:34,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,463 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:40:10] 2025-06-04 15:35:34,463 | INFO     | job 6678154272 has completed (purged errors)
[2025-06-04 17:40:10] 2025-06-04 15:35:34,463 | INFO     | overall cleanup function is called
[2025-06-04 17:40:10] 2025-06-04 15:35:35,472 | INFO     | --- collectZombieJob: --- 10, [13804]
[2025-06-04 17:40:10] 2025-06-04 15:35:35,472 | INFO     | zombie collector waiting for pid 13804
[2025-06-04 17:40:10] 2025-06-04 15:35:35,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:40:10] 2025-06-04 15:35:35,472 | INFO     | collected zombie processes
[2025-06-04 17:40:10] 2025-06-04 15:35:35,472 | INFO     | will attempt to kill all subprocesses of pid=13804
[2025-06-04 17:40:10] 2025-06-04 15:35:35,607 | INFO     | process IDs to be killed: [13804] (in reverse order)
[2025-06-04 17:40:10] 2025-06-04 15:35:36,430 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:40:10] 2025-06-04 15:35:36,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:40:10] 2025-06-04 15:35:36,434 | INFO     | did not find any defunct processes belonging to 13804
[2025-06-04 17:40:10] 2025-06-04 15:35:36,445 | INFO     | did not find any defunct processes belonging to 13804
[2025-06-04 17:40:10] 2025-06-04 15:35:36,446 | INFO     | ready for new job
[2025-06-04 17:40:10] 2025-06-04 15:35:36,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:40:10] 2025-06-04 15:35:36,448 | INFO     | **************************************
[2025-06-04 17:40:10] 2025-06-04 15:35:36,448 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:40:10] 2025-06-04 15:35:36,448 | INFO     | **************************************
[2025-06-04 17:40:10] 2025-06-04 15:35:36,448 | INFO     | 
[2025-06-04 17:40:10] 2025-06-04 15:35:36,449 | INFO     | pilot is running in a VM
[2025-06-04 17:40:10] 2025-06-04 15:35:36,449 | INFO     | architecture information:
[2025-06-04 17:40:10] 2025-06-04 15:35:36,459 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:40:10] 2025-06-04 15:35:36,649 | INFO     | cat /etc/os-release:
[2025-06-04 17:40:10] NAME="CentOS Linux"
[2025-06-04 17:40:10] VERSION="7 (Core)"
[2025-06-04 17:40:10] ID="centos"
[2025-06-04 17:40:10] ID_LIKE="rhel fedora"
[2025-06-04 17:40:10] VERSION_ID="7"
[2025-06-04 17:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:40:10] ANSI_COLOR="0;31"
[2025-06-04 17:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:40:10] HOME_URL="https://www.centos.org/"
[2025-06-04 17:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:40:10] 
[2025-06-04 17:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:40:10] 
[2025-06-04 17:40:10] 2025-06-04 15:35:36,650 | INFO     | **************************************
[2025-06-04 17:40:10] 2025-06-04 15:35:37,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-04 17:40:10] 2025-06-04 15:35:37,326 | INFO     | sufficient remaining disk space (496211329024 B)
[2025-06-04 17:40:10] 2025-06-04 15:35:37,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:40:10] 2025-06-04 15:35:37,326 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:40:10] 2025-06-04 15:35:37,326 | INFO     | update_server=False
[2025-06-04 17:40:10] 2025-06-04 15:35:37,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:40:10] 2025-06-04 15:35:37,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:40:10] 2025-06-04 15:35:37,615 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 17:40:10] 2025-06-04 15:35:37,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 17:40:10] 2025-06-04 15:35:37,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:40:10] 2025-06-04 15:35:37,615 | INFO     | will abort loop
[2025-06-04 17:40:10] 2025-06-04 15:35:37,833 | INFO     | all data control threads have been joined
[2025-06-04 17:40:10] 2025-06-04 15:35:38,208 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:40:10] 2025-06-04 15:35:38,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:40:10] 2025-06-04 15:35:38,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:40:10] 2025-06-04 15:35:38,333 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:38,559 | INFO     | all payload control threads have been joined
[2025-06-04 17:40:10] 2025-06-04 15:35:38,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:40:10] 2025-06-04 15:35:38,620 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:38,782 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:38,839 | INFO     | [data] control thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:38,934 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:38,959 | INFO     | all job control threads have been joined
[2025-06-04 17:40:10] 2025-06-04 15:35:38,964 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,091 | INFO     | [job] validate thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:40:10] 2025-06-04 15:35:39,102 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,461 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,502 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,565 | INFO     | [payload] control thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:39,965 | INFO     | [job] control thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:40,103 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:42,592 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:48,243 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:40:10] 2025-06-04 15:35:49,249 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:40:10] 2025-06-04 15:35:49,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059262138176)>', '<ExcThread(monitor, started 140058598299392)>']
[2025-06-04 17:40:10] 2025-06-04 15:35:50,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:40:10] 2025-06-04 15:35:50,280 | INFO     | [monitor] control thread has ended
[2025-06-04 17:40:10] 2025-06-04 15:35:54,992 | INFO     | all workflow threads have been joined
[2025-06-04 17:40:10] 2025-06-04 15:35:54,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:40:10] 2025-06-04 15:35:54,992 | INFO     | traces error code: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:54,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:40:10] 2025-06-04 15:35:55,456 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:40:10] 2025-06-04 15:35:55,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:40:10] 2025-06-04 15:35:55,665 [wrapper] pilotpid: 31573
[2025-06-04 17:40:10] 2025-06-04 15:35:55,746 [wrapper] Pilot exit status: 0
[2025-06-04 17:40:10] 2025-06-04 15:35:55,977 [wrapper] pandaids: 6678154272
[2025-06-04 17:40:10] 2025-06-04 15:35:56,317 [wrapper] cleanup supervisor_pilot 21057 31574
[2025-06-04 17:40:10] 2025-06-04 15:35:56,352 [wrapper] Test setup, not cleaning
[2025-06-04 17:40:10] 2025-06-04 15:35:56,385 [wrapper] apfmon messages muted
[2025-06-04 17:40:10] 2025-06-04 15:35:56,420 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:40:10] 2025-06-04 15:35:56,456 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:40:10]  *** Error codes and diagnostics ***
[2025-06-04 17:40:10]     "exeErrorCode": 0,
[2025-06-04 17:40:10]     "exeErrorDiag": "",
[2025-06-04 17:40:10]     "pilotErrorCode": 0,
[2025-06-04 17:40:10]     "pilotErrorDiag": "",
[2025-06-04 17:40:10]  *** Listing of results directory ***
[2025-06-04 17:40:10] total 385184
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:42 pilot3.tar.gz
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:49 queuedata.json
[2025-06-04 17:40:10] -rwx------. 1 boinc boinc     37140 Jun  4 00:49 runpilot2-wrapper.sh
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:40:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:34 run_atlas
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:34 job.xml
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc      6393 Jun  4 13:34 init_data.xml
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc 214098287 Jun  4 13:34 EVNT.45006593._001910.pool.root.1
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:34 start_atlas.sh
[2025-06-04 17:40:10] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:34 shared
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc    508885 Jun  4 13:34 input.tar.gz
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:34 boinc_lockfile
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc      2525 Jun  4 13:34 pandaJob.out
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc    986812 Jun  4 13:37 agis_schedconf.cvmfs.json
[2025-06-04 17:40:10] drwx------. 4 boinc boinc      4096 Jun  4 13:37 pilot3
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc 173319935 Jun  4 17:32 HITS.45006595._047592.pool.root.1
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc       531 Jun  4 17:32 boinc_task_state.xml
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc      1014 Jun  4 17:33 memory_monitor_summary.json
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc   1598969 Jun  4 17:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc    380550 Jun  4 17:34 log.45006595._047592.job.log.tgz.1
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc        95 Jun  4 17:35 pilot_heartbeat.json
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc      7687 Jun  4 17:35 heartbeat.json
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc      4675 Jun  4 17:35 pilotlog.txt
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc   1215280 Jun  4 17:35 log.45006595._047592.job.log.1
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc       357 Jun  4 17:35 output.list
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:35 runtime_log
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc   1617920 Jun  4 17:35 result.tar.gz
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc       657 Jun  4 17:35 xHPMDm2cpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbSmKDmX92RLn.diag
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc      8673 Jun  4 17:35 runtime_log.err
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:40 boinc_mmap_file
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc        28 Jun  4 17:40 wrapper_checkpoint.txt
[2025-06-04 17:40:10] -rw-r--r--. 1 boinc boinc     20478 Jun  4 17:40 stderr.txt
[2025-06-04 17:40:10] HITS file was successfully produced:
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc 173319935 Jun  4 17:32 shared/HITS.pool.root.1
[2025-06-04 17:40:10]  *** Contents of shared directory: ***
[2025-06-04 17:40:10] total 380440
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc 214098287 Jun  4 13:34 ATLAS.root_0
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:34 start_atlas.sh
[2025-06-04 17:40:10] -rw-r--r--. 2 boinc boinc    508885 Jun  4 13:34 input.tar.gz
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc 173319935 Jun  4 17:32 HITS.pool.root.1
[2025-06-04 17:40:10] -rw-------. 1 boinc boinc   1617920 Jun  4 17:35 result.tar.gz
17:40:12 (26630): run_atlas exited; CPU time 50189.699009
17:40:12 (26630): called boinc_finish(0)

</stderr_txt>
]]>

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