Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
14:08:40 (551397): wrapper (7.7.26015): starting
14:08:40 (551397): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 14:08:40] Arguments: --nthreads 4
[2025-06-04 14:08:40] Threads: 4
[2025-06-04 14:08:40] Checking for CVMFS
[2025-06-04 14:08:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:08:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:08:41] 2.12.7.0 5156 2763 60592 146781 0 56 3191143 4096001 0 130560 0 1517948 99.987 630518 1490 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 14:08:41] CVMFS is ok
[2025-06-04 14:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:08:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 14:08:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 14:08:41] Further information can be found at the LHC@home message board.
[2025-06-04 14:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:08:41] Checking for apptainer binary...
[2025-06-04 14:08:41] apptainer is not installed, using version from CVMFS
[2025-06-04 14:08:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:08:41] localhost
[2025-06-04 14:08:41] apptainer works
[2025-06-04 14:08:41] Set ATHENA_PROC_NUMBER=4
[2025-06-04 14:08:41] Set ATHENA_CORE_NUMBER=4
[2025-06-04 14:08:41] Starting ATLAS job with PandaID=6678071174
[2025-06-04 14:08:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:37:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:37:54] 2025-06-04 16:37:34,334 | INFO     | mean y: 2299480.842465753
[2025-06-04 16:37:54] 2025-06-04 16:37:34,334 | INFO     | -- intersect: -71497488206.60037
[2025-06-04 16:37:54] 2025-06-04 16:37:34,334 | INFO     | intersect: -71497488206.60037
[2025-06-04 16:37:54] 2025-06-04 16:37:34,334 | INFO     | chi2: 3.9420484096927413
[2025-06-04 16:37:54] 2025-06-04 16:37:34,334 | INFO     | sum of square deviations: 869188390.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | sum of deviations: 38083733927.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | mean x: 1749050421.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | mean y: 2297308.8936170214
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | -- intersect: -76632839129.44667
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | intersect: -76632839129.44667
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | chi2: 3.9491642782958607
[2025-06-04 16:37:54] 2025-06-04 16:37:34,335 | INFO     | current chi2=3.9491642782958607 (change=-0.18051195377567805 %)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | right removable region: 140
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | sum of square deviations: 869188390.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | sum of deviations: 9868940754.000004
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | mean x: 1749050726.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | mean y: 2346349.0354609927
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | -- intersect: -19856729300.41574
[2025-06-04 16:37:54] 2025-06-04 16:37:34,336 | INFO     | intersect: -19856729300.41574
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | chi2: 1.7744614347874914
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | current chi2=1.7744614347874914 (change=54.98631040591915 %)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | sum of square deviations: 779958810.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | sum of deviations: -12464392086.500002
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | mean x: 1749050878.5
[2025-06-04 16:37:54] 2025-06-04 16:37:34,337 | INFO     | mean y: 2384485.713235294
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | -- intersect: 27953675822.317635
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | intersect: 27953675822.317635
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | chi2: 0.6231933105705135
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | current chi2=0.6231933105705135 (change=64.87986166658241 %)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | sum of square deviations: 697054930.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | sum of deviations: -17781316451.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,338 | INFO     | mean x: 1749051031.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | mean y: 2393836.854961832
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | -- intersect: 44619293499.495346
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | intersect: 44619293499.495346
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | chi2: 0.23722499652331222
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | current chi2=0.23722499652331222 (change=61.93396294543979 %)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | sum of square deviations: 620244187.5
[2025-06-04 16:37:54] 2025-06-04 16:37:34,339 | INFO     | sum of deviations: -10795788082.499996
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | mean x: 1749051183.5
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | mean y: 2379957.277777778
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | -- intersect: 30445850937.022854
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | intersect: 30445850937.022854
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | chi2: 0.18067604262896791
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | current chi2=0.18067604262896791 (change=23.83768773236644 %)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | left removable region: 40
[2025-06-04 16:37:54] 2025-06-04 16:37:34,340 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | sum of deviations: 265472823.49999997
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | mean x: 1749051610.5
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | mean y: 2355222.57
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | -- intersect: -1495216742.0545425
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | intersect: -1495216742.0545425
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | chi2: 0.0008994411742326154
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | -- intersect: -1495216742.0545425
[2025-06-04 16:37:54] 2025-06-04 16:37:34,341 | INFO     | current memory leak: 0.86 B/s (using 100 data points, chi2=0.00)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | ..............................
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . Timing measurements:
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . get job = 0 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . initial setup = 3 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . payload setup = 4 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . stage-in = 0 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . payload execution = 8873 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . stage-out = 0 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | . log creation = 0 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,342 | INFO     | ..............................
[2025-06-04 16:37:54] 2025-06-04 16:37:34,398 | INFO     | 
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | job summary report
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | --------------------------------------------------
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | PanDA job id: 6678071174
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | task id: 45006595
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | errors: (none)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | pilot state: finished 
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | transexitcode: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | exeerrorcode: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | exeerrordiag: 
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | exitcode: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | exitmsg: OK
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | cpuconsumptiontime: 32167 s
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | nevents: 400
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | neventsw: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | pid: 561397
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | pgrp: 561397
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | corecount: 4
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | event service: False
[2025-06-04 16:37:54] 2025-06-04 16:37:34,399 | INFO     | sizes: {0: 2397226, 1: 2397368, 3: 2397574, 11: 2397602, 8880: 2425693, 8881: 2434817, 8885: 2434817, 8911: 2434987}
[2025-06-04 16:37:54] 2025-06-04 16:37:34,400 | INFO     | --------------------------------------------------
[2025-06-04 16:37:54] 2025-06-04 16:37:34,400 | INFO     | 
[2025-06-04 16:37:54] 2025-06-04 16:37:34,400 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 16:37:54] 2025-06-04 16:37:34,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:37:54] 2025-06-04 16:37:34,415 | INFO     | job 6678071174 has completed (purged errors)
[2025-06-04 16:37:54] 2025-06-04 16:37:34,415 | INFO     | overall cleanup function is called
[2025-06-04 16:37:54] 2025-06-04 16:37:35,422 | INFO     | --- collectZombieJob: --- 10, [561397]
[2025-06-04 16:37:54] 2025-06-04 16:37:35,422 | INFO     | zombie collector waiting for pid 561397
[2025-06-04 16:37:54] 2025-06-04 16:37:35,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:37:54] 2025-06-04 16:37:35,422 | INFO     | collected zombie processes
[2025-06-04 16:37:54] 2025-06-04 16:37:35,422 | INFO     | will attempt to kill all subprocesses of pid=561397
[2025-06-04 16:37:54] 2025-06-04 16:37:35,451 | INFO     | process IDs to be killed: [561397] (in reverse order)
[2025-06-04 16:37:54] 2025-06-04 16:37:35,472 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:37:54] 2025-06-04 16:37:35,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:37:54] 2025-06-04 16:37:35,473 | INFO     | did not find any defunct processes belonging to 561397
[2025-06-04 16:37:54] 2025-06-04 16:37:35,474 | INFO     | did not find any defunct processes belonging to 561397
[2025-06-04 16:37:54] 2025-06-04 16:37:35,474 | INFO     | ready for new job
[2025-06-04 16:37:54] 2025-06-04 16:37:35,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | **************************************
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | **************************************
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | 
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | pilot is running in a VM
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | architecture information:
[2025-06-04 16:37:54] 2025-06-04 16:37:35,476 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:37:54] 2025-06-04 16:37:35,485 | INFO     | cat /etc/os-release:
[2025-06-04 16:37:54] NAME="CentOS Linux"
[2025-06-04 16:37:54] VERSION="7 (Core)"
[2025-06-04 16:37:54] ID="centos"
[2025-06-04 16:37:54] ID_LIKE="rhel fedora"
[2025-06-04 16:37:54] VERSION_ID="7"
[2025-06-04 16:37:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:37:54] ANSI_COLOR="0;31"
[2025-06-04 16:37:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:37:54] HOME_URL="https://www.centos.org/"
[2025-06-04 16:37:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:37:54] 
[2025-06-04 16:37:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:37:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:37:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:37:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:37:54] 
[2025-06-04 16:37:54] 2025-06-04 16:37:35,485 | INFO     | **************************************
[2025-06-04 16:37:54] 2025-06-04 16:37:35,988 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 16:37:54] 2025-06-04 16:37:36,003 | INFO     | sufficient remaining disk space (150300786688 B)
[2025-06-04 16:37:54] 2025-06-04 16:37:36,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | INFO     | update_server=False
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:37:54] 2025-06-04 16:37:36,004 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:37:54] 2025-06-04 16:37:36,005 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:37:54] 2025-06-04 16:37:36,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:37:54] 2025-06-04 16:37:36,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:37:54] 2025-06-04 16:37:36,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:37:54] 2025-06-04 16:37:36,016 | INFO     | aborting loop
[2025-06-04 16:37:54] 2025-06-04 16:37:36,278 | INFO     | all job control threads have been joined
[2025-06-04 16:37:54] 2025-06-04 16:37:36,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:37:54] 2025-06-04 16:37:36,981 | INFO     | all payload control threads have been joined
[2025-06-04 16:37:54] 2025-06-04 16:37:37,009 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,009 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,019 | INFO     | all data control threads have been joined
[2025-06-04 16:37:54] 2025-06-04 16:37:37,021 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,284 | INFO     | [job] control thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,489 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,849 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:37,986 | INFO     | [payload] control thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,007 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,023 | INFO     | [data] control thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,033 | INFO     | [job] validate thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,201 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,202 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,301 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:38,526 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:40,967 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:46,089 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:37:54] 2025-06-04 16:37:47,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:37:54] 2025-06-04 16:37:49,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677598676800)>', '<ExcThread(monitor, started 139677025691392)>']
[2025-06-04 16:37:54] 2025-06-04 16:37:50,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:37:54] 2025-06-04 16:37:50,076 | INFO     | [monitor] control thread has ended
[2025-06-04 16:37:54] 2025-06-04 16:37:54,159 | INFO     | all workflow threads have been joined
[2025-06-04 16:37:54] 2025-06-04 16:37:54,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:37:54] 2025-06-04 16:37:54,159 | INFO     | traces error code: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:54,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:37:54] 2025-06-04 16:37:54,224 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:37:54] 2025-06-04 16:37:54,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:37:54] 2025-06-04 16:37:54,228 [wrapper] pilotpid: 554981
[2025-06-04 16:37:54] 2025-06-04 16:37:54,229 [wrapper] Pilot exit status: 0
[2025-06-04 16:37:54] 2025-06-04 16:37:54,237 [wrapper] pandaids: 6678071174
[2025-06-04 16:37:54] 2025-06-04 16:37:54,252 [wrapper] cleanup supervisor_pilot  577662 554982
[2025-06-04 16:37:54] 2025-06-04 16:37:54,254 [wrapper] Test setup, not cleaning
[2025-06-04 16:37:54] 2025-06-04 16:37:54,256 [wrapper] apfmon messages muted
[2025-06-04 16:37:54] 2025-06-04 16:37:54,257 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:37:54] 2025-06-04 16:37:54,259 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:37:54]  *** Error codes and diagnostics ***
[2025-06-04 16:37:54]     "exeErrorCode": 0,
[2025-06-04 16:37:54]     "exeErrorDiag": "",
[2025-06-04 16:37:54]     "pilotErrorCode": 0,
[2025-06-04 16:37:54]     "pilotErrorDiag": "",
[2025-06-04 16:37:54]  *** Listing of results directory ***
[2025-06-04 16:37:54] total 391856
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:36 pilot3.tar.gz
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:38 queuedata.json
[2025-06-04 16:37:54] -rwx------ 1 boinc boinc     37140 Jun  3 20:39 runpilot2-wrapper.sh
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:37:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:08 run_atlas
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:08 job.xml
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc      6440 Jun  4 14:08 init_data.xml
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc 215309956 Jun  4 14:08 EVNT.45006593._001807.pool.root.1
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:08 start_atlas.sh
[2025-06-04 16:37:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:08 shared
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:08 input.tar.gz
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:08 boinc_lockfile
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc      2524 Jun  4 14:08 pandaJob.out
[2025-06-04 16:37:54] -rw------- 1 boinc boinc    986819 Jun  4 14:08 agis_schedconf.cvmfs.json
[2025-06-04 16:37:54] -rw------- 1 boinc boinc   1598969 Jun  4 14:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:37:54] drwx------ 4 boinc boinc      4096 Jun  4 14:08 pilot3
[2025-06-04 16:37:54] -rw------- 1 boinc boinc 179941538 Jun  4 16:36 HITS.45006595._045036.pool.root.1
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc       529 Jun  4 16:36 boinc_task_state.xml
[2025-06-04 16:37:54] -rw------- 1 boinc boinc      1009 Jun  4 16:37 memory_monitor_summary.json
[2025-06-04 16:37:54] -rw------- 1 boinc boinc    263403 Jun  4 16:37 log.45006595._045036.job.log.tgz.1
[2025-06-04 16:37:54] -rw------- 1 boinc boinc        95 Jun  4 16:37 pilot_heartbeat.json
[2025-06-04 16:37:54] -rw------- 1 boinc boinc      7629 Jun  4 16:37 heartbeat.json
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:37 wrapper_checkpoint.txt
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:37 boinc_mmap_file
[2025-06-04 16:37:54] -rw------- 1 boinc boinc      4611 Jun  4 16:37 pilotlog.txt
[2025-06-04 16:37:54] -rw------- 1 boinc boinc    824672 Jun  4 16:37 log.45006595._045036.job.log.1
[2025-06-04 16:37:54] -rw------- 1 boinc boinc       357 Jun  4 16:37 output.list
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:37 runtime_log
[2025-06-04 16:37:54] -rw------- 1 boinc boinc   1105920 Jun  4 16:37 result.tar.gz
[2025-06-04 16:37:54] -rw------- 1 boinc boinc       647 Jun  4 16:37 T1gNDmObng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms4lKDmfCZ7Zn.diag
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc      8620 Jun  4 16:37 runtime_log.err
[2025-06-04 16:37:54] -rw-r--r-- 1 boinc boinc     20819 Jun  4 16:37 stderr.txt
[2025-06-04 16:37:54] HITS file was successfully produced:
[2025-06-04 16:37:54] -rw------- 1 boinc boinc 179941538 Jun  4 16:36 shared/HITS.pool.root.1
[2025-06-04 16:37:54]  *** Contents of shared directory: ***
[2025-06-04 16:37:54] total 387596
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc 215309956 Jun  4 14:08 ATLAS.root_0
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:08 start_atlas.sh
[2025-06-04 16:37:54] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:08 input.tar.gz
[2025-06-04 16:37:54] -rw------- 1 boinc boinc 179941538 Jun  4 16:36 HITS.pool.root.1
[2025-06-04 16:37:54] -rw------- 1 boinc boinc   1105920 Jun  4 16:37 result.tar.gz
16:37:56 (551397): run_atlas exited; CPU time 32196.189886
16:37:56 (551397): called boinc_finish(0)

</stderr_txt>
]]>

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