Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:02 (9452): wrapper (7.7.26015): starting
23:30:02 (9452): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:30:02] Arguments: --nthreads 8
[2025-06-03 23:30:02] Threads: 8
[2025-06-03 23:30:02] Checking for CVMFS
[2025-06-03 23:30:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:30:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:30:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:30:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:30:03] 2.11.2.0 73730 10447 318236 146767 3 202 18332490 18432000 17463 130560 0 85252630 99.393 110212194 72404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:30:03] CVMFS is ok
[2025-06-03 23:30:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:30:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:30:03] Further information can be found at the LHC@home message board.
[2025-06-03 23:30:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:30:03] Checking for apptainer binary...
[2025-06-03 23:30:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:30:03] Running /usr/bin/apptainer --version
[2025-06-03 23:30:03] apptainer version 1.3.2-1.el7
[2025-06-03 23:30:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:30:04] c-212-10.aglt2.org
[2025-06-03 23:30:04] apptainer works
[2025-06-03 23:30:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:30:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:30:04] Starting ATLAS job with PandaID=6678152419
[2025-06-03 23:30:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:30:42 (28714): wrapper (7.7.26015): starting
00:30:42 (28714): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:30:43] Arguments: --nthreads 8
[2025-06-04 00:30:43] Threads: 8
[2025-06-04 00:30:43] This job has been restarted, cleaning up previous attempt
[2025-06-04 00:30:43] Checking for CVMFS
[2025-06-04 00:30:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:30:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:30:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:30:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:30:43] 2.11.2.0 73730 10507 315724 146768 2 186 10448383 18432000 11776 130560 0 85642069 99.393 110601029 72380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:30:43] CVMFS is ok
[2025-06-04 00:30:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:30:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:30:43] Further information can be found at the LHC@home message board.
[2025-06-04 00:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:30:43] Checking for apptainer binary...
[2025-06-04 00:30:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:30:43] Running /usr/bin/apptainer --version
[2025-06-04 00:30:43] apptainer version 1.3.2-1.el7
[2025-06-04 00:30:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:30:44] c-212-10.aglt2.org
[2025-06-04 00:30:44] apptainer works
[2025-06-04 00:30:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:30:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:30:44] Starting ATLAS job with PandaID=6678152419
[2025-06-04 00:30:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:12:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:12:46] 2025-06-04 06:12:25,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:12:46] 2025-06-04 06:12:25,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:12:46] 2025-06-04 06:12:25,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:12:46] 2025-06-04 06:12:25,745 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:12:46] 2025-06-04 06:12:25,745 | INFO     | sum of square deviations: 310048606.91
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | sum of deviations: 3365036075.310005
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | mean x: 1749014499.53
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | mean y: 2432053.73
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | -- intersect: -18980065386.96048
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | intersect: -18980065386.96048
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | chi2: 2.0023703809753752
[2025-06-04 02:12:46] 2025-06-04 06:12:25,746 | INFO     | sum of square deviations: 265825436.90526336
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | sum of deviations: 9784824003.71579
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | mean x: 1749014347.031579
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | mean y: 2453250.094736842
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | -- intersect: -64377380993.44691
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | intersect: -64377380993.44691
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | chi2: 1.1687304440317898
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | current chi2=1.1687304440317898 (change=41.63265422141886 %)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,747 | INFO     | sum of square deviations: 226020954.39999995
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | sum of deviations: 9323334632.266668
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | mean x: 1749014194.5333333
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | mean y: 2451481.7444444443
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | -- intersect: -72144153931.48631
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | intersect: -72144153931.48631
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | chi2: 1.170863270920631
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | current chi2=1.170863270920631 (change=-0.18249091565404502 %)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | right removable region: 89
[2025-06-04 02:12:46] 2025-06-04 06:12:25,748 | INFO     | sum of square deviations: 265823606.90526336
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | sum of deviations: -7564395772.463158
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | mean x: 1749014652.031579
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | mean y: 2468600.8210526314
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | -- intersect: 49773213922.61977
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | intersect: 49773213922.61977
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | chi2: 0.8720731198252029
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | current chi2=0.8720731198252029 (change=56.44796147052439 %)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | sum of square deviations: 226017294.39999995
[2025-06-04 02:12:46] 2025-06-04 06:12:25,749 | INFO     | sum of deviations: -7485668084.400001
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | mean x: 1749014804.5333333
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | mean y: 2468278.8
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | -- intersect: 57929647418.761795
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | intersect: 57929647418.761795
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | chi2: 0.8725728174050662
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | current chi2=0.8725728174050662 (change=-0.057299963558503426 %)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | left removable region: 20
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | sum of square deviations: 101838404.86956538
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | sum of deviations: -916215365.6521738
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | mean x: 1749014774.0434783
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | mean y: 2493935.217391304
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | -- intersect: 15737954568.008608
[2025-06-04 02:12:46] 2025-06-04 06:12:25,750 | INFO     | intersect: 15737954568.008608
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | chi2: 0.0010963634249084228
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | -- intersect: 15737954568.008608
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | current memory leak: -9.00 B/s (using 69 data points, chi2=0.00)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | ..............................
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . Timing measurements:
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . get job = 0 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . initial setup = 0 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . payload setup = 6 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . stage-in = 0 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . payload execution = 6052 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . stage-out = 0 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | . log creation = 0 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,751 | INFO     | ..............................
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | 
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | job summary report
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | --------------------------------------------------
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | PanDA job id: 6678152419
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | task id: 45006595
[2025-06-04 02:12:46] 2025-06-04 06:12:25,824 | INFO     | errors: (none)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | pilot state: finished 
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | transexitcode: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | exeerrorcode: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | exeerrordiag: 
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | exitcode: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | exitmsg: OK
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | cpuconsumptiontime: 30608 s
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | nevents: 400
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | neventsw: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | pid: 91473
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | pgrp: 91473
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | corecount: 8
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | event service: False
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | sizes: {0: 2404305, 1: 2405161, 4: 2405367, 11: 2405395, 6062: 2431953, 6063: 2431952, 6064: 2441077, 6065: 2441133, 6079: 2441303}
[2025-06-04 02:12:46] 2025-06-04 06:12:25,825 | INFO     | --------------------------------------------------
[2025-06-04 02:12:46] 2025-06-04 06:12:25,826 | INFO     | 
[2025-06-04 02:12:46] 2025-06-04 06:12:25,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 02:12:46] 2025-06-04 06:12:25,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | job 6678152419 has completed (purged errors)
[2025-06-04 02:12:46] 2025-06-04 06:12:25,911 | INFO     | overall cleanup function is called
[2025-06-04 02:12:46] 2025-06-04 06:12:26,918 | INFO     | --- collectZombieJob: --- 10, [91473]
[2025-06-04 02:12:46] 2025-06-04 06:12:26,918 | INFO     | zombie collector waiting for pid 91473
[2025-06-04 02:12:46] 2025-06-04 06:12:26,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:12:46] 2025-06-04 06:12:26,918 | INFO     | collected zombie processes
[2025-06-04 02:12:46] 2025-06-04 06:12:26,919 | INFO     | will attempt to kill all subprocesses of pid=91473
[2025-06-04 02:12:46] 2025-06-04 06:12:27,158 | INFO     | process IDs to be killed: [91473] (in reverse order)
[2025-06-04 02:12:46] 2025-06-04 06:12:27,243 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:12:46] 2025-06-04 06:12:27,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:12:46] 2025-06-04 06:12:27,252 | INFO     | did not find any defunct processes belonging to 91473
[2025-06-04 02:12:46] 2025-06-04 06:12:27,260 | INFO     | did not find any defunct processes belonging to 91473
[2025-06-04 02:12:46] 2025-06-04 06:12:27,260 | INFO     | ready for new job
[2025-06-04 02:12:46] 2025-06-04 06:12:27,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:12:46] 2025-06-04 06:12:27,261 | INFO     | **************************************
[2025-06-04 02:12:46] 2025-06-04 06:12:27,261 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:12:46] 2025-06-04 06:12:27,261 | INFO     | **************************************
[2025-06-04 02:12:46] 2025-06-04 06:12:27,261 | INFO     | 
[2025-06-04 02:12:46] 2025-06-04 06:12:27,265 | INFO     | architecture information:
[2025-06-04 02:12:46] 2025-06-04 06:12:27,266 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:12:46] 2025-06-04 06:12:27,369 | INFO     | cat /etc/os-release:
[2025-06-04 02:12:46] NAME="CentOS Linux"
[2025-06-04 02:12:46] VERSION="7 (Core)"
[2025-06-04 02:12:46] ID="centos"
[2025-06-04 02:12:46] ID_LIKE="rhel fedora"
[2025-06-04 02:12:46] VERSION_ID="7"
[2025-06-04 02:12:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:12:46] ANSI_COLOR="0;31"
[2025-06-04 02:12:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:12:46] HOME_URL="https://www.centos.org/"
[2025-06-04 02:12:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:12:46] 
[2025-06-04 02:12:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:12:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:12:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:12:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:12:46] 
[2025-06-04 02:12:46] 2025-06-04 06:12:27,369 | INFO     | **************************************
[2025-06-04 02:12:46] 2025-06-04 06:12:27,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 02:12:46] 2025-06-04 06:12:27,897 | INFO     | sufficient remaining disk space (104044953600 B)
[2025-06-04 02:12:46] 2025-06-04 06:12:27,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:12:46] 2025-06-04 06:12:27,898 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:12:46] 2025-06-04 06:12:27,898 | INFO     | update_server=False
[2025-06-04 02:12:46] 2025-06-04 06:12:27,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:12:46] 2025-06-04 06:12:27,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:12:46] 2025-06-04 06:12:27,899 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:12:46] 2025-06-04 06:12:27,899 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:12:46] 2025-06-04 06:12:27,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:12:46] 2025-06-04 06:12:27,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:12:46] 2025-06-04 06:12:27,905 | INFO     | all job control threads have been joined
[2025-06-04 02:12:46] 2025-06-04 06:12:28,017 | INFO     | all data control threads have been joined
[2025-06-04 02:12:46] 2025-06-04 06:12:28,058 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:12:46] 2025-06-04 06:12:28,058 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:12:46] 2025-06-04 06:12:28,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:12:46] 2025-06-04 06:12:28,058 | INFO     | will abort loop
[2025-06-04 02:12:46] 2025-06-04 06:12:28,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:12:46] 2025-06-04 06:12:28,857 | INFO     | all payload control threads have been joined
[2025-06-04 02:12:46] 2025-06-04 06:12:28,904 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:28,910 | INFO     | [job] control thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,023 | INFO     | [data] control thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,064 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,243 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,636 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,863 | INFO     | [payload] control thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,876 | INFO     | [job] validate thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:29,941 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:30,005 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:30,095 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:30,159 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:30,735 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:30,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:12:46] 2025-06-04 06:12:31,844 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:31,907 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:38,731 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:12:46] 2025-06-04 06:12:39,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:12:46] 2025-06-04 06:12:40,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566833497920)>', '<ExcThread(monitor, started 140566377502464)>']
[2025-06-04 02:12:46] 2025-06-04 06:12:40,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:12:46] 2025-06-04 06:12:40,968 | INFO     | [monitor] control thread has ended
[2025-06-04 02:12:46] 2025-06-04 06:12:45,723 | INFO     | all workflow threads have been joined
[2025-06-04 02:12:46] 2025-06-04 06:12:45,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:12:46] 2025-06-04 06:12:45,724 | INFO     | traces error code: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:45,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:12:46] 2025-06-04 06:12:45,795 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:12:46] 2025-06-04 06:12:45,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:12:46] 2025-06-04 06:12:45,870 [wrapper] pilotpid: 50385
[2025-06-04 02:12:46] 2025-06-04 06:12:45,910 [wrapper] Pilot exit status: 0
[2025-06-04 02:12:46] 2025-06-04 06:12:46,195 [wrapper] pandaids: 6678152419 6678152419
[2025-06-04 02:12:46] 2025-06-04 06:12:46,242 [wrapper] cleanup supervisor_pilot 58348 50386
[2025-06-04 02:12:46] 2025-06-04 06:12:46,244 [wrapper] Test setup, not cleaning
[2025-06-04 02:12:46] 2025-06-04 06:12:46,246 [wrapper] apfmon messages muted
[2025-06-04 02:12:46] 2025-06-04 06:12:46,247 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:12:46] 2025-06-04 06:12:46,249 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:12:46]  *** Error codes and diagnostics ***
[2025-06-04 02:12:46]     "exeErrorCode": 0,
[2025-06-04 02:12:46]     "exeErrorDiag": "",
[2025-06-04 02:12:46]     "pilotErrorCode": 0,
[2025-06-04 02:12:46]     "pilotErrorDiag": "",
[2025-06-04 02:12:46]  *** Listing of results directory ***
[2025-06-04 02:12:46] total 601012
[2025-06-04 02:12:46] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 02:12:46] -rwx------ 1 boincer umatlas     37140 Jun  3 18:33 runpilot2-wrapper.sh
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:33 queuedata.json
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:12:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:30 run_atlas
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:30 job.xml
[2025-06-04 02:12:46] -rw-r--r-- 3 boincer umatlas 213692681 Jun  3 23:30 EVNT.45006593._001892.pool.root.1
[2025-06-04 02:12:46] -rw-r--r-- 3 boincer umatlas 213692681 Jun  3 23:30 ATLAS.root_0
[2025-06-04 02:12:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:30 start_atlas.sh
[2025-06-04 02:12:46] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:30 shared
[2025-06-04 02:12:46] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 23:30 input.tar.gz
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:30 boinc_lockfile
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas   1603667 Jun  3 23:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 00:30 pandaJob.out
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas    986745 Jun  4 00:30 agis_schedconf.cvmfs.json
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 02:10 init_data.xml
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas 182401347 Jun  4 02:11 HITS.45006595._047196.pool.root.1
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:11 boinc_task_state.xml
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas        96 Jun  4 02:11 pilot_heartbeat.json
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas      1069 Jun  4 02:12 memory_monitor_summary.json
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas    320206 Jun  4 02:12 log.45006595._047196.job.log.tgz.1
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas      7736 Jun  4 02:12 heartbeat.json
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:12 boinc_mmap_file
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:12 wrapper_checkpoint.txt
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas      4735 Jun  4 02:12 pilotlog.txt
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas    579577 Jun  4 02:12 log.45006595._047196.job.log.1
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas       357 Jun  4 02:12 output.list
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:12 runtime_log
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas    921600 Jun  4 02:12 result.tar.gz
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas      8744 Jun  4 02:12 runtime_log.err
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas       783 Jun  4 02:12 7D2KDm6Mpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJAaKDmJaqCEo.diag
[2025-06-04 02:12:46] -rw-r--r-- 1 boincer umatlas     23024 Jun  4 02:12 stderr.txt
[2025-06-04 02:12:46] HITS file was successfully produced:
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas 182401347 Jun  4 02:11 shared/HITS.pool.root.1
[2025-06-04 02:12:46]  *** Contents of shared directory: ***
[2025-06-04 02:12:46] total 388240
[2025-06-04 02:12:46] -rw-r--r-- 3 boincer umatlas 213692681 Jun  3 23:30 ATLAS.root_0
[2025-06-04 02:12:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:30 start_atlas.sh
[2025-06-04 02:12:46] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 23:30 input.tar.gz
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas 182401347 Jun  4 02:11 HITS.pool.root.1
[2025-06-04 02:12:46] -rw------- 1 boincer umatlas    921600 Jun  4 02:12 result.tar.gz
02:12:48 (28714): run_atlas exited; CPU time 30282.688888
02:12:48 (28714): called boinc_finish(0)

</stderr_txt>
]]>

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