Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:19:53 (3685547): wrapper (7.7.26015): starting
20:19:53 (3685547): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:19:53] Arguments: --nthreads 12
[2025-06-03 20:19:53] Threads: 12
[2025-06-03 20:19:53] Checking for CVMFS
[2025-06-03 20:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:19:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:19:54] 2.11.5.0 3603591 23093 221892 146766 3 458 26934109 45568001 11888 130560 0 241785261 99.814 141274042 27365 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 20:19:54] CVMFS is ok
[2025-06-03 20:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:19:54] Further information can be found at the LHC@home message board.
[2025-06-03 20:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:19:54] Checking for apptainer binary...
[2025-06-03 20:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:19:54] Running /usr/bin/apptainer --version
[2025-06-03 20:19:54] apptainer version 1.4.0-1.el9
[2025-06-03 20:19:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:19:54] wns0063.triumf.lcg
[2025-06-03 20:19:54] apptainer works
[2025-06-03 20:19:54] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:19:54] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:19:54] Starting ATLAS job with PandaID=6678244499
[2025-06-03 20:19:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:22:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | found no stored workdir sizes
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | wrong length of table data, x=[1749007226.0], y=[1115.0] (must be same and length>=4)
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . Timing measurements:
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . get job = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . initial setup = 2 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload setup = 4 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-in = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload execution = 17 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-out = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . log creation = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678244499/pilotlog.txt
[2025-06-03 20:22:59] 2025-06-04 03:22:44,876 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 20:22:59] - Log from pilotlog.txt -
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | INFO     | extracted standard info from prmon json
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | found no stored workdir sizes
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | wrong length of table data, x=[1749007226.0], y=[1115.0] (must be same and length>=4)
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . Timing measurements:
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . get job = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . initial setup = 2 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload setup = 4 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-in = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload execution = 17 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-out = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . log creation = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678244499/pilotlog.txt
[2025-06-03 20:22:59] 2025-06-04 03:22:44,877 | WARNING  | 
[2025-06-03 20:22:59] [begin log extracts]
[2025-06-03 20:22:59] - Log from pilotlog.txt -
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | INFO     | extracted standard info from prmon json
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:22:59] 2025-06-04 03:22:44,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | found no stored workdir sizes
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:22:59] 2025-06-04 03:22:44,861 | WARNING  | wrong length of table data, x=[1749007226.0], y=[1115.0] (must be same and length>=4)
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . Timing measurements:
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . get job = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . initial setup = 2 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload setup = 4 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-in = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . payload execution = 17 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . stage-out = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | . log creation = 0 s
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | ..............................
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:22:59] 2025-06-04 03:22:44,862 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678244499/pilotlog.txt
[2025-06-03 20:22:59] [end log extracts]
[2025-06-03 20:22:59] 2025-06-04 03:22:44,878 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 20:22:59] 2025-06-04 03:22:44,879 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | 
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | job summary report
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | --------------------------------------------------
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | PanDA job id: 6678244499
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | task id: 45006595
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 20:20:34,564 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | pilot state: failed 
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | transexitcode: 65
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | exeerrorcode: 65
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | exitcode: 65
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:22:59] 2025-06-04 03:22:45,160 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | nevents: 0
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | neventsw: 0
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | pid: 3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | pgrp: 3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | corecount: 12
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | event service: False
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | sizes: {0: 2405181, 3: 2405387, 11: 2405415, 25: 2432827, 28: 2432827, 148: 2432969}
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | --------------------------------------------------
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | 
[2025-06-03 20:22:59] 2025-06-04 03:22:45,161 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | job 6678244499 has completed (purged errors)
[2025-06-03 20:22:59] 2025-06-04 03:22:45,198 | INFO     | overall cleanup function is called
[2025-06-03 20:22:59] 2025-06-04 03:22:46,206 | INFO     | --- collectZombieJob: --- 10, [3696148]
[2025-06-03 20:22:59] 2025-06-04 03:22:46,206 | INFO     | zombie collector waiting for pid 3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:46,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:22:59] 2025-06-04 03:22:46,206 | INFO     | collected zombie processes
[2025-06-03 20:22:59] 2025-06-04 03:22:46,206 | INFO     | will attempt to kill all subprocesses of pid=3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:46,425 | INFO     | process IDs to be killed: [3696148] (in reverse order)
[2025-06-03 20:22:59] 2025-06-04 03:22:46,538 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:22:59] 2025-06-04 03:22:46,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:22:59] 2025-06-04 03:22:46,548 | INFO     | did not find any defunct processes belonging to 3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:46,556 | INFO     | did not find any defunct processes belonging to 3696148
[2025-06-03 20:22:59] 2025-06-04 03:22:46,556 | INFO     | ready for new job
[2025-06-03 20:22:59] 2025-06-04 03:22:46,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:22:59] 2025-06-04 03:22:46,558 | INFO     | **************************************
[2025-06-03 20:22:59] 2025-06-04 03:22:46,558 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:22:59] 2025-06-04 03:22:46,558 | INFO     | **************************************
[2025-06-03 20:22:59] 2025-06-04 03:22:46,558 | INFO     | 
[2025-06-03 20:22:59] 2025-06-04 03:22:46,560 | INFO     | architecture information:
[2025-06-03 20:22:59] 2025-06-04 03:22:46,560 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:22:59] 2025-06-04 03:22:46,572 | INFO     | cat /etc/os-release:
[2025-06-03 20:22:59] NAME="CentOS Linux"
[2025-06-03 20:22:59] VERSION="7 (Core)"
[2025-06-03 20:22:59] ID="centos"
[2025-06-03 20:22:59] ID_LIKE="rhel fedora"
[2025-06-03 20:22:59] VERSION_ID="7"
[2025-06-03 20:22:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:22:59] ANSI_COLOR="0;31"
[2025-06-03 20:22:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:22:59] HOME_URL="https://www.centos.org/"
[2025-06-03 20:22:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:22:59] 
[2025-06-03 20:22:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:22:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:22:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:22:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:22:59] 
[2025-06-03 20:22:59] 2025-06-04 03:22:46,573 | INFO     | **************************************
[2025-06-03 20:22:59] 2025-06-04 03:22:47,075 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 20:22:59] 2025-06-04 03:22:47,090 | INFO     | sufficient remaining disk space (1924935974912 B)
[2025-06-03 20:22:59] 2025-06-04 03:22:47,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:22:59] 2025-06-04 03:22:47,091 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:22:59] 2025-06-04 03:22:47,091 | INFO     | update_server=False
[2025-06-03 20:22:59] 2025-06-04 03:22:47,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:22:59] 2025-06-04 03:22:47,171 | INFO     | all data control threads have been joined
[2025-06-03 20:22:59] 2025-06-04 03:22:47,419 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:22:59] 2025-06-04 03:22:47,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:22:59] 2025-06-04 03:22:47,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:22:59] 2025-06-04 03:22:47,428 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:22:59] 2025-06-04 03:22:47,428 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:22:59] 2025-06-04 03:22:47,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:22:59] 2025-06-04 03:22:47,428 | INFO     | will abort loop
[2025-06-03 20:22:59] 2025-06-04 03:22:48,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:22:59] 2025-06-04 03:22:48,097 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:48,176 | INFO     | [data] control thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:48,194 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:48,349 | INFO     | all job control threads have been joined
[2025-06-03 20:22:59] 2025-06-04 03:22:48,406 | INFO     | all payload control threads have been joined
[2025-06-03 20:22:59] 2025-06-04 03:22:48,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:22:59] 2025-06-04 03:22:48,424 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:48,433 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,236 | INFO     | [job] validate thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,288 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,355 | INFO     | [job] control thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,372 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,411 | INFO     | [payload] control thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,454 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,548 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:49,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:22:59] 2025-06-04 03:22:50,058 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:50,969 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:52,413 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:22:59] 2025-06-04 03:22:54,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539382081344)>', '<ExcThread(monitor, started 140538552502016)>']
[2025-06-03 20:22:59] 2025-06-04 03:22:54,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:22:59] 2025-06-04 03:22:54,456 | INFO     | [monitor] control thread has ended
[2025-06-03 20:22:59] 2025-06-04 03:22:59,281 | INFO     | all workflow threads have been joined
[2025-06-03 20:22:59] 2025-06-04 03:22:59,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:22:59] 2025-06-04 03:22:59,281 | INFO     | traces error code: 0
[2025-06-03 20:22:59] 2025-06-04 03:22:59,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:22:59] 2025-06-04 03:22:59,457 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:22:59] 2025-06-04 03:22:59,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:22:59] 2025-06-04 03:22:59,462 [wrapper] pilotpid: 3689142
[2025-06-03 20:22:59] 2025-06-04 03:22:59,465 [wrapper] Pilot exit status: 0
[2025-06-03 20:22:59] 2025-06-04 03:22:59,474 [wrapper] pandaids: 6678244499
[2025-06-03 20:22:59] 2025-06-04 03:22:59,533 [wrapper] cleanup supervisor_pilot 3689148 3689143
[2025-06-03 20:22:59] 2025-06-04 03:22:59,536 [wrapper] Test setup, not cleaning
[2025-06-03 20:22:59] 2025-06-04 03:22:59,538 [wrapper] apfmon messages muted
[2025-06-03 20:22:59] 2025-06-04 03:22:59,540 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:22:59] 2025-06-04 03:22:59,543 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:22:59]  *** Error codes and diagnostics ***
[2025-06-03 20:22:59]     "exeErrorCode": 65,
[2025-06-03 20:22:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:22:59]     "pilotErrorCode": 1305,
[2025-06-03 20:22:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:22:59]  *** Listing of results directory ***
[2025-06-03 20:22:59] total 213980
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:58 pilot3.tar.gz
[2025-06-03 20:22:59] -rwx------. 1 boinc boinc     37140 Jun  3 17:57 runpilot2-wrapper.sh
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:57 queuedata.json
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:22:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:19 run_atlas
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:19 job.xml
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc      6601 Jun  3 20:19 init_data.xml
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc 215094398 Jun  3 20:19 EVNT.45006593._001985.pool.root.1
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:19 start_atlas.sh
[2025-06-03 20:22:59] drwxrwx--x. 2 boinc boinc      4096 Jun  3 20:19 shared
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc    508878 Jun  3 20:19 input.tar.gz
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:19 boinc_lockfile
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc      2525 Jun  3 20:19 pandaJob.out
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc    986077 Jun  3 20:19 agis_schedconf.cvmfs.json
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc   1603667 Jun  3 20:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:22:59] drwx------. 4 boinc boinc      4096 Jun  3 20:20 pilot3
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc       522 Jun  3 20:20 boinc_task_state.xml
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc       973 Jun  3 20:20 memory_monitor_summary.json
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc     20397 Jun  3 20:20 log.45006595._049504.job.log.tgz.1
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc        95 Jun  3 20:22 pilot_heartbeat.json
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc      8327 Jun  3 20:22 heartbeat.json
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:22 boinc_mmap_file
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc        22 Jun  3 20:22 wrapper_checkpoint.txt
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc      4538 Jun  3 20:22 pilotlog.txt
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc     72891 Jun  3 20:22 log.45006595._049504.job.log.1
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc       188 Jun  3 20:22 output.list
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:22 runtime_log
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc    112640 Jun  3 20:22 result.tar.gz
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc      8484 Jun  3 20:22 runtime_log.err
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc       644 Jun  3 20:22 pGCNDmUcrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuimKDmQsKmCn.diag
[2025-06-03 20:22:59] -rw-r--r--. 1 boinc boinc     21449 Jun  3 20:22 stderr.txt
[2025-06-03 20:22:59] No HITS result produced
[2025-06-03 20:22:59]  *** Contents of shared directory: ***
[2025-06-03 20:22:59] total 210688
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc 215094398 Jun  3 20:19 ATLAS.root_0
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:19 start_atlas.sh
[2025-06-03 20:22:59] -rw-r--r--. 2 boinc boinc    508878 Jun  3 20:19 input.tar.gz
[2025-06-03 20:22:59] -rw-------. 1 boinc boinc    112640 Jun  3 20:22 result.tar.gz
20:23:01 (3685547): run_atlas exited; CPU time 20.160224
20:23:01 (3685547): called boinc_finish(0)

</stderr_txt>
]]>

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