Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:10:05 (25607): wrapper (7.7.26015): starting
23:10:05 (25607): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:10:05] Arguments: --nthreads 12
[2025-06-03 23:10:05] Threads: 12
[2025-06-03 23:10:05] Checking for CVMFS
[2025-06-03 23:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:10:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:10:05] 2.11.2.0 2979 35124 93596 146765 2 58 18329467 20275201 1 130560 0 15244093 99.982 6031409 7333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 23:10:05] CVMFS is ok
[2025-06-03 23:10:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:10:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:10:05] Further information can be found at the LHC@home message board.
[2025-06-03 23:10:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:10:05] Checking for apptainer binary...
[2025-06-03 23:10:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:10:05] Running /usr/bin/apptainer --version
[2025-06-03 23:10:05] apptainer version 1.3.2-1.el7
[2025-06-03 23:10:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:10:07] c-205-7.aglt2.org
[2025-06-03 23:10:07] apptainer works
[2025-06-03 23:10:07] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:10:07] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:10:07] Starting ATLAS job with PandaID=6678152283
[2025-06-03 23:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:17:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:17:37]  guid=767ed5b0-95d4-4d91-8628-b5009b99a794
[2025-06-04 00:17:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 00:17:37]  is_altstaged=None
[2025-06-04 00:17:37]  is_tar=False
[2025-06-04 00:17:37]  lfn=log.45006595._047060.job.log.tgz.1
[2025-06-04 00:17:37]  mtime=0
[2025-06-04 00:17:37]  protocol_id=None
[2025-06-04 00:17:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:17:37]  replicas=None
[2025-06-04 00:17:37]  scope=mc23_13p6TeV
[2025-06-04 00:17:37]  status=None
[2025-06-04 00:17:37]  status_code=0
[2025-06-04 00:17:37]  storage_token=
[2025-06-04 00:17:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678152283/log.45006595._047060.job.log.tgz.1
[2025-06-04 00:17:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/6b/log.45006595._047060.job.log.tgz.1
[2025-06-04 00:17:37]  workdir=None
[2025-06-04 00:17:37] ]
[2025-06-04 00:17:37] 2025-06-04 04:17:15,028 | INFO     | transferring file log.45006595._047060.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678152283/log.45006595._047060.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:17:37] 2025-06-04 04:17:15,029 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678152283/log.45006595._047060.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047060.job
[2025-06-04 00:17:37] 2025-06-04 04:17:15,050 | INFO     | adding to output.list: log.45006595._047060.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/6b/log.45006595._047060.job.log.tg
[2025-06-04 00:17:37] 2025-06-04 04:17:15,051 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:17:37] 2025-06-04 04:17:15,051 | INFO     | summary of transferred files:
[2025-06-04 00:17:37] 2025-06-04 04:17:15,052 | INFO     |  -- lfn=log.45006595._047060.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:17:37] 2025-06-04 04:17:15,052 | INFO     | stage-out finished correctly
[2025-06-04 00:17:37] 2025-06-04 04:17:15,968 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:17:37] 2025-06-04 04:17:16,580 | INFO     | monitor loop #300: job 0:6678152283 is in state 'finished'
[2025-06-04 00:17:37] 2025-06-04 04:17:16,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:17:37] 2025-06-04 04:17:17,681 | INFO     | job 6678152283 has state=finished
[2025-06-04 00:17:37] 2025-06-04 04:17:17,681 | INFO     | preparing for final server update for job 6678152283 in state='finished'
[2025-06-04 00:17:37] 2025-06-04 04:17:17,681 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:17:37] 2025-06-04 04:17:17,682 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:17:37] 2025-06-04 04:17:17,682 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:17:37] 2025-06-04 04:17:17,682 | INFO     | job 6678152283 has finished - writing final server update
[2025-06-04 00:17:37] 2025-06-04 04:17:17,682 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:17:37] 2025-06-04 04:17:17,684 | INFO     | executing command: lscpu
[2025-06-04 00:17:37] 2025-06-04 04:17:17,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:17:37] 2025-06-04 04:17:19,084 | INFO     | monitor loop #301: job 0:6678152283 is in state 'finished'
[2025-06-04 00:17:37] 2025-06-04 04:17:19,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:17:37] 2025-06-04 04:17:21,587 | INFO     | monitor loop #302: job 0:6678152283 is in state 'finished'
[2025-06-04 00:17:37] 2025-06-04 04:17:21,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,503 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 00:17:37] 2025-06-04 04:17:22,503 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152283/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,504 | INFO     | extracted standard info from prmon json
[2025-06-04 00:17:37] 2025-06-04 04:17:22,505 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:17:37] 2025-06-04 04:17:22,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:17:37] 2025-06-04 04:17:22,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:17:37] 2025-06-04 04:17:22,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:17:37] 2025-06-04 04:17:22,507 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:17:37] 2025-06-04 04:17:22,508 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,508 | INFO     | sum of deviations: 1737336974.0000002
[2025-06-04 00:17:37] 2025-06-04 04:17:22,508 | INFO     | mean x: 1749008725.0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,508 | INFO     | mean y: 2655947.86440678
[2025-06-04 00:17:37] 2025-06-04 04:17:22,508 | INFO     | -- intersect: -47724588269.541916
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | intersect: -47724588269.541916
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | chi2: 0.007442420895020787
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | -- intersect: -47724588269.541916
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | current memory leak: 27.29 B/s (using 59 data points, chi2=0.01)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | ..............................
[2025-06-04 00:17:37] 2025-06-04 04:17:22,509 | INFO     | . Timing measurements:
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . get job = 0 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . initial setup = 2 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . payload setup = 9 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . stage-in = 0 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . payload execution = 3984 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . stage-out = 0 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | . log creation = 0 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,510 | INFO     | ..............................
[2025-06-04 00:17:37] 2025-06-04 04:17:22,594 | INFO     | 
[2025-06-04 00:17:37] 2025-06-04 04:17:22,594 | INFO     | job summary report
[2025-06-04 00:17:37] 2025-06-04 04:17:22,594 | INFO     | --------------------------------------------------
[2025-06-04 00:17:37] 2025-06-04 04:17:22,594 | INFO     | PanDA job id: 6678152283
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | task id: 45006595
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | errors: (none)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | pilot state: finished 
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | transexitcode: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,595 | INFO     | exeerrorcode: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | exeerrordiag: 
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | exitcode: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | exitmsg: OK
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | cpuconsumptiontime: 42546 s
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | nevents: 400
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | neventsw: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | pid: 3475
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | pgrp: 3475
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | corecount: 12
[2025-06-04 00:17:37] 2025-06-04 04:17:22,596 | INFO     | event service: False
[2025-06-04 00:17:37] 2025-06-04 04:17:22,597 | INFO     | sizes: {0: 2405181, 5: 2405387, 11: 2405443, 3998: 2431156, 3999: 2440097, 4000: 2440153, 4007: 2440451}
[2025-06-04 00:17:37] 2025-06-04 04:17:22,597 | INFO     | --------------------------------------------------
[2025-06-04 00:17:37] 2025-06-04 04:17:22,597 | INFO     | 
[2025-06-04 00:17:37] 2025-06-04 04:17:22,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 00:17:37] 2025-06-04 04:17:22,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:17:37] 2025-06-04 04:17:22,623 | INFO     | job 6678152283 has completed (purged errors)
[2025-06-04 00:17:37] 2025-06-04 04:17:22,623 | INFO     | overall cleanup function is called
[2025-06-04 00:17:37] 2025-06-04 04:17:23,632 | INFO     | --- collectZombieJob: --- 10, [3475]
[2025-06-04 00:17:37] 2025-06-04 04:17:23,632 | INFO     | zombie collector waiting for pid 3475
[2025-06-04 00:17:37] 2025-06-04 04:17:23,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:17:37] 2025-06-04 04:17:23,632 | INFO     | collected zombie processes
[2025-06-04 00:17:37] 2025-06-04 04:17:23,632 | INFO     | will attempt to kill all subprocesses of pid=3475
[2025-06-04 00:17:37] 2025-06-04 04:17:23,721 | INFO     | process IDs to be killed: [3475] (in reverse order)
[2025-06-04 00:17:37] 2025-06-04 04:17:23,777 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:17:37] 2025-06-04 04:17:23,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:17:37] 2025-06-04 04:17:23,781 | INFO     | did not find any defunct processes belonging to 3475
[2025-06-04 00:17:37] 2025-06-04 04:17:23,785 | INFO     | did not find any defunct processes belonging to 3475
[2025-06-04 00:17:37] 2025-06-04 04:17:23,785 | INFO     | ready for new job
[2025-06-04 00:17:37] 2025-06-04 04:17:23,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:17:37] 2025-06-04 04:17:23,787 | INFO     | **************************************
[2025-06-04 00:17:37] 2025-06-04 04:17:23,787 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:17:37] 2025-06-04 04:17:23,787 | INFO     | **************************************
[2025-06-04 00:17:37] 2025-06-04 04:17:23,787 | INFO     | 
[2025-06-04 00:17:37] 2025-06-04 04:17:23,788 | INFO     | architecture information:
[2025-06-04 00:17:37] 2025-06-04 04:17:23,788 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:17:37] 2025-06-04 04:17:23,803 | INFO     | cat /etc/os-release:
[2025-06-04 00:17:37] NAME="CentOS Linux"
[2025-06-04 00:17:37] VERSION="7 (Core)"
[2025-06-04 00:17:37] ID="centos"
[2025-06-04 00:17:37] ID_LIKE="rhel fedora"
[2025-06-04 00:17:37] VERSION_ID="7"
[2025-06-04 00:17:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:17:37] ANSI_COLOR="0;31"
[2025-06-04 00:17:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:17:37] HOME_URL="https://www.centos.org/"
[2025-06-04 00:17:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:17:37] 
[2025-06-04 00:17:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:17:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:17:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:17:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:17:37] 
[2025-06-04 00:17:37] 2025-06-04 04:17:23,803 | INFO     | **************************************
[2025-06-04 00:17:37] 2025-06-04 04:17:24,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:17:37] 2025-06-04 04:17:24,323 | INFO     | sufficient remaining disk space (29413605376 B)
[2025-06-04 00:17:37] 2025-06-04 04:17:24,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:17:37] 2025-06-04 04:17:24,323 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:17:37] 2025-06-04 04:17:24,324 | INFO     | update_server=False
[2025-06-04 00:17:37] 2025-06-04 04:17:24,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:17:37] 2025-06-04 04:17:24,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:17:37] 2025-06-04 04:17:24,324 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:17:37] 2025-06-04 04:17:24,325 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:17:37] 2025-06-04 04:17:24,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:17:37] 2025-06-04 04:17:24,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:17:37] 2025-06-04 04:17:24,839 | INFO     | all job control threads have been joined
[2025-06-04 00:17:37] 2025-06-04 04:17:25,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:17:37] 2025-06-04 04:17:25,115 | INFO     | aborting loop
[2025-06-04 00:17:37] 2025-06-04 04:17:25,222 | INFO     | all data control threads have been joined
[2025-06-04 00:17:37] 2025-06-04 04:17:25,306 | INFO     | all payload control threads have been joined
[2025-06-04 00:17:37] 2025-06-04 04:17:25,329 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:25,330 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:25,583 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:25,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:17:37] 2025-06-04 04:17:25,689 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:25,844 | INFO     | [job] control thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,120 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,227 | INFO     | [data] control thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,244 | INFO     | [job] validate thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,244 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,250 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,311 | INFO     | [payload] control thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,435 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:26,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:17:37] 2025-06-04 04:17:26,710 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:27,655 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:30,564 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:17:37] 2025-06-04 04:17:32,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279598319424)>', '<ExcThread(monitor, started 140278799267584)>']
[2025-06-04 00:17:37] 2025-06-04 04:17:33,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:17:37] 2025-06-04 04:17:33,372 | INFO     | [monitor] control thread has ended
[2025-06-04 00:17:37] 2025-06-04 04:17:37,676 | INFO     | all workflow threads have been joined
[2025-06-04 00:17:37] 2025-06-04 04:17:37,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:17:37] 2025-06-04 04:17:37,685 | INFO     | traces error code: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:37,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:17:37] 2025-06-04 04:17:37,778 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:17:37] 2025-06-04 04:17:37,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:17:37] 2025-06-04 04:17:37,786 [wrapper] pilotpid: 29236
[2025-06-04 00:17:37] 2025-06-04 04:17:37,790 [wrapper] Pilot exit status: 0
[2025-06-04 00:17:37] 2025-06-04 04:17:37,806 [wrapper] pandaids: 6678152283
[2025-06-04 00:17:37] 2025-06-04 04:17:37,845 [wrapper] cleanup supervisor_pilot  2059 29237
[2025-06-04 00:17:37] 2025-06-04 04:17:37,849 [wrapper] Test setup, not cleaning
[2025-06-04 00:17:37] 2025-06-04 04:17:37,853 [wrapper] apfmon messages muted
[2025-06-04 00:17:37] 2025-06-04 04:17:37,857 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:17:37] 2025-06-04 04:17:37,861 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:17:37]  *** Error codes and diagnostics ***
[2025-06-04 00:17:37]     "exeErrorCode": 0,
[2025-06-04 00:17:37]     "exeErrorDiag": "",
[2025-06-04 00:17:37]     "pilotErrorCode": 0,
[2025-06-04 00:17:37]     "pilotErrorDiag": "",
[2025-06-04 00:17:37]  *** Listing of results directory ***
[2025-06-04 00:17:37] total 395868
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 00:17:37] -rwx------ 1 boincer umatlas     37140 Jun  3 18:32 runpilot2-wrapper.sh
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:32 queuedata.json
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas       100 Jun  3 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:17:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 23:10 run_atlas
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas       105 Jun  3 23:10 job.xml
[2025-06-04 00:17:37] -rw-r--r-- 2 boincer umatlas 217569091 Jun  3 23:10 EVNT.45006593._001887.pool.root.1
[2025-06-04 00:17:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:10 start_atlas.sh
[2025-06-04 00:17:37] drwxrwx--x 2 boincer umatlas      4096 Jun  3 23:10 shared
[2025-06-04 00:17:37] -rw-r--r-- 2 boincer umatlas    508872 Jun  3 23:10 input.tar.gz
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas         0 Jun  3 23:10 boinc_lockfile
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas      2523 Jun  3 23:10 pandaJob.out
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas    986077 Jun  3 23:10 agis_schedconf.cvmfs.json
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas   1603667 Jun  3 23:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:17:37] drwx------ 4 boincer umatlas      4096 Jun  3 23:10 pilot3
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 00:09 init_data.xml
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas 182495070 Jun  4 00:16 HITS.45006595._047060.pool.root.1
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas       529 Jun  4 00:17 boinc_task_state.xml
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas      1050 Jun  4 00:17 memory_monitor_summary.json
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas        95 Jun  4 00:17 pilot_heartbeat.json
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas    343807 Jun  4 00:17 log.45006595._047060.job.log.tgz.1
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas      7747 Jun  4 00:17 heartbeat.json
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas        27 Jun  4 00:17 wrapper_checkpoint.txt
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 00:17 boinc_mmap_file
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas      4476 Jun  4 00:17 pilotlog.txt
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas    389867 Jun  4 00:17 log.45006595._047060.job.log.1
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas       357 Jun  4 00:17 output.list
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas       620 Jun  4 00:17 runtime_log
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas    757760 Jun  4 00:17 result.tar.gz
[2025-06-04 00:17:37] -rw------- 1 boincer umatlas       658 Jun  4 00:17 sgVLDmDMpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDml9ZKDmH3V8No.diag
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 00:17 runtime_log.err
[2025-06-04 00:17:37] -rw-r--r-- 1 boincer umatlas     21298 Jun  4 00:17 stderr.txt
[2025-06-04 00:17:38] HITS file was successfully produced:
[2025-06-04 00:17:38] -rw------- 1 boincer umatlas 182495070 Jun  4 00:16 shared/HITS.pool.root.1
[2025-06-04 00:17:38]  *** Contents of shared directory: ***
[2025-06-04 00:17:38] total 391952
[2025-06-04 00:17:38] -rw-r--r-- 2 boincer umatlas 217569091 Jun  3 23:10 ATLAS.root_0
[2025-06-04 00:17:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 23:10 start_atlas.sh
[2025-06-04 00:17:38] -rw-r--r-- 2 boincer umatlas    508872 Jun  3 23:10 input.tar.gz
[2025-06-04 00:17:38] -rw------- 1 boincer umatlas 182495070 Jun  4 00:16 HITS.pool.root.1
[2025-06-04 00:17:38] -rw------- 1 boincer umatlas    757760 Jun  4 00:17 result.tar.gz
00:17:39 (25607): run_atlas exited; CPU time 42527.664795
00:17:39 (25607): called boinc_finish(0)

</stderr_txt>
]]>

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